Haloferax gibbonsii: ABY42_14210
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Entry
ABY42_14210 CDS
T04025
Name
(GenBank) bacteriocin biosynthesis protein SagD
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
hgi
Haloferax gibbonsii
Brite
KEGG Orthology (KO) [BR:
hgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hgi03009
]
ABY42_14210
Ribosome biogenesis [BR:
hgi03009
]
Prokaryotic type
ribosomal protein modification factors
ABY42_14210
BRITE hierarchy
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GFIT
Motif
Pfam:
YcaO
DUF6317
Motif
Other DBs
NCBI-ProteinID:
AKU08833
UniProt:
A0A0K1IX18
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Position
complement(2778390..2780078)
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AA seq
562 aa
AA seq
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MNIGLVGSGPAAESIRAACADIDATVSETAPDSLGSFDLGFVVAAAGSDAFDAADEAASR
WLAVEIGGVGGHPVDDLDAAVSAFDPASADFADLRARVASTTESEGRPGGDRAAVRLAGA
VAGRRGIALLSGDDVAGTVVEVPGPERSFLPAPSPMERDRTLDRDFRAVELDDALARAES
AVDDRVGIVTQVGERESFPLPYYVAQTADTTVYADARAAELAGGAAAGWDEAYMKALGEA
LERYSAGVYRSSEFAVAPAASRPAAVPPSRFVRPDSFRDPDPEEPIQWVEGEDLATGSTV
SLPAEFVHYPPPSERHKPSITTGLGLGNSGTEAILSGLYEVVERDATMLAWYSTFDPLGL
DVTDETFETLAGRARSESLEVTALLVTQDVDVPVVAVAVHRDGEWPKFAMGSGADLDANR
AARSALAEALQNWTELRGMGPEQAATQGGAIATYADFPKPARTFVSPDATIPADSVGPDE
VPEGAAELDAVVSAVTDADLDAYAARTTPRDVERLGFEAVRVVVPAAQPLFIGEPYFADR
AESVPRDLGFEPRLDREFHPFP
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcggactcgtcgggagcggtcccgccgccgagtcgattcgcgcggcgtgcgcc
gacatcgacgcgacggtctcggagacggcccccgactcgctcggttcgttcgacctcggc
ttcgtcgtcgccgcggccggcagcgacgccttcgacgcggccgacgaagccgcttcgaga
tggctcgccgtcgaaatcggcggtgtcggcggccaccccgtggacgaccttgacgcggcc
gtctcggcgttcgaccccgccagcgccgacttcgcggacctccgggcgcgcgtcgcgtcc
accacggagtcggagggacgccccggcggtgaccgcgcggccgtccgactcgccggcgcg
gtggccgggcggcgcggtatcgcgctcctctcgggcgacgacgtggccgggaccgtcgtc
gaagtccccggtcccgagcggtcgttcctccccgcgccgtcgccgatggagcgggaccga
accctcgaccgcgacttccgcgccgtggagttagacgacgcgctcgcgcgggccgaatcg
gccgtggacgaccgcgtcggcatcgtcacgcaggtcggcgagcgcgagtcgttcccgctg
ccgtactacgtcgcgcagacggcggacacgacggtctacgccgacgcccgggcggccgaa
ctcgccggcggcgccgccgccggctgggacgaggcctacatgaaggcgctcggcgaggcg
ctcgaacgctactcggcgggcgtctaccgctccagcgagttcgccgtcgcgcccgcggcg
tctcggccggccgcggtgccgccgagtcgcttcgtcagacccgactcctttcgcgacccc
gaccccgaggagccgattcagtgggtcgaaggcgaggacctcgcgaccggctcgaccgtc
tcgctcccggcggagttcgtccactacccgccgccgtccgaacgacacaagccgtcgatt
acgaccgggctcggcctcggcaactccgggaccgaggcgattctctcggggctctacgag
gtcgtcgagcgcgacgcgacgatgctcgcgtggtactcgacgttcgacccgctcggactg
gacgtgaccgacgagacgttcgagacgctggcgggccgcgcccgctcggagtccctagaa
gtgaccgcgctcctcgtgacgcaggacgtggacgtgccggtcgtggcggtggccgtccac
cgcgacggcgagtggccgaagttcgcgatgggctccggcgcggacctcgatgcgaaccgc
gccgctcgctccgcgctggccgaggcgctccagaactggaccgaactgcgcggcatggga
ccggagcaggccgcgacgcagggcggcgcgattgcgacctacgccgacttcccgaagccg
gctcggacgttcgtctcgccggacgcgactatcccagcggactcggtcggccccgacgag
gtccccgaaggcgcggccgaactcgacgcggtcgtctcggcggtcacggacgccgacctc
gacgcgtacgcggcgcggaccaccccgcgcgacgtggaacgactcggcttcgaggcggtc
cgcgtggtcgttccggccgcacagccgcttttcatcggcgagccgtacttcgccgaccgc
gccgagtcggtgccgcgagacctcggcttcgagccgcgactggaccgcgagttccacccg
ttcccgtag
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