Haloferax gibbonsii: ABY42_12040
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Entry
ABY42_12040 CDS
T04025
Symbol
tuf
Name
(GenBank) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
hgi
Haloferax gibbonsii
Pathway
hgi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hgi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
ABY42_12040 (tuf)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hgi03019
]
ABY42_12040 (tuf)
03016 Transfer RNA biogenesis [BR:
hgi03016
]
ABY42_12040 (tuf)
03012 Translation factors [BR:
hgi03012
]
ABY42_12040 (tuf)
04131 Membrane trafficking [BR:
hgi04131
]
ABY42_12040 (tuf)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hgi04147
]
ABY42_12040 (tuf)
Messenger RNA biogenesis [BR:
hgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
ABY42_12040 (tuf)
Transfer RNA biogenesis [BR:
hgi03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
ABY42_12040 (tuf)
Translation factors [BR:
hgi03012
]
Eukaryotic type
Elongation factors
ABY42_12040 (tuf)
Membrane trafficking [BR:
hgi04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
ABY42_12040 (tuf)
Exosome [BR:
hgi04147
]
Exosomal proteins
Proteins found in most exosomes
ABY42_12040 (tuf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
RsgA_GTPase
Ras
GTP_EFTU_D4
Septin
Hemolysin_N
FeoB_N
NTP_transf_3
EF-G_D2
Motif
Other DBs
NCBI-ProteinID:
AKU08428
UniProt:
A0A0K1IVV6
LinkDB
All DBs
Position
2374346..2375608
Genome browser
AA seq
420 aa
AA seq
DB search
MADKPHQNLAIIGHVDHGKSTLVGRLLFETGSVPEHIIEQHREEAASKGKSGFEFAYVMD
NLAEERERGVTIDIAHQRFDTDKYYFTIVDTPGHRDFVKNMITGASQADHAILVVAADDG
VAPQTREHVFLARTLGIEELIIAVNKMDVVDYSEDSYKQVKEEVQQLLNQVRFNSDDAGF
IPISAFEGDNISEPSENMPWFDGPTVLESLNNLPEPSPPTDAPLRVPIQDVYTISGIGTV
PVGRVETGILKTGDNVRFMPSDAGGEVKTIEMHHEEVPEAGPGDNVGFNVRGVGKDDIRR
GDVCGPADDPPSVAKTFKAQIVVMQHPSVITAGYTPVIHAHTAQVACTFESLDQKLDPAS
GEVAEEEPDFIKAGDAAVVTLRPQKPLSIEPSSEIAELGSFAIRDMGQTIAAGKVLEVYE
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaaccacaccagaacctagccatcatcggacacgtcgaccacgggaaatcc
acgctcgtcggccggctcctgttcgagacaggcagcgtcccggaacacatcatcgaacag
caccgcgaggaggcggcgtccaaggggaagtcgggcttcgagttcgcctacgtgatggac
aacctcgccgaggagcgcgaacgcggcgtcaccatcgacatcgcccaccagcgcttcgac
acggacaagtactacttcaccatcgtggacacgcccggccaccgcgacttcgtgaagaac
atgattacgggcgcgtcgcaggccgaccacgcgattctcgtcgtcgccgccgacgacggc
gtcgcgccgcagacccgcgagcacgtcttcctcgctcgaacgctcggcatcgaggaactc
atcatcgcggtcaacaagatggacgtcgtcgactacagcgaggactcctacaagcaggtc
aaagaggaggtccaacagctcctgaaccaggtacggttcaactccgacgacgccggtttc
atccccatctcggcgttcgagggcgacaacatctccgagccctcggagaacatgccgtgg
ttcgacgggccgaccgtactggagtcactcaacaacctcccagagccgtcgccgccgacg
gacgcgccgcttcgcgtcccgattcaggacgtgtacaccatctccggcatcgggacagtc
ccggtcggccgcgtcgagacggggattctcaagaccggcgacaacgtccggttcatgccc
tctgacgcgggtggcgaggtgaagaccatcgagatgcaccacgaggaggtcccggaggcg
ggccccggcgacaacgtcggcttcaacgtccgcggcgtcggcaaggacgacatccgccgc
ggcgacgtctgcggccccgccgacgacccgccgtcggtcgccaagacgttcaaagcacaa
atcgtggtcatgcaacacccgtcggtcatcaccgcgggctacacgccggtcatccacgcg
cacacggcgcaggtcgcctgtacgttcgagtcgctcgaccagaagctcgaccccgcgtcg
ggcgaggtcgcagaggaagagccggacttcatcaaggccggcgacgccgccgtcgtcacg
ctgcgtccccagaagccgctcagcatcgaaccgtcgtcagaaatcgccgaactcgggagc
ttcgccatccgcgacatgggacagaccatcgcggccggcaaagtcctcgaagtctacgag
tag
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