Heterocephalus glaber (naked mole-rat): 101698157
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Entry
101698157 CDS
T02812
Symbol
Focad
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hgl03019
]
101698157 (Focad)
Messenger RNA biogenesis [BR:
hgl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101698157 (Focad)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Focadhesin
DUF3730
Motif
Other DBs
NCBI-GeneID:
101698157
NCBI-ProteinID:
XP_012925111
UniProt:
A0AAX6SGI4
LinkDB
All DBs
Position
Un
AA seq
1769 aa
AA seq
DB search
MSDDIRKRFDFPNSLIQSQGVGHLIAAVLKENSFSEKIHQSTGQTPALNLLWEECCSDNI
VVRTACCEGLVALVAQDHAEFSYVLNGILNLIPSTRNTHGLIKAIMKLLQMQALKEGQGG
GKNIQHIYTIRNHPQPLITVLEHRPDCWPLLLQQLTAFFQQCPERSEVSYVQIMAPFLWY
LYCEPSQLQEYAHLRLPLLKVLLQPRVLCDTAQPSILEQEILQLCCDMVPCLQMKDLIQT
TEAMLFIKEVYLSLLHHPVFWKIQLTQLTLQLLCVCEVSLKITGECSSLIQLLEESVELL
NEDFPVELIITEIALLLLQTPASQQKPILCLALKLLSFAEGQNIPKSSLLLVMPLLQILS
STVLEDCMSVDEEGPSRQHLALSLLEMVQQECHRDGHQKLSYGLAFPVTSIYGSVFTAYR
ILEVMREESAAGDWLACVESLLPVTTAVPMHVVLLLTYLLVEDQGPNLHQILKVIRELAQ
ADSSKVPNLIPVLMFKLGRPLEPVLYNDILYTLPVLGVHKVCIGQILRVIQLLGSTPQLR
AVTLRLLTSLWEKQDRVYPELQRFIAMSDMPSLSVGKELQWEKLIAKAASIRDICKQRPH
QHGADMLAAISQVLNECTKPDQATPAALVLQGLHALCQAEVVCIRSTWNALSPKLGCDTR
PLILKTLSELFSLVPSLTVNTAEYEKFKVQVLSFLWTHTQNKDSLVANAAYKSLSHFSTR
EHTILHLPEKIRPEVSITDESDEEEEEEVDLSVPGSCYLRLLPLTAPSVLSGLEEFFTSL
VKQEMMNMPRGIYHSALKGGIRTDQGKTIAGIPNFILKMYETNKQPGLKPGLAGGMLFCY
DVAVYQSKDGKPLHRLMASRGRSFKQMSLALVHEVHTQPSEWHRALFLPQAWLAYMYRAY
HAVLQGRIGELELQLKHGKEGPEEVQYKKSATWLWVRDMLTDEITKIAAKESPVVKCNAL
LALSSLAVVVSKHEASLTSDSDATLEVQPNFLPMKEWVTMVLNTLLVIVDSHYQARGQLF
SCFYHKSYSGENTASAIARSAAAVALSLLVPVFIISCKEKVEEILNMLTARLPGKPSADE
SQAMQIHMGLALGMFLSRLYEEKLSDISGQQMNLLLMKSLDALENCCFDTSLEYNTGCIL
GVGLVLSLMSHSSQTESRVHVAASLRKLSAYLDDSGNQSRTFQEVLAYTLSCVCTSAFSA
GIIESVEAEDIMNKLRLLVENNQQTSGFALALGNIVHGLSACGHGKAEDLGSKLLPGWVR
IVLSEGTPTVLCLAALHGMVALVGSEGDVMQLKSEAIQTSHFQGRLNEVIRTLTQVISIS
GVIGLQTNAIWLLGHLHLSTLSSNQNRTSVPTDYSYLPESSFIRAAIGFFIAGGKKGPDA
VPPSLLKIVMKPIAAVGESYQYPPANWAALLSPLMRLNFGEEIQQLCLEIMVTQAQSSQS
AAALLGLWVMPPLIHGLSLNIKKYLLESVPVWIKHVTDEQIQSFVENLMVAVFTANSPLY
NPELCPSALQGLSQAMKLPSPAYHLWSLLCEATGKIFDLLPNKIRSNMEKAAFVKLYLVS
QGRFPLMSLTDMLSVAVQHHEKETLAWMMMLSFYQARIVSHANTGVLKRMEWLLELMGYI
RNVAYQSTSVQNMVLEEALDFLLLIFATAVVAWADHEAPLLLGLSASWLPWHQNAQCGPA
SSFLGMSTVPRVTLQEALTLLPHSMLLLLQKELWKEQTQKFIDWLFSIMESPKEALSAKS
RDLLKATLLSLRTLSEFKKKAVWTRAYGW
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgatatcaggaaaaggtttgattttccaaattctcttatccagtcacagggt
gtgggtcatcttattgctgcagtcctaaaggaaaatagtttttcagaaaagatccaccaa
tccacaggccagactcctgctttgaacttgctgtgggaggagtgttgcagtgacaacata
gtggttcgaacagcctgctgtgagggtctggtggcacttgttgctcaggatcatgcagag
ttcagctatgttctcaatgggatactcaacctgattccatcgaccaggaatacacatggt
ttgataaaagccattatgaaattattacaaatgcaagctctaaaggaaggacaaggtggg
ggaaaaaacattcagcatatatatactattagaaatcatcctcagcctttgatcactgtg
cttgaacacaggcctgattgttggccattacttttgcagcagctgacagcttttttccag
caatgccctgaaaggtcagaagtttcttatgtccaaataatggcgccatttctgtggtat
ctttattgtgaaccctctcaattacaagaatatgctcaccttcgactacccctgttgaaa
gtcctgcttcaacctcgggttctctgtgatactgcacaaccatcaatattggaacaagag
atacttcagctgtgttgtgacatggttccatgtttgcagatgaaagacctgatacagaca
acagaagcaatgctatttatcaaagaagtatacttgagccttttgcatcatcctgttttc
tggaaaattcagcttacccagctgacacttcagctgttgtgtgtctgtgaagtcagctta
aagataaccggggaatgctcatctttaattcagcttttagaggaaagtgttgaacttctg
aatgaggactttcctgttgaattgattatcactgaaatagctttacttcttctacagaca
ccagcaagtcagcagaaaccaatcttatgtctagctttgaagcttctctctttcgctgag
ggtcagaacatcccaaagtcatctctgctgcttgtgatgccacttcttcagatactgtct
tctactgtgttggaagactgtatgtctgtggatgaagaaggcccctccaggcagcatttg
gccctaagccttttggaaatggtacagcaggagtgtcacagggatggccaccaaaagctc
tcctatgggcttgcattccctgtaaccagcatttatggctcagtatttacagcatatagg
attcttgaagtgatgagagaagagtcagcagcaggtgactggttggcttgcgtggagtcc
ttgctccctgttactaccgcggtgcccatgcatgttgttcttttgctgacttacctcctc
gtggaagatcaaggaccaaatcttcaccagatattaaaggtcatcagagaattagctcaa
gcagattcctcaaaggtgccaaatctgattccagttttaatgttcaaattgggaagacca
ctggaacctgtattatacaatgatatactatatactttacctgtgcttggtgttcacaag
gtgtgtattggacagattctgcgagtaatccaactgcttggaagcacccctcaactgaga
gctgtcactttgcgcctgttgacatctttgtgggaaaagcaggatcgtgtgtatcctgag
ctgcagcgattcatagccatgtctgatatgccttctctcagtgtgggcaaagagctccag
tgggagaaactgattgcaaaagcggcatcaatcagagacatatgcaagcaaaggccccat
cagcatggtgcagatatgctggcagctatttctcaggtgctgaatgaatgtaccaagcct
gatcaagctacaccagcagccttggtgttacagggtcttcatgcactctgccaagctgag
gtcgtttgcattcgttctacttggaatgctctctcgccaaagttgggttgtgacacaaga
cctctcattttgaaaaccctgagtgagctgttttctctggttccttctttgactgtcaat
acagctgaatatgagaaatttaaagttcaagttctcagcttcctctggactcacactcaa
aacaaggactcacttgtagcaaatgctgcatacaaatctctgtctcactttagtacaaga
gaacacaccatccttcatcttcctgaaaagattagaccagaagtctctattactgatgag
tcagatgaagaggaagaggaagaagtggatctttcagttcctggctcttgttatctcaga
ctcttgccacttactgctccctcggttttatcaggtttggaagaattttttacttcactt
gtgaagcaagaaatgatgaatatgccccgggggatatatcactctgcattaaaagggggt
atccgcacagaccaaggaaagactatagcagggatccccaattttatattgaagatgtat
gaaacaaataagcaaccaggattgaaacctggccttgcaggtggtatgctattttgctat
gatgttgctgtgtatcagagtaaagatggcaaaccactgcatcgactgatggccagtaga
gggcgaagtttcaagcagatgtcccttgcgcttgtgcatgaggttcacacccagccttct
gagtggcaccgtgcactttttctcccacaggcctggcttgcatacatgtatcgggcttat
catgctgtcttacagggaagaataggagagctggagctgcagttaaaacatggaaaagaa
ggacctgaggaggtacaatacaaaaaaagtgcaacctggctctgggtcagagacatgctg
actgatgaaatcaccaagattgctgctaaagaaagtccggtggtcaaatgcaatgcactg
ttagccttaagcagccttgctgtcgtcgtatccaaacatgaagccagcctcacctcagat
tctgatgccaccctggaggttcaacctaattttcttccaatgaaagagtgggttaccatg
gtgcttaatacacttctggtcattgtggatagccattaccaagccagaggacagcttttt
tcctgcttttatcataaatcctattccggtgaaaacacagctagtgccattgcccgttct
gctgctgctgtagctttgtctctccttgtgccagttttcattatctcttgcaaagagaag
gttgaggaaatcctgaacatgctgactgccaggttacctgggaaaccaagtgctgatgag
tctcaagccatgcaaatccacatgggccttgctttgggaatgtttctctctcgcctatat
gaggagaaactcagtgatatatctggccaacaaatgaaccttcttctgatgaaatctctg
gatgccctggaaaattgctgctttgacactagtcttgaatacaacacgggctgtatattg
ggagttggacttgttctgtctctcatgagccacagcagccaaacggaatctcgggttcac
gtggcagcatcgctgaggaagctgtctgcatacctagatgacagtgggaaccagagcagg
acctttcaggaggtccttgcctacacccttagctgtgtatgcacatctgcattcagtgct
ggcattattgagtctgtggaggctgaagatattatgaacaagcttcgactgttggtggag
aacaaccagcagacttcaggttttgccctggcgttaggaaacatagttcatggtttgtct
gcatgtggacatgggaaagctgaagacttgggtagcaagcttctccctggctgggtcaga
attgttctttcagagggcactcctacagtgctttgtctggcagctcttcatggcatggtg
gccttggttggctctgaaggggatgtaatgcagctgaagtccgaagctatacagacttct
cattttcaaggcagacttaatgaagtcattagaactctaactcaggtcatcagtatctcg
ggggtgattggtcttcagacaaatgcaatctggcttctaggacatcttcatctatctact
ctgtcctcaaatcaaaatagaacttcagttcctactgactatagctatttgcctgaaagc
agttttatcagagcagccattggcttcttcattgcaggaggaaaaaaaggtcctgatgct
gtgcctccttcccttctcaaaatagtgatgaaacccatagcagctgttggagaaagctac
caatatcctcctgcgaactgggctgcactcctctcgccacttatgaggctaaactttggt
gaagagatacagcaactgtgccttgaaattatggtgacccaggcacagtcatctcagagt
gcagctgcgctgttgggattgtgggtgatgccacccctcatccatggtctgagtttgaat
atcaagaaatacctcctggaatctgtgcctgtctggataaaacatgtcactgatgaacag
atccaaagttttgttgagaacttaatggtggcagtttttacagcaaattccccactatac
aatcctgagttatgcccaagcgccttacagggtctgagccaggccatgaaactgcccagc
cctgcctaccacctctggagtctgctctgtgaagccactgggaagatttttgaccttctg
ccaaataagattcggagcaacatggaaaaggctgcctttgtcaagctgtacttagtttct
caaggacgattccccctcatgagcctaactgacatgctcagtgttgctgtgcagcaccat
gagaaagagactctggcctggatgatgatgctcagcttctaccaggcacggattgtgagc
catgcaaacacaggtgtgctaaagaggatggagtggctattggaactgatgggttatatc
agaaatgttgcttaccagtcaacatctgttcagaacatggtgcttgaagaggctttggac
ttcctgttgctgatatttgccaccgcagtggtggcatgggcagaccatgaggctccactc
ctccttggcctcagtgccagttggttaccatggcatcagaatgcccagtgtgggccagca
tcaagcttccttggcatgagtacagtccccagggtcactctgcaggaggcactcactctc
cttccccatagcatgctgcttctgctgcagaaagagctctggaaggaacagacccagaag
ttcattgattggctattcagcatcatggaaagtcctaaagaagctctctctgccaagtcc
agggatctgttgaaagccaccctattgtccttgagaactctctcagagtttaagaagaaa
gccgtgtggaccagagcgtatggttggtga
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integrated database retrieval system