Heterocephalus glaber (naked mole-rat): 101701011
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Entry
101701011 CDS
T02812
Symbol
Lig3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101701011 (Lig3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hgl03400
]
101701011 (Lig3)
Enzymes [BR:
hgl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
101701011 (Lig3)
DNA repair and recombination proteins [BR:
hgl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
101701011 (Lig3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Synaptonemal_3
Motif
Other DBs
NCBI-GeneID:
101701011
NCBI-ProteinID:
NP_001297204
UniProt:
A0A0A7HV67
LinkDB
All DBs
Position
Un
AA seq
1016 aa
AA seq
DB search
MTLTFKILFSRNLQALGRKELCSFREQSHWSGIRQLSSWSRTDLLHGHFLLQRRKPVLPL
QGGHLRPQATCFIFLPGSHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGICRI
GKVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDSEKEQITQ
HIADLSSKAASTPKKKAVVQAKLTAAGQVTSPVKGSSFVTSTNPRKFSGFSAAKPNNSEQ
APSSPAPKTSLSSSKCDPKHKDCLLREFRKLCAMVADNPSYNSKTQIIQDFLRKGSAGDG
FHGDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCNADDMARDLEQGDVSETIRVFF
EQSKSFPPAAKSLLTIQEVDEFLLQLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKH
DLKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERILQNEQEVKKEPGRKRALSVQASLM
TPVQPMLAEACKSIEYAMKKCPNGMFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKV
AHFKDYIPQAFPGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCV
YFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVTKASDLADMINQVIREGLEGLV
LKDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDP
GSQKWCTVTKCAGGHDDATLTRLQKELDMVKISKDPSKIPSWLKINKIYYPDFIVPDPKK
AAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKEKADF
TIVAGDEGGSTTGGSSGENEGTSGTAVSHKAPRASPKPSASARKAEGKLSNPNSKDSNKL
NAKPSPVKLGEKLALKSSPVKVGEKRKAADDSPCHAKVKVLLDIFTGVRLYLPPSTPDFG
HLRRYFVAFDGDLVQEFDVASATHVLGNRDKNPEAQLVSPEWIWACIRKQRLVAPC
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgactttgactttcaagatcctcttctcacgaaacctccaagcacttggacgaaaagag
ctgtgttcattccgagaacagtctcattggtctggcataagacagctcagtagttggtca
agaacagatctgcttcatgggcacttcctcctccagagaagaaagcctgttctgcctttg
cagggaggccatctaagaccacaagccacctgcttcattttcttgccagggtcgcatgtg
ggactctgcagtggcccatgtgagatggctgagcaacgattctgtgtggactatgctaag
cgcggcacagctggctgcaaaaaatgcaaagaaaagattgtgaagggcatatgccgaatt
ggcaaagtggtacccaacccattctcagaatctgggggtgatatgaaagaatggtaccat
attaaatgtatgtttgagaaactggagcgagctcgggccaccacaaaaaaaattgaagac
ctcactgagctggaaggctgggaagaactggaagatagcgagaaggaacagataactcaa
catattgcagatctatcttctaaggcagcaagtacaccaaagaaaaaagctgttgttcag
gctaagttgacagccgctggccaggtgacttccccagtgaaaggctcctcatttgtcacc
agtaccaatccccggaaattttctggtttttcagcagccaagcccaacaattctgagcaa
gctccctcaagccctgcgcctaagacaagtctctcttcaagcaaatgtgaccccaagcac
aaggattgtctgctacgggagtttcggaagttgtgtgccatggtggctgataatcctagc
tataactcaaagacccagatcatccaggacttcttgcggaaaggctcagcaggagatggt
ttccacggcgatgtatatctaacagtgaagttgctgctaccaggtgtcattaagagtgtt
tacaacttgaatgataagcagattgtgaagcttttcagccgcatttttaactgcaatgca
gatgatatggcacgagacctagaacagggtgacgtgtcagagacgatcagagtcttcttt
gagcagagcaagtctttccctccagctgccaagagcctccttactatccaggaagtagat
gaatttcttctgcaactctccaagctcaccaaggaggatgagcagcagcaggccctgcag
gacattgcctctaggtgtacagccaatgaccttaagtgcatcatcaggttgatcaaacat
gatctgaagatgaactcaggtgcaaaacatgttttagatgcccttgaccccaatgcctat
gaagctttcaaagcctcacgcaatctgcaggatgtggtggagcggatccttcaaaatgag
caagaggtaaagaaggagccaggccggaaacgggctctgagcgtccaggcctcactgatg
acccccgtgcagcctatgctggcagaggcctgcaagtccatcgagtatgcaatgaagaag
tgtcccaatggcatgttctctgagatcaaatatgacggtgagcgagtccaggtgcataag
aatggggaccacttcagctacttcagccgcagtctcaagcctgtcctgcctcacaaggtg
gcccactttaaggactacatcccccaggcttttcctgggggtcatagcatgatcttggac
tctgaggtactcctgattgacaacaaaacaggcaaaccactgccctttgggactctgggt
gtgcacaagaaagctgctttccaagatgctaatgtctgcctgtttgtttttgattgtgtc
tacttcaatgatgtcagcttgatggacaggcccctttgtgagcggcggaagtttcttcat
gacaacatggttgaaattcccaaccggatcatgttctcagaaatgaagcaagttacaaaa
gcttcggacttggctgatatgataaaccaagtgatccgggagggcttggaagggctggtg
ctgaaggatgtgaagggtacgtatgagcctgggaagcggcactggctgaaagtgaagaaa
gactatttgaatgagggggccatggccgacacagctgacctggtggttcttggggccttc
tatggacaaggcagcaaaggtggcatgatgtcaatcttccttatgggctgctatgatcca
ggcagccagaagtggtgcacagtcaccaagtgtgcaggaggccatgatgatgcaacactc
acccgcctgcagaaggaactggacatggtgaagatcagcaaggaccccagcaaaataccc
agctggctgaagatcaacaagatatactatcctgacttcatcgtcccagacccaaagaaa
gctgctgtgtgggagatcacaggagcagaattctccaaatctgaggcacacacagctgat
gggatctccattcgattccctcgctgcacccgaatccgggatgacaaggactggaaatct
gccaccaatctcccccaactcaaggaactgtaccagctgtccaaggagaaggcagacttc
actatagtggctggagatgaggggggctccactacaggaggcagcagtggcgagaatgag
ggcacctcagggactgctgtttctcacaaggcacccagagcctcccccaaaccttctgcc
agtgccaggaaggctgaagggaagctgagtaaccctaacagcaaagacagcaacaagctg
aatgcaaagccttcccctgtgaaactgggagagaaactggccttgaagtcttccccagtg
aaagtaggggagaagaggaaagctgctgatgacagcccatgccatgcaaaggtgaaggtg
ctgctggacatctttactggggtgcggctctacttgccaccctccacaccagacttcggt
catctcagacgctactttgtggcattcgacggggacctggtgcaggaatttgacgtggcc
tcagccacccacgtgctcggtaacagggacaagaaccctgaggcccagctggtctcccca
gagtggatttgggcatgtatccgtaaacagaggctagtagctccctgctag
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integrated database retrieval system
