KEGG   Haloferax gibbonsii: ABY42_14720
Entry
ABY42_14720       CDS       T04025                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
hgi  Haloferax gibbonsii
Brite
KEGG Orthology (KO) [BR:hgi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hgi03032]
    ABY42_14720
   03400 DNA repair and recombination proteins [BR:hgi03400]
    ABY42_14720
Enzymes [BR:hgi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     ABY42_14720
DNA replication proteins [BR:hgi03032]
 Prokaryotic type
  DNA Topoisomerases
   ABY42_14720
DNA repair and recombination proteins [BR:hgi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      ABY42_14720
SSDB
Motif
Pfam: Auto_anti-p27 NucS_N Zn_ribbon_Top1 Zn_ribbon_6 PsV_CP_C Zn_ribbon_TFIIB DNA_ligase_ZBD
Other DBs
NCBI-ProteinID: AKU08924
UniProt: A0A0K1IWV4
LinkDB
Position
complement(2881141..2881872)
AA seq 243 aa
MDSIRVFAGDCTVSFEGSRDRTQRGRVVVVAKPDRTVLVHDAGGYQPVAWLTRADSLTVE
SGPGSFGLVARAGDQTLTVESNDVTGRAEYPASDAGVPVGSHPDTGDPLVRTNGSVVALD
SGTEYRLPAGATVLDETCDDCGLPLMRVERGAPFEVCIDRRCDPLDDHVRDRFDGEWSCP
DCGSPLRIIRRGGRLLAGCDAYPECETAFSLPAGVVGDDCECGLPIFETSRGRRCLDSTC
EVA
NT seq 732 nt   +upstreamnt  +downstreamnt
atggattcgatacgcgtcttcgccggcgactgcaccgtcagcttcgagggctcccgcgac
cgcacccagcgcggccgggtcgtcgtcgtggccaaacccgaccgcaccgtcctcgtccac
gacgccgggggctaccaacccgtcgcgtggctgacccgcgccgactcgctgaccgtcgag
tcggggccggggtcgttcggcctcgtggcccgcgccggcgaccagaccctcacggtcgag
tcgaacgacgtgaccggccgcgccgagtaccccgcgagcgacgcgggcgtcccggtcggt
tcacaccccgacaccggcgacccgctcgtcaggactaacgggtccgtcgtcgccctcgac
tcggggaccgagtatcgcctgccggcgggcgcgaccgtcctcgacgagacgtgtgacgac
tgcggcctgccgctgatgcgcgtcgagcgcggcgcgccgttcgaggtgtgtatcgaccgc
cggtgcgacccgcttgacgaccatgtgagagaccgcttcgacggcgagtggtcctgtccg
gactgcgggtcgccgctccgcatcatccgacggggcggccggctgctcgccggctgtgac
gcctaccccgagtgcgaaacggcgttttccctccccgcgggcgtcgtcggcgacgactgc
gagtgcggcctcccgatattcgagacgagtcgcggccggcggtgtctcgactccacctgc
gaggtcgcatga

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