Haloferax gibbonsii: ABY42_12475
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Entry
ABY42_12475 CDS
T04025
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hgi
Haloferax gibbonsii
Brite
KEGG Orthology (KO) [BR:
hgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hgi03016
]
ABY42_12475
Enzymes [BR:
hgi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ABY42_12475
Transfer RNA biogenesis [BR:
hgi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABY42_12475
Prokaryotic type
ABY42_12475
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
PUA
DKCLD
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AKU08508
UniProt:
A0A0K1IW28
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All DBs
Position
complement(2461564..2462433)
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AA seq
289 aa
AA seq
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MLRDPPEHRSVDDLLSFGVVNLDKPPGPSAHQVTGWVRDMADVDRAAHSGTLDPKVTGCL
PTLLGDATRMAQVFLEGSKEYVSVLELHGPAPADIDSTVAEFESKLYQKPPRKSAVSRRL
RVREVYDLDLLEVKDRQALLRIRCESGTYIRKLCHDLGLALGTGGHMGHLRRTATDPFDD
ADLATLHDLTDALAFAEEGDESWLRDVVSPAERALSHLPSVTVANSAAREVANGAPVYAP
GVFDVDADASRGDLVACYTDDGSAVCLGELVGDADADAGEVVSLEAVLV
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgctccgagacccgcccgaacaccggagcgtcgacgacctgctctcgttcggcgtcgtc
aacctcgacaagccgccggggccgtcggcccaccaagtcaccggctgggtccgcgacatg
gccgacgtcgaccgcgccgctcactcggggacgctcgacccgaaggtgaccggctgtctc
cccacgctcctcggcgacgcgacccgcatggcgcaggtgttcctcgaaggctcgaaggag
tacgtctccgtgctcgaactccacgggcccgcgccggccgacatcgactcgaccgtcgcc
gagttcgaatcgaagctctaccagaagcccccgcggaagtccgccgtctcgcgccgcctc
cgcgtccgcgaggtgtacgacctcgacctcctcgaagtgaaagacagacaggcgctgttg
cgcatccggtgcgagtcgggcacgtacatccggaaactgtgtcacgacctcggactcgcg
ctcggtaccggcggccacatgggtcacctccgccggaccgcgaccgaccccttcgacgac
gcggacctcgccacgctccacgacctcacggacgccctcgcgttcgccgaggagggcgac
gagtcgtggctccgcgacgtggtctcgcccgccgagcgggcgctgtcgcacctcccatcg
gtcaccgtggccaacagcgcggcccgcgaggtcgccaacggcgcgcccgtctacgcgccc
ggcgtcttcgacgtcgacgccgacgcctcccgcggcgacctcgtcgcctgttacaccgac
gacggttcggccgtctgtctgggcgaactcgtcggcgacgcggacgccgacgccggcgag
gtcgtctcgctggaagccgtgttagtctga
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