Haloferax gibbonsii: ABY42_14360
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Entry
ABY42_14360 CDS
T04025
Name
(GenBank) hypothetical protein
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
hgi
Haloferax gibbonsii
Brite
KEGG Orthology (KO) [BR:
hgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hgi03016
]
ABY42_14360
Enzymes [BR:
hgi01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
ABY42_14360
Transfer RNA biogenesis [BR:
hgi03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
ABY42_14360
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GFIT
Motif
Pfam:
Radical_SAM_C
ELP3_N
Radical_SAM
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
Motif
Other DBs
NCBI-ProteinID:
AKU08861
UniProt:
A0A0K1IWL6
LinkDB
All DBs
Position
complement(2807218..2808876)
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AA seq
552 aa
AA seq
DB search
MSVSAETETESEAFERTCEALVERILAGDVDRDGLESAKLDACSEHSSPKVPKNVEILQY
APEDRREEVKEVVQRKPVRTASGVSPVAIMTSPHMCPHGKCLYCPGGPASEFSSSQSYTG
HEPAAARGVQNDYDPYGQVTLRLEQLRHIGHPVDKVELILMGGTMTARSHDYQEWFVKRA
LEAMNDYDLDKEPEPAEDRSFKPDPEDVEFKYIEDVIAENETNDIRNIGTTFETKPDWCD
PEQIDRMLDLGATKVEVGVQTTYERINREMHRGHGVQASIDANRRLRDSAFKVGFHMMPG
QPGMTKEMCLEDFRQLFENSDWRPDYLKIYPTLIVRDTITYDMWRRDEYEPLNNEEAADI
VAEVMGMIPKYTRLQRVQRDIPADFIDAGVWKSNLRQLAAQRAEERGIVQRDIRAREVGM
NEADPDPERIELDVMTYEVAGGTEHFISFEDPVEDLLVGFCRLRFPGNPVRRELQDAALV
RELHVYGSEAGIGADGDWQHKGYGKKLLAHAEELSRDAGYDKISVISGIGVRQYYKEKLG
YHQDGPYVSKRL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgtgagcgccgagaccgagacggagtccgaggcgttcgaacggacctgcgaggcg
ctcgtcgagcgcatcctcgcgggcgacgtcgaccgcgacggcctcgaatcggcaaagctc
gacgcctgttcggaacactcctcgccgaaggttccgaagaacgtcgagattctgcagtac
gccccggaagaccgccgcgaggaggtcaaagaggtcgtccagcgaaagcccgtccggacc
gcctccggcgtctcgccggtcgccatcatgacctcgccgcacatgtgcccccacgggaag
tgtctctactgtcccggcgggcccgccagcgagttctcctcgtcgcagtcgtacacgggc
cacgagcccgcggccgcccgcggcgtccagaacgactacgacccctacgggcaggtcacg
ctccgactcgaacagcttcgacacatcggccatcccgtggacaaggtcgaactcatcttg
atgggcgggacgatgaccgcccggagccacgactaccaggagtggttcgtcaagcgggcg
ctcgaagcgatgaacgactacgacctcgacaaggagcccgaaccggcggaagaccggtcg
ttcaagcccgaccccgaggatgtcgagttcaagtacatcgaggacgtcatcgccgagaac
gagacgaacgacatccgcaacatcgggacgaccttcgagacgaagccggattggtgcgac
cccgagcagatagaccggatgctcgatttgggcgcgacgaaggtcgaagtcggcgtccag
acgacctacgagcgcatcaaccgcgagatgcaccgcggccacggcgtgcaggcctctatc
gacgccaaccgccggctccgcgactcggcgttcaaggtcggcttccacatgatgcccggc
cagccgggcatgaccaaggagatgtgtctggaggacttccgtcagctgttcgaaaacagc
gactggcgccccgattacctcaaaatctacccgacgctcatcgtccgcgacaccatcacc
tacgacatgtggcggcgcgacgagtacgaaccgctgaacaacgaggaggccgccgacatc
gtcgcggaggtcatgggcatgattccgaagtacacccgcctccagcgcgtccagcgggac
atccccgcggacttcatcgacgccggcgtctggaagtcgaacctccgacaactggccgcc
cagcgcgccgaggaacgaggtatcgtccagcgggacatccgcgcccgcgaggtcggcatg
aacgaggccgacccggacccagagcgcatcgaactcgacgtgatgacctacgaggtcgcc
ggcggcacggagcacttcatctcgttcgaggaccccgtcgaggacctgctcgtcgggttc
tgtcgcctccggttccccggcaacccggtccgccgcgaactgcaggacgcggcgctcgtc
cgtgaactccacgtctacggctccgaggcgggcatcggtgccgacggcgactggcagcac
aagggctacgggaagaagctcctcgcgcacgccgaagaactgtcccgcgacgccggctac
gacaagatttcggtcatctcgggcatcggcgtccggcagtactacaaggagaaactcggc
taccaccaggacggtccgtacgtgtcgaagcggctgtag
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