Heterocephalus glaber (naked mole-rat): 101700987
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Entry
101700987 CDS
T02812
Symbol
Smarca4
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03082
ATP-dependent chromatin remodeling
hgl04714
Thermogenesis
hgl05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101700987 (Smarca4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101700987 (Smarca4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101700987 (Smarca4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hgl03021
]
101700987 (Smarca4)
03036 Chromosome and associated proteins [BR:
hgl03036
]
101700987 (Smarca4)
Transcription machinery [BR:
hgl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101700987 (Smarca4)
Chromosome and associated proteins [BR:
hgl03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
101700987 (Smarca4)
Chromatin remodeling factors
BAF complex
101700987 (Smarca4)
PBAF complex
101700987 (Smarca4)
GBAF(ncBAF) complex
101700987 (Smarca4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Htt_C-HEAT
Motif
Other DBs
NCBI-GeneID:
101700987
NCBI-ProteinID:
XP_004865603
LinkDB
All DBs
Position
Un
AA seq
1654 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPISTQG
PGGYPQDNMHQMHKPMESLHEKSMSEDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGTDPQALGQQSRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP
GPGPGPGPAPPNYSRPHGMVGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMVNAAAPT
STPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPLVPLHQKQSRITPIQ
KPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQL
RQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYL
NSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEE
GYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQT
PAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSD
SEESGSEEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDD
EYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGI
LADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKG
SPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQV
LNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDL
NEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGV
LLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLY
RASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRG
MLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQ
NEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQ
DESRHCSTGSGSASFAHTAPPPAGVTPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLF
MRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKE
VDYSDSLTEKQWLKTLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDK
DDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKE
LPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVL
QSVFTSVRQKIEKEEDSEGEESEEEEEAEEEGSESESRSVKVKIKLGRKEKAQDRLKGSR
RRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagacccacccctgggcggaactcctcggccaggcccttccccaggccca
ggcccctcacctggagccatgctgggccctagccctggcccctcaccgggctcagctcac
agcatgatggggcctagccccgggcctccctcagcaggacaccccatctccacgcagggg
cctggagggtaccctcaggacaacatgcaccagatgcacaagcccatggagtccctgcat
gagaagagcatgtcggaggacccacgctacaaccagatgaagggcatggggatgcgctcg
ggtggccacgcaggcatgggccccccacccagccccatggaccagcactcccaaggttac
ccctcgcccctgggcggctccgagcatgcctccagtcctgttccagccagcggcccatct
tcgggcccccagatgtcgtctgggccaggaggggccccgctggacggcactgacccccag
gccttggggcagcagagccggggccccaccccattcaaccagaaccagctgcaccagctt
cgggcacagatcatggcctacaagatgctggccaggggacagcccctgcctgaccacctg
cagatggccgtgcagggaaagcggcccatgcctgggatgcagcagcagatgcccacgcta
cctccgccctctgtgtctgccacagggcctgggcctggccctggccctggccctggccct
ggccctggccctggcccgggaccagcacctccaaattatagcaggcctcatggtatggta
gggcccaacatgcctcccccaggaccctcaggtgtgccccccgggatgcccggccagccc
cctggagggcctcccaagccctggcctgaaggccccatggtgaacgctgctgctcccacg
agcacccctcagaagctgatccccccacagccgacgggccgtccttcgcccgcaccccct
gccgtcccacccgctgcctcgcctgtgatgccgccccagacccagtccccggggcagccg
gcccagcctgcgcccttggtgccactgcaccagaagcagagccgcatcactcccatccag
aagccccggggcctggaccccgtggagatcctgcaggagcgcgagtacaggctgcaggct
cgcatcgcacaccgcattcaggaacttgaaaatctccccggctccctggctggggatctg
cgaaccaaagcaaccatcgagctcaaggccctccggctgctgaacttccagcggcagctg
cgccaggaggtggtagtgtgcatgcgcagggacacggccctggagacagccctcaatgcc
aaggcctacaagcgcagcaagcggcagtccctgcgtgaggcccgaatcaccgagaagctg
gagaagcagcagaagatcgagcaggagcgaaagcggcgccagaagcaccaggaatacctc
aatagcattcttcagcacgccaaggatttcaaggaataccacagatccgttacgggaaaa
atccagaagctgaccaaggcggtggccacgtaccatgccaacacggagcgggagcagaag
aaagaaaacgagcgcatcgagaaggagaggatgcggaggctcatggcggaagatgaagag
ggttaccgcaagctcatcgaccagaagaaggacaagcgcctggcctacctcctgcagcag
acagacgagtatgtggccaacctcacggagctggtgcggcagcacaaggccgcccaggtc
gccaaggagaaaaagaagaagaagaagaagaagaaggcagaaaacgctgaaggacagacg
cccgcgatcggacccgatggcgagcctctggatgagaccagccagatgagtgacctccct
gtgaaggtgatccacgtggagagtggcaagatcctcacaggcacagacgcccccaaagct
gggcaactggaggcctggcttgagatgaacccggggtatgaggtggcgccgaggtctgat
agtgaagagagcggctcagaagaagaagaggaggaggaggaggaagagcagccacagcca
gcacagcctcccaccctgcctgtggaggagaagaagaagatcccagaccctgacagcgac
gatgtctctgaggtggacgcacggcacatcattgagaatgccaagcaagacgttgatgat
gagtatggcgtgtcccaggcccttgctcgcggcctgcagtcctactatgctgtggcccac
gctgtcaccgagagagtggacaagcagtcagcactcatggtcaacggcgtcctcaagcag
taccagatcaaaggcttggagtggctggtgtccctgtacaacaacaacctgaacggcatc
ctggctgacgagatgggcctggggaagaccatccagaccatcgcgctcatcacatacctc
atggagcacaagcgcatcaacgggcccttcctcatcatcgtgcctctctcgacgctgtcg
aactgggcatacgaatttgacaagtgggccccttccgtggtgaaggtgtcctacaagggc
tctccagcagcaagacgagctttcgtcccccagctccgcagtggcaagtttaacgtcttg
ctgacgacctacgaatacatcatcaaagacaagcacatcctcgccaagatccgctggaag
tacatgatcgtggacgagggccaccgcatgaaaaaccaccactgcaagctgacgcaggtg
ctcaacacgcactacgtggccccacgtcggctgctgctcacgggcacaccactgcagaac
aagctgccggagctctgggcgctgctcaacttcctgctgcccaccatcttcaagagctgc
agcacctttgagcagtggttcaacgcaccctttgccatgacaggggagaaggtggacctg
aacgaagaggaaaccatcctcatcatccgtcgtttgcacaaagtgctgcggcccttcctg
ctccggcggctcaagaaggaagtcgaggcccagctgcctgagaaggtggagtatgtcatc
aagtgcgacatgtctgcgctccagcgcgtgctctaccggcacatgcaggccaagggggtg
ctgctcactgacggctctgagaaggacaagaagggcaaaggtggcaccaagaccctgatg
aacaccatcatgcagctaaggaagatctgcaaccacccctacatgttccagcacattgag
gagtccttctctgaacacttgggcttcaccggcggcatcgtgcaagggctggacctgtat
cgagcctcaggcaaatttgagcttctcgatagaatcctccccaaacttcgtgccaccaac
cacaaagtgctactgttctgccagatgacctccctcatgacgatcatggaagattacttt
gcgtatcgcggctttaaatacctcaggctggacggaaccacaaaggcggaggaccggggc
atgctgctcaagaccttcaacgagcccggctccgagtacttcatcttcctgctcagcacc
cgcgctggtgggctgggcctcaacctgcagtcagcagacactgtgatcatcttcgacagc
gactggaaccctcaccaggacctgcaagcgcaagaccgggcacaccgcattgggcagcag
aacgaggtgcgcgtgctccgcctctgcaccgtgaacagtgtggaggagaagatcctggcg
gctgccaagtacaagctcaacgtggaccagaaagtgatccaggcgggcatgtttgaccag
aagtcgtccagccacgagcggcgcgccttcctgcaggccatcctggagcacgaggagcag
gacgagagcagacactgcagcacgggcagcggcagtgccagcttcgcccacacggcccct
ccgccagcgggcgtcacccccgacttggaggagccacctctaaaggaggaagacgaggtg
cctgatgatgagacggtcaaccagatgattgcccggcacgaggaggagttcgacttgttc
atgcgcatggacctggaccgccggcgtgaagaggctcgcaaccccaaacggaagcctcgt
ctcatggaggaggacgagctcccatcctggatcatcaaggatgatgcggaggtggagcgg
ctgacgtgtgaggaggaggaggagaaaatgtttgggcgtggctcccgccaccgcaaggag
gtggactacagcgactcgctgacagagaagcagtggctcaagaccctgaaggccatcgag
gagggcacgttggaggagatcgaagaggaggtccggcagaagaaatcctcgcgaaagcgc
aagcgggacagcgatgccggctcctcgacaccgaccaccagcacccgcagccgcgacaag
gacgacgagagcaagaagcagaagaagcgtggacggccgcccgctgagaagctctcccca
aacccgcccaacctcaccaagaagatgaagaagatcgtggacgccgtgatcaagtacaag
gacagtagcagtggacggcagctcagtgaggtattcatccagttgccctcccgcaaggag
ctgcctgagtactacgagctcatccgcaagcctgtggacttcaagaagatcaaggagcgc
atccgcaaccacaagtaccgtagcctcaacgacctcgaaaaggacgtgatgctgctctgc
cagaacgcgcagaccttcaacctggagggctcgctgatctacgaggactccatcgtgctg
cagtcggtcttcaccagtgtccggcagaagatcgagaaggaggaggacagtgagggcgaa
gagagcgaggaggaggaggaagccgaggaggagggctcggagtccgagtcccgctctgtc
aaggtgaagattaagctgggccgcaaggagaaggcccaggaccggctcaagggcagccgc
cgcaggcccagccgagggtcccgggccaagccggtcgtgagcgacgacgacagtgaggag
gagcaggaggaggaccgctcaggaagtggcagcgaggaggactga
DBGET
integrated database retrieval system
