Heterocephalus glaber (naked mole-rat): 101696410
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Entry
101696410 CDS
T02812
Symbol
Pdzrn3
Name
(RefSeq) PDZ domain containing ring finger 3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hgl04121
]
101696410 (Pdzrn3)
Enzymes [BR:
hgl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101696410 (Pdzrn3)
Ubiquitin system [BR:
hgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
101696410 (Pdzrn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
Sina_ZnF
zf-TRAF
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
TRAF3_RING
Prok-RING_4
PDZ_Tricorn
CEP104_ZnF
Motif
Other DBs
NCBI-GeneID:
101696410
NCBI-ProteinID:
XP_004854272
UniProt:
A0AAX6PL46
LinkDB
All DBs
Position
Un
AA seq
1069 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPSRCRGRL
SAKELNHVLPLKRLILKLDIKCAHAARGCSRVVKLQELPEHLERCDFAPARCRHAGCGQV
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTQGEQRSGGHCCARALRAHNGALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAAQPGS
SKGEETKSLTLVLHRDSGSLGFNIIGGRPCVDNQDGSSSEGIFVSKIVDSGPAAKEGGLQ
IHDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPAELQLVDTGTQ
TDITFEHIMALTKMSSPNSPVLDPYLLPEEHPSAHEYYDPNDYMADIHQEMDREELELEE
VDLYRLSSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQ
NREEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFT
ASVLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNEESSEQENNGDDATASSNP
LAGQRKLTCSQDTLGSGDVPFSNESFVSADCTEVDYLGIPVDECERFRELLELKCQVKSA
SPYSLYYPSSPLDATKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLKEQYREPW
LLHHGGFRNYNTSLDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSL
RRAAEGLSCSGSEGAGAMGTAEGYGPSPKNLLAITEDPEVGTPNYNPSAKELDPSQPLES
KERRATEGGRSPLGSPKLGGAYLSSSPHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQ
SQMSLVSMCKDLASSNSSEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGM
TTDDDAVSELKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLDCLKEQQGADDRKEMNI
LELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgggattcgagctggaccgcttcgacggcgatgtggacccggacctgaagtgtgcgctc
tgccacaaggtcctggaggacccgctgaccactccgtgcggccacgtcttctgcgccggc
tgcgtgctgccctgggtggtgcaggagggcagctgcccatcgcgctgccgcggccgcctg
tcggccaaggagctcaaccacgtcctgccgctcaagcgcctcatcctcaagctggacatc
aagtgcgcgcacgccgcgcgcggctgcagccgggtggtcaagctgcaggagctgcccgag
cacctcgagcgctgcgacttcgcgcccgcgcgctgccgccacgcgggctgcggccaggtg
ctgctgcggcgcgacgtggaggcacacatgcgcgacgcctgcgacgcgcggcccgtgggc
cgctgccaggagggctgcgggctgcccctgactcaaggcgagcagcgctccggcggccac
tgctgcgcgcgggcgttgcgggcgcacaacggcgcgctacaggcccgtctgggcgcgctg
cacaaggcgctcaagaaggaggcgctgcgcgcagggaagcgcgagaagtcgctggtggcg
cagctggccgccgcgcagctggagctgcagatgaccgctctgcgctaccagaagaagttc
accgagtacagcgcgcgcctagactcactcagccgctgcgtggccgcgcagccgggcagc
agcaagggtgaagaaaccaaaagcctgacccttgtcctgcatcgggattctggttccctg
ggattcaatattattggtggccggccgtgtgtggacaatcaagatggatcatccagtgaa
ggaatctttgtatccaaaatagttgacagtgggcccgcagccaaggaaggaggcctgcaa
attcatgacaggattattgaggtcaacggcaaagacttatccagagcaactcatgaccag
gctgtggaagcttttaaaacagctaaggagcccattgtagtacaggtattgaggagaacg
cctcggaccaaaatgttcacccctcctgcggagttgcagttggtggacacaggcacccag
accgacatcacctttgagcacatcatggccttgacaaagatgtcctctcccaactcgcct
gtgctagacccctacctcctgccagaggagcatccctcagcccatgagtactacgatcca
aatgactacatggcggacatccatcaggagatggacagggaggagctggagctggaggaa
gtggatctctacagactaagcagccaagacaagctgggcctcactgtgtgctaccggaca
gatgacgaagatgacattgggatttatataagtgagattgaccctaacagcattgcagcc
aaggacgggcgcattcgggaaggagaccgcatcatccagattaatggcatagaggtccag
aaccgtgaagaagctgtggctcttttgacaagtgaagaaaataagaacttttcactgctg
attgcaaggcctgaactccagctggatgagggctggatggacgacgacaggaatgacttt
ctcgatgacctgcacatggacatgctagaggaacagcaccaccaggccatgcagttcacg
gccagtgtgctccagcagaagaaacatgaggaagatggtgggaccacagacacagccacc
atcctgtccaaccaacacgagaaggacagcggcgtggggcggaccgatgagagcacccgc
aatgaggagagctctgagcaggagaacaacggggacgacgccactgcgtcctccaacccg
ctggcgggccagaggaagctcacgtgcagccaagacacactgggcagcggagacgtgccc
ttcagcaacgagtcttttgtctccgctgactgcaccgaagtggactacctgggcattccg
gtggatgagtgcgagcgcttccgtgagctgctggagctcaagtgccaggtgaagagcgcc
agcccctacagcctctactatcccagcagccccctggacgctaccaagagcgaccccgag
agcgtggacaaggagctggagctgctgaacgaggagctgcgcagtatcgaactggagtgc
ctgagcatcgtgcgcgcgcacaagatgcagcagctcaaggagcagtaccgcgagccctgg
ctgctgcaccacggtggcttccgcaactacaacactagcctcgacgtgcgccgccacgag
ctgtccgacatcaccgagctgccggagaagtccgacaaggacagctcgagcgcctacaac
accggcgagagctgccggagcaccccgctcaccctggagatctcccctgacaactccttg
cggagggcggcggagggcctcagctgctccggcagcgaaggggctggggccatggggacc
gccgagggttacgggccatcccctaagaacctgctcgccatcactgaagaccccgaggtc
ggtaccccaaactacaacccttcagccaaagagctggaccccagccaacccctggagagc
aaagagcgcagagccactgagggcggcaggagccccttgggcagcccgaagctgggcggt
gcttacctgtcgtcctccccgcactccccgtacaagcacgcgcacatcccggcccatgcg
cagcactaccagagctacatgcagctgatccagcagaagtccgccgtggagtacgcgcag
agccagatgagcctggtgagcatgtgcaaggacctggcctcttccaactcctcggagccc
aggatggagtggaaggtgaagatccgcagcgacgggacgcgctacatcaccaaaaggccg
gtgcgcgaccgcctgctgagggaacgcgccctcaagatccgcgaggagcgcagcggcatg
accacggacgacgacgctgtgagcgagctgaagatggggcgctactggagcaaggaggag
cgcaagcagcacctggtgaaggccaaggagcagaggcgcaggcgcgagttcatgatgcag
agcaggttagattgtctgaaggagcagcagggggccgacgacaggaaggagatgaatatc
ctggaactgagccacaaaaagatgatgaagaagaggaataaaaagatctttgataattgg
atgactattcaagaactcttaacgcacggcacaaaatccccagacggcactagagtatac
aattccttcttatcggtgactactgtataa
DBGET
integrated database retrieval system
