Heterocephalus glaber (naked mole-rat): 101697246
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Entry
101697246 CDS
T02812
Symbol
Rfc1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03030
DNA replication
hgl03410
Base excision repair
hgl03420
Nucleotide excision repair
hgl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101697246 (Rfc1)
03410 Base excision repair
101697246 (Rfc1)
03420 Nucleotide excision repair
101697246 (Rfc1)
03430 Mismatch repair
101697246 (Rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hgl03032
]
101697246 (Rfc1)
03400 DNA repair and recombination proteins [BR:
hgl03400
]
101697246 (Rfc1)
DNA replication proteins [BR:
hgl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
101697246 (Rfc1)
DNA repair and recombination proteins [BR:
hgl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
101697246 (Rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
RuvB_N
BRCT_2
AAA_22
Rad17
AAA_14
AAA_30
AAA_17
AAA_5
AAA_16
AAA_33
AAA_18
nSTAND3
AAA_7
Zeta_toxin
NTPase_1
RNA_helicase
NPHP3_N
AAA_19
TIP49
Motif
Other DBs
NCBI-GeneID:
101697246
NCBI-ProteinID:
XP_004870353
UniProt:
A0AAX6QCY6
LinkDB
All DBs
Position
Un
AA seq
1116 aa
AA seq
DB search
MDIRKFFGVVPSGKKLVGETVKKNEKTKAAEETLKAKKGIKEIKVNSSYKEDASKQKQPN
KKKRIIYDSDSESEETVQVKSAKKQSEKSPLSSKPGKILRQDPVTYISETDEDDDFMCKK
TASKAKENGGSTNTYLGTSNMKKSEENTKNKNKPLSPIKLTPTSVLDYFGTGSVQRSDKK
MVASKRKETSQNTDDSRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKK
ARKDTEEGETFSSVQANLSKAEKRKYLPKAEKFSKEKKSYNPNKQTKCESSKESPQHSSS
LKASSKLALLKTKEECSYKETEPVPSKRKENTVELKGEKKTPKKPKSSPAKKESTSPEDS
EKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESIERDEAKSLIER
YGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIRTMPGKKSKYEIA
VEAEMEKGKSKLERTPQKNNQGKRKISPNKKESESKKNKQTPKRDSSTKTIKKETEVTNV
FRRGLDFKEQVAEETNGDSRPRELADESSESKVDSLLWVDKYKPTSLKTIIGQQGDQSCA
NKLLRWLRNWHKSSPDEKKHAAKFGKFAGKDDGSSFKAALLSGPPGVGKTTTASLVCQEL
GYSYVELNASDTRSKNSLKAIVAESLNNTSIKGFYSSGAGGAEASVSAKHALIMDEVDGM
AGTEDRGGIQELIGLIKHTKIPIICMCNDRNHPRIRSLVHYCFDLRFPRPRVEQIKGAMM
SIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSLWCARSKALTYDQAKADSHRAKKDIK
LGPFDVARKVFAAGEETAHMSLMDKSDLFFHDYSIAPLFVQENYLHVKPVAAGGDMKKHL
MLLSRAADSICDGDLVDSQIRSKQNWSLLPTQAIYASVLPGELMRGYMTQFPTFPSWLGK
HSSTGRHDRIVQDLALHMSLRTYSSKRTVNMDYLSHIRDALVQPLTSQGVEGVQDVVALM
NTYYLMKEDFENIMEISSWGGKPSPFSRLDPKVKAAFTRTYNKEAHLTPYSLQVIKTPRS
STGPMLDSDYNEELHEDDSQSDEKDQDAIETDAMIK
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atggacattcggaaattcttcggagttgtaccaagtggaaagaagcttgtaggtgaaaca
gtaaagaagaatgagaaaacaaaggctgctgaagaaactttgaaagcaaagaaaggaata
aaggaaattaaggtaaatagctcttacaaagaagatgcctccaaacaaaagcaaccaaac
aagaaaaagagaatcatctatgattcagattcagaatcagaagagacagtgcaggtaaaa
agtgccaaaaaacaatcagaaaaatcaccattgtcttctaaacctggtaaaattttacgg
caggatcctgttacctacatttcagagacagatgaagacgatgactttatgtgtaagaag
acagcctctaaagcaaaagagaatggaggatctacaaatacttaccttgggacatccaac
atgaagaagagtgaagaaaacacaaagaacaagaataaacctttatcaccaataaaactc
acacccacatcagtgctggattattttggaactggcagtgtccaaagatcagataagaag
atggtggcaagcaaaagaaaagagacttcacaaaacacagatgattccagattaaatgat
gaagccatcgccaagcaattacaacttgatgaagatgcagagctggagagacaactgcat
gaagatgaggagtttgccagaacattagccatgttggatgaggaacccaagaccaaaaag
gcccgaaaggatacggaggagggagaaacattttcatctgtccaagccaatttaagtaaa
gcagagaaacgtaaatatcttccaaaagcagaaaaattttcaaaagagaaaaagagctac
aatcctaataagcaaactaaatgtgaaagctcaaaagaatctccacaacattcctcttct
ctgaaggctagttctaagctggcactcctgaaaacaaaagaagagtgttcctataaagaa
acagaacctgtgccctcaaagagaaaagaaaataccgttgaattgaaaggagagaaaaaa
actcctaagaaacccaaaagttctcctgctaaaaaagagtctactagtccagaagactca
gaaaagaaacgcactaattatcaagcttatcgaagctacttaaatcgagaaggtcctaaa
gctctgggctccaaggaaataccaaagggagctgaaaattgcttggaaggccttacattt
gtgatcacaggagtgctggagtccattgagcgagatgaagccaagtctctaattgaacgt
tatggggggaaggtaacaggaaacgtcagcaagaaaacaaactaccttgtcatgggtcgt
gacagcggacagtccaagagtgacaaagcagcagccttggggacaaaaattattgatgaa
gatggcctattgaatctgattcgaactatgccaggcaagaagtccaagtatgaaatagca
gttgaagctgagatggagaaaggaaagtccaaattggagagaacaccccaaaaaaataac
caagggaaaagaaaaattagtccaaacaagaaggaatcagaatctaaaaagaacaagcag
actcctaaaagggacagctctacaaagacaataaaaaaggaaacagaggtaacaaatgtg
tttcggagaggcctggacttcaaggagcaggtggctgaggagacaaatggtgacagcagg
cctagggagttggctgatgagagcagtgaaagcaaagtggacagtttgctctgggtggat
aaatataagccaacctcactcaagaccatcattggacagcaaggcgaccagagctgtgcc
aacaaactgctccgctggctccgaaactggcacaaaagttctcccgatgagaaaaaacac
gcagcaaagtttggtaaatttgccggcaaagatgatggctctagttttaaagcagcgttg
ctctcaggccctccaggagttggcaagactaccacggcttctcttgtgtgtcaggaattg
ggatatagctatgtggaactaaatgcaagtgacacacggagtaagaacagtttgaaggcg
attgttgctgaatctctgaataatacaagcatcaaaggcttttattcaagtggagcaggt
ggagcagaggcttcagtaagtgcaaagcatgctctcatcatggatgaagtggacggcatg
gcgggcactgaggacaggggagggattcaggaattaattggcctgataaaacatactaaa
attcccattatttgtatgtgcaatgatagaaatcatcccaggattcgctctttggttcat
tattgttttgatcttcgttttccaagacctcgagttgaacagattaagggtgctatgatg
tctattgcatttaaggagggtttaaagattcctcctccagctatgaatgaaataatcttg
ggagccaatcaagatattagacaggttttacacaatctgagtttgtggtgtgcacgaagt
aaggcactaacgtatgaccaggccaaggctgattctcatcgggccaagaaggatatcaaa
ctgggcccttttgatgttgcccggaaagtatttgcagctggagaggagactgctcatatg
tcactgatggacaaatcggatctcttttttcatgactattcgattgcacccctctttgtc
caggagaactacctccatgtaaagcctgtagctgcagggggtgacatgaaaaagcacttg
atgctcttgagccgagcagcagatagcatatgtgatggggacctagtggacagccagatc
cggagcaagcagaattggagtcttctgcccacacaggccatttatgccagtgttcttcct
ggagagttgatgagggggtatatgacccagtttcccaccttcccgagctggctggggaag
cactcatccacaggcagacatgaccgaatcgtgcaggacctggcattgcacatgagtctt
agaacttactccagcaaaaggactgtgaacatggattacctctcgcacataagagacgca
cttgtccagcccttgacttctcaaggggtagaaggagtacaggatgtggttgcacttatg
aacacatattatttgatgaaagaagactttgagaatatcatggaaattagcagctggggt
ggtaaacccagtcctttttccagactggatcccaaggtgaaagcagccttcacaagaact
tacaataaggaggcccacctcaccccatattcacttcaggtaataaagacaccaagatcc
agtacaggcccgatgctggattctgactacaatgaagagttacatgaagatgactcccag
tctgatgagaaggaccaagatgctatagagactgatgctatgatcaag
DBGET
integrated database retrieval system
