Heterocephalus glaber (naked mole-rat): 101701280
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Entry
101701280 CDS
T02812
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein-like
KO
K12857
Prp8 binding protein
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101701280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hgl03041
]
101701280
Spliceosome [BR:
hgl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
101701280
Complex C
U5 SnRNP specific factors
101701280
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EML
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Beta-prop_RIG_1st
WDR54
WD40_like
Motif
Other DBs
NCBI-GeneID:
101701280
NCBI-ProteinID:
XP_012930523
LinkDB
All DBs
Position
Un
AA seq
358 aa
AA seq
DB search
MIEQQKCKGPELPLVPVKQQRHELLLAAAGSGPGAGQQQATPGALLQAGPPRCSSLQAPI
MLFSGHEGEVYCCKFHPSGSTLASAGFDRLILLWNVYGDCDNYSTLKGHSGAVMELHYNT
GGSMLFSASTDKTVAGWESETGERVKRLKGHTSFVNSCSPARRGPXLVFTGSDDGTVKLW
DIRKKAAIQTFQNTYEVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT
GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKXRCVKIFQGNVHNFEKNLLRCSWSPYGSK
IAAGSVDRFVYVWDTTSRRILYKLPGHAGSINIVAFHPDEPIILSASSDKRLYMGEIQ
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgatagaacagcagaagtgcaagggcccggagttgccactggttccagtcaagcagcag
cgacatgagttgctcctggcagcggcggggtcaggccctggagcagggcagcagcaggca
accccgggagctttacttcaagcgggacctccaaggtgttcctcccttcaagccccaatc
atgctattctccggacatgaaggagaagtgtactgctgcaagtttcaccccagtggctcc
accttggcatctgcaggatttgaccgattaatactgctgtggaatgtctatggtgactgt
gataattattccacactgaaaggacatagtggagcagtgatggagctccattataacaca
ggtggcagcatgctcttctccgcatccacagataaaactgtggcaggatgggagagtgaa
acaggcgaaagggttaaaaggctgaagggacatacttcctttgtaaattcctgttcccca
gccaggaggggaccctagcttgtctttactggcagcgatgatggtacagttaagctttgg
gacatccggaagaaagcagctatccagacgtttcaaaacacgtacgaggtattagctgtg
acctttaatgacacaagtgatcagattatctctggtggaatagacaatgatataaaggtc
tgggacctacgccaaaacaagctaacctacaccatgagaggccatgcagattcagtgact
ggtctgagtttaagttctgaaggttcttatctcttgtccaacgcaatggataatacagtg
cgtgtctgggatgtccggccatttgcccctaaatagaggtgtgtaaagatatttcaagga
aatgtgcataactttgaaaagaatctcttgagatgttcttggtcaccttatgggagcaaa
atagcagctggctcagtggacaggtttgtgtatgtgtgggacaccacaagcaggagaata
ctgtataagctgcctggccatgctggctccatcaatatagtagctttccatcctgatgag
cccatcattctctcagcatctagtgacaagagactgtatatgggggagattcagtga
DBGET
integrated database retrieval system
