Haloferax gibbonsii: ABY42_09520
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Entry
ABY42_09520 CDS
T04025
Name
(GenBank) bacterio-opsin activator
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hgi
Haloferax gibbonsii
Brite
KEGG Orthology (KO) [BR:
hgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hgi03000
]
ABY42_09520
Transcription factors [BR:
hgi03000
]
Prokaryotic type
Helix-turn-helix
Other families
ABY42_09520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
GAF
PAS
GAF_2
PAS_4
HTH_10
PAS_9
PAS_8
GAF_3
PAS_7
HTH_20
Response_reg
Motif
Other DBs
NCBI-ProteinID:
AKU09080
UniProt:
A0A0K1IXM5
LinkDB
All DBs
Position
complement(1827629..1830841)
Genome browser
AA seq
1070 aa
AA seq
DB search
MSDDGEFAASLDSSLSSLDGATTVRHVRTPAAARAELVSASAAISCIVLAAPTAAGDEGA
FVRDIYAQGIDVPVVVAAADQETATRAVEAGATDYVVRDDDPETMSWLAFRVERALGECT
LARSHRDRIEQQRVVSEIGTRALTAVDLDSTLDHAASRVRDVLDASSVTIFEGLDDGAFR
VAAAAGWSANRDHGLAAAGGTQAVETYRSGRSTLVDDFDDDERFEHASDAGPSGPKSGMS
AAIGGDDTRWGVIAVHGVASGQFSDDDVLFLENIAAVVGAATERHELKSALSEVLERMDE
AVMGFDADWRVTYVNSTAEHGLGMSAEAVLGTRIWDSVPESAVFREEFERAMERQEPATF
EQYYDRLETWYAVRAYPSETGLSVYFTDITEQLEHEVEAEQYGRMLAAVADAVYALDDEG
RFAAVNPAFERLTGLDRDRVIGSSTALLTENASATDGSDEAFASTSQGIVELDLRTPDEG
VVRVEDHRTPLVVGGEEVGSVGVLRDVTKRHRYERLLATLHDRTREMMGATDRQAVLRAA
VDACDEVLGDARTELFVFDEADTSLVRVGAAGTGLGDKPVGGGLDRGGVWDAFVSGEVRV
VELAPDGGVVDGVERVIAAPLGRHGVLVTGHPGTVAPDEVDVELVNLLSATVEELLDRID
AEAELRERDRRLEAQNEALTRLDRINATIRNINQSLIRAPTRGEALSAVAKHLVDADDYA
IVWHAEARDVDETYRPTSDAVHGADTAYADRLGEVASAEPLFPLLEAAVETREIQVVADV
LDDPAWADHRGDALSYGFRAIAVIPAVADDRVEALFVVHATDPDAFADDDGLLTDLGETV
GYALAATGRADAMLTERRTDVQVQLGGDRLSLSRLARRVGRAVSLGGVIPNSDGSVIAFV
TSDAEPEEVVAAGRDIATRVRHVSTDDSGSLFELRLPRESLFETLYASEATLRALDATPT
QTTLTAEVPERIRVRSFVDALDSNYPGTSLLSRRTADDGTESPQTFAAEMREAWTSRQYE
SIRAAHLSGFYEWPRRSTAETLAETFDISAPTYQYHLRAAERKLVGRVFE
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
ctgagtgacgacggcgagttcgcggcgtccctcgactcgtcgctgtcgtcgctcgacgga
gcgacgaccgtccggcacgtccgcacccccgccgcggcgcgcgcggaactcgtttccgcc
tcggcggccatctcctgtatcgtcctggccgcccccacggcggccggcgacgagggggcg
ttcgtccgcgacatctacgcccagggtatcgacgtcccggtcgtcgtcgcggccgccgac
caggagaccgcgacccgcgcggtcgaagccggcgcgacggactacgtcgtccgcgacgac
gaccccgagacgatgtcgtggctcgccttccgcgtcgagcgggcgctcggcgagtgcacc
ctcgctcggagccaccgggaccgaatcgaacagcagcgcgtcgtctccgaaatcggaacg
cgggcgctgaccgccgtcgacctcgactcgacgctcgaccacgccgcgagtcgcgtccgc
gacgtgctcgacgccagttcggtcacgattttcgagggcctcgacgacggcgcgttccgc
gtcgccgccgccgcgggctggtcggcgaatcgggaccacggactcgccgcggccgggggg
acgcaggcggtcgagacgtaccggtccgggcgttcgacgctcgtcgacgacttcgacgac
gacgagcgcttcgagcacgcgagcgacgcgggcccgtcgggaccgaaaagcggaatgagc
gcggccatcggcggcgacgacacccggtggggagtcatcgccgtccacggcgtcgccagc
gggcagttctccgacgacgacgtgctcttcttggagaacatcgccgccgtcgtcggcgcg
gcgaccgaacggcacgagctgaaaagcgccctctcggaggtcttagagcggatggacgag
gcggtgatggggttcgacgcggactggcgcgtcacctacgtcaactcgacggccgaacac
ggcctcgggatgtcggccgaggcggtgttggggacgcgaatctgggactcggtacccgag
tcggccgtcttccgcgaggagttcgagcgcgcgatggagcgacaggagccggcgaccttc
gaacagtactacgaccgcctcgaaacgtggtacgcggttcgggcgtacccctcagagacg
gggctgtccgtctacttcaccgacatcacggaacagttggaacacgaggtcgaagccgag
cagtacgggcggatgctcgcggccgtcgccgacgcggtgtacgcgctggacgacgagggt
cggttcgcggcggtcaaccccgcgttcgagcgcctcaccggactcgaccgcgaccgcgtc
atcgggtcgtcgacggcgttgctcaccgagaacgcgagcgcgaccgacggcagcgacgag
gcgttcgcgtcgacctcgcagggaatcgtggagttggacctgcggacgcccgacgagggg
gtcgtcagagtcgaggaccaccggacgccgctggtcgtcggcggggaggaggtcggctcg
gtcggcgtcctccgcgacgtgacgaagcgacaccgctacgagcgcctgctcgcgacgctc
cacgaccggacccgagagatgatgggcgcgaccgaccgacaggcggtcctccgggccgcc
gtcgacgcctgcgacgaggtgctcggcgacgcccggacggagctgttcgtcttcgacgag
gcggacacgagcctcgtccgggtcggcgcggccggaaccggcctcggcgacaagccggtc
gggggcggcctcgaccgcggcggggtctgggacgcgttcgtctccggcgaggtccgcgtg
gtcgaactcgcgcccgacgggggcgtcgtcgacggcgtcgagcgcgtcatcgccgcgccg
ctcggtcgtcacggcgtcctcgtcaccggccaccccggcaccgtcgcgccagacgaggtc
gacgtggagctcgtgaacctgctttctgcgaccgtcgaggaactgctcgaccgaatcgac
gccgaggcggaactacgcgagcgcgaccggcggctcgaggcccagaacgaggcgctcacc
cgactcgaccgaatcaacgcgaccatccggaacatcaaccagtcgctcatccgcgcgccg
acccgcggcgaggcgctttcggccgtggccaagcacctcgtcgacgccgacgactacgcc
atcgtctggcacgcagaggccagggacgtagacgagacgtaccggccgacgagcgacgcg
gtccacggcgctgacaccgcctacgccgaccggctcggagaggtggcgtccgctgagccg
ctgtttcccctgctcgaagccgccgtggagacccgggagatacaggtggtagcggacgtg
ctcgacgaccccgcgtgggccgaccaccgaggcgacgccctcagctacgggttccgcgct
atcgcggtcatccccgcagtcgccgacgaccgggtggaggcgctgttcgtcgtccacgcc
accgacccggacgccttcgccgacgacgacggcctgctcaccgacctgggcgagacggtc
ggctacgccctcgcggccaccgggcgcgccgacgccatgctgaccgagcgccggacggac
gtgcaggtacagctcggcggcgaccggctgtcgctgtcgcggctcgcccggcgcgtcggc
cgcgcggtgagcctcggcggcgtcatcccgaactccgacggctccgttatcgcgttcgtc
accagcgacgcggaacccgaggaggtcgtcgccgccgggcgggacatcgcgacgcgcgtg
cgccacgtctcgaccgacgactcggggtccctgttcgaactccgcctcccgcgggagtcg
ctgttcgagacgctgtacgcctcggaggcgaccctgcgcgcgctcgacgcgacgccgacc
cagaccacgctcaccgccgaggtgccggagcgaatccgggtccggtcgttcgtcgacgcg
ctcgactcgaactacccggggacgagtctgctgtcgcggcggaccgcggacgacggcacc
gagtcgccgcagacgttcgccgccgagatgcgcgaggcgtggacgagccggcagtacgag
tcgattcgggcggcccacctctccggattctacgagtggccgcgccgcagcaccgccgag
acgctcgccgagacgttcgacatcagcgcgccgacctaccagtaccacctgcgcgcggcc
gagcgaaaactggtcgggcgcgtcttcgaatga
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