Heterocephalus glaber (naked mole-rat): 101700152
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Entry
101700152 CDS
T02812
Symbol
Smc1b
Name
(RefSeq) structural maintenance of chromosomes 1B
KO
K06636
structural maintenance of chromosome 1
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl04110
Cell cycle
hgl04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101700152 (Smc1b)
04114 Oocyte meiosis
101700152 (Smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hgl03036
]
101700152 (Smc1b)
Chromosome and associated proteins [BR:
hgl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
101700152 (Smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
101700152 (Smc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
DUF2935
Motif
Other DBs
NCBI-GeneID:
101700152
NCBI-ProteinID:
XP_004845462
UniProt:
A0AAX6P7L3
LinkDB
All DBs
Position
Un
AA seq
1237 aa
AA seq
DB search
MGYLKVLLVENFKSWRGRQVIGPFERFTCIIGPNGSGKSNIMDALSFVMGEKITNLRVKS
IQELIHGAHVGKPVSSSASVRIVYVEESGEEKTFARIIRGGCSEFYFGDNPVTRSAYIAE
LEKIGIIGKARNCLVFQGTVELISMKKPKERTRFFEEISTSGELMEEYEEKKRKLQKAEE
NAQFNFNKKKNAAAERKHAKLEKEEADRYQSLLEELKTNKIQLQLFQLYHNEKKIHFLNV
ELEHVNRDLSVMKESHFHHENIVKAKKKEHGMLTRQLQQTEKELKSLEALLNQKRPQYIK
AKENTSHHLKKLDISKKSIKDCEKQCSKQEDDIRALQAELVDLDSAWKSFEKQIEEEILH
KERGIELEPSQLDHYKELKEQVRKKVAIMTQQLKKLQWEQKAEKERLALEKRRHGEVQGN
LKQIKEQIEDHKKRIEKLEEYIKTCMDFLNEKRQHEETLVDEIGKAKSRMSDVNEELNRI
MSDLQNAGIDKHEGKREQKRAEVLEHLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKLFGR
YMVAIVVTSEKVAKDCIRFLKEERAEPETFLALDYLDIKPINERLREIKGCKMMIDVIKT
QFPQLKKVIQFVCGNGLVCETVEEARHIAFGGPERRKTVALDGTLFLKSGVISGGSSDLK
HKARCWDEKELKNLRDRRNQLVQELKDLMKILRKETDLKQIQTLAQGTHTRLRYSQSEVE
IIKKKHLVAAHREQSQLQSELLNIESQCAMLSEGIKEQQQRIEGFQEKINKVEDEIFHDF
CEEIGLENIREFENKHVKQQQEIDQKRLEFEKQKTRLNIQLEYSRSLLKKKLSKINTLKE
TIQKSGEDIDSLKKIEDNCLQVVDELMAKQKQLKDIFVTQNSSAQKVQSQLEEERKKFLA
VDREVGKLQKEVVIIQTSLEQKRLERHNMLLDCKVQNIEITLLLGSLDDIIEVELGTETE
STQATTDIYEKEAAMEVDYSPLQEDLKALLSDKEVEARLVLLVQQVASQEENLLKTAAPN
LRALQKLKTVRDKFQESTDAFEASRKEARMCRQEFEQVKKRRYDLFNQCFEHVSVSIDHI
YKKLCRNHSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGERCVAALALLFAV
HSFRPAPFFVLDEIDAALDNTNIGKVSSYIREQTQEQFQMIIISLKEELYSRADALIGVY
PEHDGVLFSQVLTLDLRPYPDKEEGQGSRGRREPQPQ
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgggctacctgaaggtgttgctcgtggagaacttcaaatcctggcggggtcgccaggtc
attgggcctttcgagaggtttacgtgtatcatcggccccaacggctccggaaaatctaat
ataatggatgcacttagctttgtcatgggagagaaaataactaatttaagagtgaaaagt
attcaagaacttattcatggtgcacatgttggaaaacctgtttcttcttctgcaagtgta
agaattgtatatgtggaggaaagtggagaagagaaaacatttgcacggattatccgaggg
ggatgctcggaattctattttggtgataaccctgtgactcgctctgcctacatagcagag
ttggagaagataggcataataggcaaagcacgaaactgtcttgtttttcagggaactgta
gagttgatttccatgaagaaacccaaagaaagaacccggttttttgaggagatcagcact
tctggagagcttatggaagagtatgaggaaaagaaaagaaagttacaaaaggctgaggaa
aatgcacaatttaattttaataagaaaaagaatgcagctgcagagcgtaagcatgcaaaa
ttagagaaagaagaggcagaccgttaccaaagtctccttgaagaactgaagacaaacaag
atacaactgcagctgttccaactatatcataatgagaaaaaaattcatttcctgaatgtt
gagttagagcatgtgaatagggatttgagtgtcatgaaagagtcccattttcatcatgaa
aacatagttaaagccaagaaaaaggagcatggaatgctaactagacaactacaacaaaca
gagaaagaattgaaatctcttgaagcacttttaaatcagaagaggcctcagtacattaaa
gccaaagaaaatacttctcaccacctcaagaaattagatatatctaagaaatcaataaag
gattgtgaaaaacagtgttctaagcaggaagatgacataagagccctgcaggcagagctg
gttgatttagatagtgcatggaaaagttttgaaaaacagattgaagaagaaatcttgcat
aaagagcgaggcattgaactggaacccagtcagctggatcattataaagaacttaaggag
caagtaagaaagaaagtagctataatgactcaacaactgaagaagctgcaatgggaacag
aaagcagagaaagaaagactggcattggagaagaggaggcatggagaagttcagggaaat
ctaaaacaaataaaagaacaaatagaagatcataaaaaacgaatagagaagttggaggaa
tacataaagacatgcatggacttcttaaatgagaaaagacagcacgaagaaaccctggta
gatgaaattggaaaagcaaaatcaagaatgtctgatgttaatgaagaattgaatcgtatt
atgagtgacttgcagaatgctggaattgataaacatgagggaaaacgtgagcagaaaaga
gcagaagtgctggagcatcttaaaagactgtacccagattccgtgtttggaaggctgctt
gacctgtgtcaccccattcacaagaagtaccagctggctgtgactaaactctttggtcgg
tacatggttgccattgtagtcacctctgaaaaggtggcaaaagactgtattcgatttctg
aaggaggaaagagctgaacctgagacattccttgctctagattaccttgatataaaacca
atcaatgaaagactaagggagattaaaggctgtaaaatgatgattgatgtcataaagact
cagtttcctcagctgaagaaagtgattcaatttgtgtgtggaaatggtcttgtctgtgag
actgtggaagaagccagacatattgcattcggtggacctgaaagacggaaaacagtagct
cttgatggaacactgtttttaaagtccggggtcatctctggaggatcaagtgacttaaaa
cacaaggctagatgttgggacgaaaaagagttaaagaatctaagagaccgaagaaaccag
ctggtccaagagctaaaggatttaatgaagatactccgcaaggaaacagacttgaaacaa
atacagactttagcacagggaactcatacacgactcagatattcacagagtgaagtggag
ataattaaaaagaagcaccttgttgctgctcacagggagcaatctcaactacaaagcgaa
ctactaaacattgagtctcagtgtgctatgttgagtgaagggatcaaagaacaacaacaa
agaattgaaggatttcaagaaaagataaataaggtagaagatgaaattttccatgacttc
tgtgaagaaattggcctggaaaatattcgtgaatttgaaaataaacatgttaaacagcaa
caagaaattgatcaaaaaaggttagaatttgaaaaacaaaaaacccggcttaatattcag
cttgaatatagtcgcagtctgctcaagaagaaactgagtaagatcaacacgttaaaagaa
actatccagaaaagtggcgaagacattgacagcctgaagaagattgaagacaactgtctg
caagtcgtggatgaactcatggcaaagcagaagcaacttaaggacatatttgtcactcag
aattccagcgctcagaaagttcaatctcagcttgaggaggaacggaagaaatttttggct
gttgatagggaagtaggaaaattgcaaaaagaagttgtgatcattcagacttctctggaa
cagaaacgcctagagaggcataacatgctgctggattgcaaagttcaaaatattgaaata
actcttttgttggggtcactggatgacatcattgaagtggagttgggaactgagacagaa
agtacacaggcaacaactgatatctatgaaaaagaagctgctatggaagtggactacagc
cctctacaggaggatttgaaggctctgctgtcagataaggaagtggaggcccgccttgtg
ctccttgtgcagcaagtggcatcccaggaagaaaacttgctaaagacagcagccccgaac
ctgcgagccctacagaaactgaagacagtcagggacaagttccaggagtccacagatgct
tttgaggccagcagaaaggaagccaggatgtgtaggcaagaatttgaacaggtgaaaaaa
aggagatacgatcttttcaaccagtgttttgagcacgtctcagtctcaattgatcacatc
tacaagaagctctgccgaaaccacagtgcccaagcatttcttagcccagagaaccctgaa
gaaccttacttggagggaattagctacaactgtgtggccccgggcaagcggttcatgcct
atggacaacctgtcagggggagagaggtgcgtggcggccctggccctcctgtttgctgtg
cacagcttccggcctgctccattctttgttctggatgaaatagatgcagccctggacaat
actaacatcggcaaagtctccagttacatcagagagcagactcaagaacagttccagatg
ataatcatctccctaaaagaagagctctattccagagccgatgcattgataggcgtctac
ccagagcacgacggagtcttgttcagccaagtgctgaccctagatctgcgtccctaccca
gacaaggaagaaggacagggcagcagaggacgccgagagccccagccccagtag
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