Heterocephalus glaber (naked mole-rat): 101698272
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Entry
101698272 CDS
T02812
Symbol
Myo5c
Name
(RefSeq) myosin VC
KO
K10357
myosin V
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
101698272 (Myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hgl03019
]
101698272 (Myo5c)
04131 Membrane trafficking [BR:
hgl04131
]
101698272 (Myo5c)
03029 Mitochondrial biogenesis [BR:
hgl03029
]
101698272 (Myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hgl04812
]
101698272 (Myo5c)
Messenger RNA biogenesis [BR:
hgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
101698272 (Myo5c)
mRNA cycle factors
P-body specific factors
101698272 (Myo5c)
Membrane trafficking [BR:
hgl04131
]
Others
Actin-binding proteins
Myosins
101698272 (Myo5c)
Mitochondrial biogenesis [BR:
hgl03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
101698272 (Myo5c)
Cytoskeleton proteins [BR:
hgl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
101698272 (Myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
TMF_TATA_bd
nSTAND3
Csm1_N
AAA_16
iREC
AAA_22
DUF3220
Nup54_57_C
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
101698272
NCBI-ProteinID:
XP_004835442
UniProt:
A0AAX6NRP8
LinkDB
All DBs
Position
Un
AA seq
1729 aa
AA seq
DB search
MAAAELYAQYNRVWIPDPKEVWQSAEIAQEYSTGDKVLHLRLEDGTELDYPSEPGPLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRVRFAEARLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNRNQSVIVSGESGAGKTVSARYAMRYFAT
VSRSSSDAQVEDRVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFNERNQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASGQRSEFRHLKLGRAEEFHYTNMGGNAVIEGVDDR
VDLVETQKTFKLLGFREDFQLDVFTVLAAILHLGNVQVTAAGTERSSVREDDGHLQVFCE
LLGLQCGQVAQWLCHRKIITSSETVVKPMTRPQAINARDALAKKIYAHLFDFVVDRINGA
LGFSGRRHSFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDV
PWTLIDFYDNRPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNSLFEKPR
MSNTSFIIQHFADKVEYECEGFLEKNRDTVHDTLVDIMRTSKFHLCASFFQENPAPSSPF
GSAITVKPAKQVVKPSSKHLRTSVGSKFRSSLALLMETLNTTTPHYVRCIKPNDQKLPFE
FDSKRVVQQLRACGVLETIRISAQSYPSRWTYIEFYGRYGILMTRQELAAGDRKRVCQVV
LRRLIQDWNQYQFGKTKIFFRAGQVAYLEKLRLDKLRQSCVVIQKRVRGWLQRRRFLHTR
HAALVIQRYFRGQQSVRKAVTAQALKEAWAAIVLQRHCRGYLVRSLYQLILMAAITIQAH
ARGFLARRRYRKMLEEHKAVILQKYARAWLARRRFQSIRRLVLNIQLAYRVQRLQKKLED
QNRENHGLVEKLTSLASLRASDTLKVQKLEAELQRAAAQQHSAEDKDRRYREAVEQKLAT
LQKHNSELEMQKEQIQLKLQEKTQELEEKMDNLTKQLFDDVQREERQRTLLEKSFELKAQ
DYEKQLQSLREEIRAVQQEKAQLRQELEEEHVAGDSLKGEVARLSQQAKTISEFEKEIEL
LQMQKIDVEKLVQSQKREMREKMSEVTRQLLESYDIEDMRSRLSEEDLGHLNEDGELWFA
YEGLKKATRVLESHFQSQKDNYEKEIEALNAKVVHLSQEINHLQKLFREESNVHENVRHE
LTRLMSENMMIPDFKQQISELEKQRQDLEIRLQEQTETVKGKPEELWSLLCGDEEEGMQK
AQNERDTKMEERLMGSVPGRQEAGEQPKEPSETEGEESRVPLENRDLEEELDMKDRVIKK
LQDQVKTLTKTIETAQDAHPSSEAKEYLGMLQYQREDEARLIQNLILDLKPRGVVVNMMP
GLPAHLLLMCVRYADAQNDAAMVRSLMNSTISAIKQVVKEHLEDFEMLSFWLSNTCHFLN
CLKQYSGEEEFMKHNSPHQNENCLKNFDLSEYRQILSDVAIRIYHQFIVVMENNIQPIIV
PGMLEYESLQGLSGLKPTGFRKRSSSIDDTDAYTMTSVLQQLSYFYSTMCQSGLDAELVR
QVAKQLFYLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQTSTARGTLEP
LSQAAWLLQVKKTTDSDAKEIAEHCPSLSAVQIIKILNSYTPIDDFEKRVTPSFVRKVQA
LLSGREDSAQLMLDTKYLFPVTFPFSASPHALELLQIPSSFKLGFLRRL
NT seq
5190 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctgagctgtacgcgcagtacaacagggtctggattcccgatcccaaggag
gtctggcagtcagcagagatagcgcaggagtacagcacgggggacaaggtcctgcatctg
cggctggaggatggcacggagctggactacccctctgagccaggcccgctgccgccgctc
cgcaaccccgacatcctggtgggtgagaatgacctcacggcgctcagctacctgcacgag
ccagccgtgctacacaacctgcgcgtgcgcttcgcggaggcccggctcatctacacctac
agcggcatcatcctggtggccatgaatccctacaagcagctgccgatctatggggacgcc
atcatccacgcctacagcgggcagaacatgggcgacatggacccgcacatctttgctgtg
gccgaggaggcctacaagcagatggccagaaacaacagaaaccaatcggtcattgtcagc
ggggagtccggggccggcaagaccgtgtccgcccgctacgccatgcgctacttcgccacc
gtcagcaggtccagcagcgacgcccaggtggaagacagggtcctggcgtccaaccccatc
acagaggctattgggaatgccaagaccacccgcaatgacaacagcagtcggtttggaaaa
tacacagaaatcagcttcaatgagagaaatcagattataggagccaacatgaggacatat
ttgctggagaaatccagagttgtctttcaatcggaaaatgaacggaattaccacattttc
tatcagctgtgtgcgtctggccagcggtcggagtttagacatctgaaactgggtcgcgcg
gaagagttccattacacgaacatgggtggcaacgctgtcatcgagggtgtggacgacagg
gtggacttggtggagactcagaagaccttcaaactgctgggcttccgggaggacttccag
ctggatgtgttcacggtcctggccgccatcctgcacctgggcaacgtgcaggttaccgca
gcaggcactgagagatcctctgtcagggaggatgatggtcacctgcaggtgttctgtgag
ctcctgggtctgcagtgtggccaggttgcccagtggctgtgccaccgaaaaatcatcacc
agctcggagacagtggtgaaacccatgaccaggccgcaggccatcaacgccagggacgca
ctggccaagaagatctacgcgcacctgtttgactttgtcgtggacaggattaacggagcg
ctgggcttctcgggcaggaggcactcgttcattggggtcctggacatttacggttttgaa
acctttgatgtgaacagctttgaacagttctgcatcaattatgccaatgagaagctgcag
caacagttcaacctgcatgtcttcaagctggagcaggaggagtacatgaaggaggacgtc
ccctggacgctgatcgacttctacgacaaccggcccgtcatcgacttgattgaagccaag
atgggcattttggagctgctggacgaagagtgcttgttaccacatggaactgacgagaac
tggcttcaaaagctgtataataattttgtcaacaagaactctctatttgagaaacccagg
atgtcaaacacatcctttatcatccagcactttgctgacaaggtggagtatgagtgcgaa
ggcttcctggagaagaacagggacaccgtgcatgacacgctggtggacatcatgaggacg
agcaagtttcatctctgcgccagctttttccaagaaaacccagctccttcctcccctttc
ggttcagcaatcaccgtgaagcctgccaaacaggtggtcaagcccagcagcaagcatctg
cggacctcggtggggagcaagttccgcagctcgctggccctgctcatggagacgctcaac
accacaacgccccactacgtgcgctgcatcaagcccaacgaccagaagctgcccttcgag
tttgactccaagagagtcgtgcagcagctgcgagcctgcggcgtcctggaaaccattcgc
atcagcgcacagagctatccgtccaggtggacctacattgagttctacggccgctacggg
atcctcatgacacggcaggagctggcggccggcgacaggaagcgggtgtgccaggtggtg
ctgcgaaggctcatccaggattggaatcagtaccagttcggcaagaccaagatcttcttc
cgggcgggacaggtggcgtacctggagaagctgcggctggacaaactgaggcagagctgc
gtggtcatccagaagcgcgtgcgtggctggctgcagaggagaaggttcctccacacgcga
catgctgcccttgtcatccagcgatacttccggggccagcagtctgtgaggaaagctgtc
actgcgcaggccctgaaggaggcctgggcggccatcgtccttcagcgccactgccgaggg
tacctggtccgcagcttgtaccagctgatcctcatggccgccatcaccatccaggcccat
gccaggggcttcctggccagaaggaggtaccggaagatgctggaggaacacaaggccgtg
atccttcagaaatacgcgcgggcctggctggccaggcgcaggttccagagcatccgccga
cttgtgctcaacatccagctggcctacagggttcagcgtttgcagaaaaaactggaggac
cagaacagggagaaccatggcctggtggagaagctgaccagcctggcctcccttcgggcc
agcgacaccctgaaggttcagaagctggaggcagagctgcagagggcagccgcccagcag
cacagcgctgaggacaaggacaggcgatacagggaggctgtggagcagaaattagcaaca
ctgcagaagcacaattcagaactggagatgcagaaagaacaaatacagctgaagcttcaa
gagaagacacaggagctggaagaaaaaatggacaacctcaccaagcagctcttcgacgac
gtgcagagagaggaacgacagagaacacttctcgagaaaagtttcgagctgaaagctcaa
gactacgagaagcagctgcagtctctgagagaagaaattcgagctgtgcagcaggagaaa
gcgcagctgaggcaggagctggaggaggagcacgtggctggggatagcctgaagggggag
gtggcccggctgagccagcaggcgaagaccatctctgagttcgagaaggagatcgagctg
ctacagatgcagaagatagacgtggagaagctggtgcagtcacagaagcgggaaatgaga
gaaaagatgtcggaggtcaccagacagcttctcgagagctacgacattgaagacatgagg
agcaggctgtctgaggaggacctggggcacctgaatgaggatggcgaactctggtttgct
tatgaagggctcaagaaggcaactcgagtcctggagagccacttccagtcccagaaggac
aactacgagaaggagatcgaggctctgaacgccaaggtggtgcacctcagtcaggaaatc
aaccacctgcagaagctgttccgagaggagagcaatgtccacgagaacgtgcggcacgag
ctcaccaggctgatgtcggagaacatgatgatcccagactttaaacagcaaatttcagag
ctagagaaacagaggcaagaccttgaaatccgcctacaggagcaaacagagacagtgaaa
gggaagccagaagagctgtggagcctgctatgtggggatgaggaggaagggatgcaaaag
gcccagaatgaaagagacaccaaaatggaagagaggctgatgggctccgtcccaggacgg
caggaggctggggagcagccgaaggagccatcagagaccgaaggggaagagtcccgcgtc
cctttggaaaacagggatcttgaagaagagttagacatgaaggacagagtgattaaaaag
ctgcaagaccaagtgaagaccctaaccaagaccattgaaacagcccaggacgcgcacccg
tcctcggaagccaaggagtacctgggcatgctgcagtaccagagggaggacgaggccagg
ctcatccagaacctcatcctggacctgaagccccgcggcgtggtcgtgaacatgatgccc
gggctgcccgcgcatctcctgctcatgtgcgtgcgctacgccgacgcccagaacgacgcg
gccatggtgcgctcgctcatgaacagcaccatcagcgccatcaagcaggtggtgaaggaa
catctagaagactttgagatgctgtccttttggctgtccaatacctgtcatttcctcaac
tgcctgaagcaatacagtggagaagaggaattcatgaagcataacagtccacatcagaat
gagaactgcttgaaaaactttgacctttccgagtacaggcagattcttagtgatgtggcc
atacgaatatatcatcaattcattgtcgtcatggagaataacatccagcccataatagtg
cctggcatgctggagtatgagagcctgcagggcctctcaggcctcaagcccactggtttc
cggaagcgctcatccagcatcgatgatacggatgcctacaccatgacctcggtgctacag
cagctgagctacttctacagcaccatgtgccagagtgggctggatgctgagctggtgcgg
caggtggcaaagcagctcttctacctcatcggggctgtgaccctgaacagcctcttcctg
cgcaaggacatgtgctcctgcaggaaggggatgcagatcaggtgcaacatcagctacctg
gaggagtggctcaaagacaagaacctgcagaccagcacagccaggggcaccttggagccg
ctgtctcaggcagcctggctgctccaggtcaagaagaccacagacagcgatgccaaggag
attgctgagcactgcccctcactgtccgccgtgcagatcataaagatcctcaactcctac
acacccatagacgacttcgagaagagagtgaccccatcctttgtgcgcaaagtgcaggcc
ctgctgagcggccgggaggactccgcgcagctgatgctggacaccaagtacctgtttccg
gtcaccttccccttcagcgcctcgccgcacgccctggagctactgcagatccccagcagc
ttcaagctgggcttcctgcgccgcctctag
DBGET
integrated database retrieval system
