Haloferax gibbonsii: ABY42_16590
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Entry
ABY42_16590 CDS
T04025
Name
(GenBank) bacterio-opsin activator
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hgi
Haloferax gibbonsii
Brite
KEGG Orthology (KO) [BR:
hgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hgi03000
]
ABY42_16590
Transcription factors [BR:
hgi03000
]
Prokaryotic type
Helix-turn-helix
Other families
ABY42_16590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
GAF_2
HTH_10
PAS_4
GAF
PAS
Response_reg
GAF_3
PAS_9
Sigma70_r4
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AKU09409
UniProt:
A0A0K1IY81
LinkDB
All DBs
Position
pHG1:367832..370696
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AA seq
954 aa
AA seq
DB search
MAGVPDSGSVLVVGESDWVTRFAEGLDSRPGVAVLKAETKAAALRAVEADEVDCVVVDAD
LADATAVDLLTDVRSAVATLPVVVATDGGSDVLASEVLGAGATDYVALDADSPDVETLLA
RTGRALRSARQTAGERERARQFDATFDDERTATWVLDGEGSLTRANRTARELLDAPVDPL
VGGAFWSLPWWSKGDDPTSDDVRRLIEDALEGTAGNAVVPQPSEAGRRRIVELSVRPVTD
ERGEVASVVVEGIDITARVSLERDLRRSEELHRVTLNNMTDTVLITDESGAYTYVCPNVH
FIFGYTADELRERVPIDELLGEDLFDRDELAERGVLKNIESTVTDKAGREHTLLVNVREV
SIRDGTLLFSCRDITKRKQREDALTTLHETAREFLYTGTHRQIAQRVVDDTPGVLALDAS
AVYLFDADANALRPAAYSPAMREAHGPLPTVPADGETLPSHSFVEDSPLYFDDVHEADRL
ENSVTGLRSVAYVPLGDHGVFVAGSTEVGAFDAVARELTDLLAVTAEAALDRVTRESRLR
EQDRTLQRQNDRLTELNRINETIREIDQALVGAQTREEIDYTVCELLTAADRFAFAWVGS
VDPIGETVEPRAWAGDERGYLDSTTFEVAASSVEPAGRTAATGEVTTVPNVASGFRDEPW
RKGALTRDYLSVLSIPLVYNDLSHGVLTVYATTHDAFDETATAVLAELGETIASALSALE
RKNALLTTAVTRVGFAVDDPTFVLSRLARDTGCTLTYRGGVQQSAEGNYVFVTVEDGAVE
SVAAAADELVAVADVRRISTDGDAGVLRLRLTQPFLAPELADHGAVLGEVRATPEETTLV
VDVPESIDVRNVTHLVDEAFAGVELRTKQTLDRSTERDLFSRFLDKLTERQLEVLQTAYY
SGYFESPRENTGEDVAATLGISPPAFYKHVRTVQRKLFATLFDEHSGSVSGRSG
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgtccccgattctggcagcgtgctggtcgtcggcgagagcgactgggtgacg
cggttcgccgagggactcgattcgcgacccggcgtcgccgtgctgaaagccgagacgaag
gcggcggcactccgcgcagtcgaagcggacgaggtcgactgcgtcgttgtcgacgccgac
ctcgcggacgcgaccgccgtcgacctcctcacagacgttcgctcggcggtcgcgaccctt
cccgtggtcgtcgccacggacggcgggagcgacgtcctcgctagcgaggtcctcggtgcg
ggcgcgactgactacgtcgcgcttgacgccgactcgccggacgtcgaaacactcctcgcg
cggaccggacgggcgctccggtcggcgcgacagacggccggcgagcgcgaacgcgccagg
cagttcgacgcgacgttcgacgacgaacggacggcgacgtgggtgctcgacggggagggg
tcgttgactcgggcgaaccggacggcgcgggaactcctcgacgcgccggtcgacccgctc
gtcggcggggccttctggtcactcccgtggtggtcgaaaggagacgacccgacgagcgac
gacgtgcgacggctcatcgaggacgcgctcgaagggacggccgggaacgcggtggtccca
cagccgtcggaggccggaaggcgacgcatcgtcgagctatcggtccgccccgtgaccgac
gagcgcggggaggtcgcatcggtcgtggtcgagggtatcgacatcacagcgcgggtgtcc
ctcgaacgagacctccgccgctccgaggaactccaccgcgtcacgctcaacaacatgacc
gatacggtcctcatcaccgacgagtcgggggcctacacctacgtctgcccgaacgtccac
ttcatcttcggctacaccgcagacgagttgcgcgaacgggtccccatcgacgaactgctg
ggggaggacctcttcgaccgcgacgaactcgcggagcgcggcgtcctgaaaaacatcgag
agcacggtgaccgacaaagccggccgcgaacacacgctcctcgtcaacgtccgcgaggtc
tcgattcgggacgggacgctgcttttcagttgccgcgatatcacgaagcgcaagcagcgc
gaggacgcgctgacgacgctccacgagacggctcgcgagttcctctacacggggactcac
cgacaaatcgcccagcgcgtcgtcgacgatacgcccggcgtgctcgcgctcgatgccagc
gccgtctacctcttcgacgccgacgccaacgcgctcaggccggcggcatactcgccggcg
atgcgggaggcccacggcccgctcccgacagttcccgcggacggggagacgctcccgagc
cacagtttcgtcgaggacagtccgctgtacttcgacgacgtgcacgaggccgaccggttg
gagaactccgtgaccggcctccggagcgtcgcgtacgtcccactcggagaccacggcgtg
ttcgtcgccggctcgaccgaggtcggagccttcgacgcggtggcgcgggagctgaccgac
ctgctcgcggtgaccgccgaggcggcgctcgaccgcgtcacgcgcgaatcccggctccgc
gaacaagaccggacgctccagcgacagaacgaccggctcaccgagctaaaccgaatcaac
gagaccatccgcgaaatcgaccaagcgctcgtcggagcccagacgcgagaggagatagac
tacaccgtctgcgagctgctgaccgccgccgaccgattcgcgttcgcgtgggtcggctcc
gtcgaccccatcggcgagaccgtcgagccccgcgcgtgggccggcgacgagcggggctat
ctcgacagcactacgttcgaagtcgcggcgtcgtcggtcgagccggcgggacgcacggcg
gcgaccggagaggtgaccaccgttcccaacgtcgcgtccggtttccgggacgaaccatgg
cggaagggcgcgctcacccgagactacctgtcggtgctcagcatcccgctcgtctataac
gacctctcgcacggcgtgttgaccgtgtacgcgacgacgcacgacgccttcgacgagacg
gcgaccgccgtcttggccgagctcggcgagaccatcgcgtcggcgctgagcgccctcgaa
cgaaagaacgcactgctcaccacggccgtcacccgcgtcgggttcgccgtcgacgacccc
acgttcgtcctctcgcgactcgcccgcgacacggggtgcacgctcacctaccgcggaggg
gtccaacagtccgccgaaggaaactacgtgttcgtcaccgtcgaagacggggcggtcgaa
tccgtcgcggccgcggccgacgaactggtcgccgtcgccgacgtgcgacggataagcacc
gacggggacgccggcgtcctgcgcctgcgcttgacgcagccgtttcttgcaccggagctc
gcggaccacggtgccgtcctcggagaggtgcgagcgacccccgaggagacgacgctcgtc
gtcgacgtccccgagagcatcgacgttcggaacgtcacgcacctcgttgacgaagcgttc
gccggcgtcgaactccgcaccaaacagacgctcgaccgctcgaccgagcgcgacctcttc
tcgcggttcctcgacaagctgacagagcgacagctcgaggtgcttcagacggcctactac
agcggctacttcgaatcgccgagggagaatacgggcgaagacgtcgccgcgacgctcggc
atctcaccgccggcgttctacaaacacgtccggaccgtccagcggaaactgttcgcgacg
ctgttcgacgagcactccgggtccgtctccggaaggtccgggtag
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