KEGG   Heterocephalus glaber (naked mole-rat): 101698559
Entry
101698559         CDS       T02812                                 
Symbol
Cpsf4
Name
(RefSeq) cleavage and polyadenylation specific factor 4
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
hgl  Heterocephalus glaber (naked mole-rat)
Pathway
hgl03015  mRNA surveillance pathway
hgl05164  Influenza A
Brite
KEGG Orthology (KO) [BR:hgl00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    101698559 (Cpsf4)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    101698559 (Cpsf4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hgl03021]
    101698559 (Cpsf4)
   03019 Messenger RNA biogenesis [BR:hgl03019]
    101698559 (Cpsf4)
Transcription machinery [BR:hgl03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     101698559 (Cpsf4)
Messenger RNA biogenesis [BR:hgl03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     101698559 (Cpsf4)
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 zf-CCCH_3 Torus zf-CCCH_2 zf-CCHC zf-CCCH_4 zf-C3H1 zf-CCHC_3 Nab2-like_zf-CCCH_
Other DBs
NCBI-GeneID: 101698559
NCBI-ProteinID: XP_004840568
UniProt: A0A0P6JB34
LinkDB
Position
Un
AA seq 271 aa
MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPP
LPQQTQPPTKQSSNPPLQRSPSCSLIQLTSQNSSPNQQRAPQVIGVMQSQSSSAGNRGPR
PLEQVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq 816 nt   +upstreamnt  +downstreamnt
atgcaggaaatcatcgccagcgtggaccacatcaagttcgacttggagatcgccgtggag
cagcagctcggggcgcagccgctgcccttccccggcatggacaagtcgggcgctgctgtc
tgtgaattctttttgaaagcagcctgtggcaaaggaggcatgtgtccattccgccacatc
agtggtgagaagacagttgtgtgcaaacactggctgcggggactgtgcaagaaaggtgac
cagtgtgagttcttacacgagtatgacatgaccaagatgcccgagtgctacttctactcc
aaatttggggagtgcagcaacaaggagtgccccttcctgcacattgacccggagtccaag
atcaaggattgcccttggtacgaccgcggcttctgtaagcatggtcctctgtgcaggcac
cggcacacgcggagagtcatctgtgtgaattacctggtgggattctgcccagagggcccc
tcgtgtaaattcatgcacccccgatttgaactgcctatgggaaccactgagcagccccca
ctgccgcagcagacgcagcctccgacaaagcaaagtagcaatccgccgttacagaggtcg
ccctcgtgctccctgatccagttaacgagccagaactcttctcccaaccagcagagggcc
ccgcaggtcatcggggtcatgcagagccagagcagcagcgcagggaaccgcggaccccgg
ccgctggagcaggtcacctgctacaagtgtggtgaaaaaggacactacgccaacagatgc
accaaagggcatttggcctttctcagtggacagtga

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