Haloferax gibbonsii: ABY42_15075
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Entry
ABY42_15075 CDS
T04025
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
hgi
Haloferax gibbonsii
Pathway
hgi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hgi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ABY42_15075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hgi03021
]
ABY42_15075
Transcription machinery [BR:
hgi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
ABY42_15075
Prokaryotic type
Archaeal type
TFB
ABY42_15075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Cyclin_C
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AKU09479
UniProt:
A0A0K1IYF1
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All DBs
Position
pHG1:6539..7537
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AA seq
332 aa
AA seq
DB search
MRDESAPTAEPEARRSGDERDEDEAESSEAAVEDRTDLVYDEQHGEWVDPETGEILREDE
IDRGPEWRAFDAAERDQKSRVGSPTTNMMHDKGLSTNIGWQNKDAYGNSLSSGQRQKMQR
LRTWNERFRTRDSKERNLKQALGEVERMGSALGLPDTVRETASVIYRRALDDDLLPGRSI
EGVATAAIYAAARQAGVPRSLDEVRRVSRVDKMELTRTYRYVSRELGLDMKPADPAQYLP
RFVSELDVTDDVERRARSLLDNAKRQGIHSGKSPVGLAAAAIYAGGLLADEELTQSEVSD
VTDISEVTIRNRYRELLEATQKSGEMTVGSTA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcgggacgagtcggcaccgacggcggagccagaggcccgacggtccggcgacgagcgc
gacgaagacgaggccgagtcgtccgaggcggcggtcgaagaccggaccgacctcgtctac
gacgagcaacacggcgagtgggtcgaccccgagacgggcgaaatcctccgcgaggacgaa
atcgaccgcggcccggagtggcgcgcgttcgacgccgcggagcgcgaccagaagtcccgc
gtcgggtcgccgacgacgaacatgatgcacgacaaggggctgtcgaccaacatcggctgg
cagaacaaagacgcctacggcaactccctgtcgtcgggacagcgccagaagatgcagcga
ctccgcacgtggaacgagcggttccgcacccgcgactccaaggagcgcaatctcaagcag
gcgctcggtgaggttgagcggatgggctcggcgctcgggcttccggacaccgtccgcgag
accgcctcggtcatctaccgccgcgcgctcgacgacgacctgctccccggccgctccatc
gagggcgtcgccacggccgccatctacgccgcggcccgacaggccggcgttccgcgctcc
ctcgacgaggtccggcgcgtctcccgcgtcgacaagatggagctcacgcggacgtaccgc
tacgtctcccgcgaactgggcctggacatgaagccggcggacccggcgcagtacctcccg
cggttcgtctccgaactcgacgtgaccgacgacgtggagcgccgcgctcggtcgctcctc
gacaacgcgaagcgacagggcatccacagcggcaagagccccgtcggcctcgcggcggcg
gccatctacgccggcgggctgctcgccgacgaggaactgacgcagtccgaggtgagcgac
gtgaccgacatcagcgaggtgaccatcaggaaccgctaccgcgagctcctcgaagcgacc
cagaagtcgggcgagatgaccgtgggttcgaccgcgtaa
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