Heterocephalus glaber (naked mole-rat): 101701527
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Entry
101701527 CDS
T02812
Symbol
Tarbp1
Name
(RefSeq) TAR (HIV-1) RNA binding protein 1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hgl03016
]
101701527 (Tarbp1)
03036 Chromosome and associated proteins [BR:
hgl03036
]
101701527 (Tarbp1)
Enzymes [BR:
hgl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
101701527 (Tarbp1)
Transfer RNA biogenesis [BR:
hgl03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
101701527 (Tarbp1)
Chromosome and associated proteins [BR:
hgl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101701527 (Tarbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
101701527
NCBI-ProteinID:
XP_004854689
UniProt:
A0AAX6PM65
LinkDB
All DBs
Position
Un
AA seq
1592 aa
AA seq
DB search
MEWVLAEALLAQSGDPRVLLGALCRGEASAERVETLRFLLQRLEDAGAGQGALPEAAREL
AAGYLVPLLHGRPGGHDPGPPRSRRRVLRAAGAALRSCARLAGSPPLAAALAEEALRELR
AGRPPGAEAALEILAAVAPCLRPHEDGALLERVAQAAVALALDAEGPGRAEGAAALVTAL
GKGGGVALTAVWGALASSGNRSEPGRVGPELRLLSALAEKLLPEPGACDAGPDARRCGRF
WRTVQAGLGCAEDALTRKRARYLLQRAVEVSAERGVGCTCGPQEGTGPSLFWWSKKKKDE
LLKFWENYILIMETLEGNQIHVIKPVLPKLNNLFEYAVSEENGCWLFHPSWHLCIYKRMF
ESENKILTKEGIIHFLELYETVALPFSLEFSEFIIGPLMDALSESSLYSRPTGQLVGSGS
PLGLKLQKFLVTYVSLLPEEIKSNFLLKFLQKMRSRHWCAVPILFLSKALANIPRCKALG
LEGLLALRDVIQCTMITHHILLRGAAQCFLLQTAMHLVDVEKVSLSDVSSFLISLKQEES
LGRGTTLWTELCDWLCVNERSFRPSSICGPDGLPETSLNAYVKNLVQEYITSPAWETGES
CFMPDWSEARLTALMILLAVDVEGMKIEYSEKRRTQNVLRIFLDPLLDALVKLGTNAYVP
LLRTDRSLQLLVKLLHTCMLKGSSPQDDEVSAFLQSSIMSATESISQFVLRRLTMRELQK
VADLDRCHLYLMLLTELTNLHLKAGWKRAYSIFRVLSPLKNASMRHLQEMESGKELSLGD
QIQKVVSMATLATVCEASTLQPVPELDSLDAEPMDRFLSAFPFNQTLQKPRAEEQGQCAH
PMESSSFFEESSSQGWGRVVAQYIHDQWVCLSFLLEKYHTLVPATDGTIPEPLLPAIQMP
AQTLRSALDTLSILPSEQVLPVFRCMKVLVPKLLTSAESLCIESFDMAWKIISSLSNTQL
TFWPNLKGFVQFVFDNRVLTIAAKIKSQAYFKIKEIMYKIIEMSAIRTGIFNILISYCCQ
SWIVSDSKRSLFSAKNYSELVLEACIFGTVFRRDQRLIQDVQTFIENLGQDCAANVVMEN
TKREDYYVRICAVKFLCLLDGSNASHKLFIEDIAMKLLDKDELVSKTRTRYYENSLQHRV
KNRIWQTLLVLFPSFDQNFLNGIIDKIFHAGFTNNQASIKYFIEWIIILILHKCPQFLPK
FWDCFSYSEEKLKTSICTFLSVLSHLGIIVQNIPDKTPLLKQALLIALQWCLSHNFSVRL
YALVALKKVWDVCKALGVEEYNAWTTVIERSLSQAESMQGAGNAKKNWQRIQEHFFFATF
HPLEDYCLETIFYILPRLSGVIEEEWIAVGKFANFADIPSNTGSQWYFSRTPLSELSPGD
WSQQDIGSNMSEAASQSEWADVQKKIIPWRQEGLDADLGLEFQDRAARLGKSVSRLIVVA
SLINKPTNLGGLCRTCEVFGAAALVLGSLQCVGDKQFQHLSVSAEQWLPLVEVKPAQLID
YLQLKKTEGYTIIGVEQTARSSDLAQYCFPEKSLLLLGNEREGIPANLIQHLDVCVEIPQ
QGVIRSLNVHVSGALLIWEYTRQQLLRRADPS
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atggagtgggtgctcgcggaggcactgctcgcgcagagcggggacccccgggtccttctc
ggggctctgtgccgaggggaggcatcggcggagcgcgtggagacgctgcgtttcctcctg
cagcgtcttgaggacgcgggcgcggggcagggcgcgctcccggaggcggcgcgcgagctg
gccgcgggttacttggtgcccctgctgcacggccgccctggcggtcacgaccctggtccc
ccgcggtcccggcggcgcgtgctgcgggcggcgggcgcggcgctacggtcgtgcgcccgg
ctcgcaggttccccgccgttggcagccgcactggcagaggaggcgctgagggagctgcga
gctgggcgcccaccgggcgccgaagcggccctggagatactggcggctgtcgcgccctgc
ctgcggccccacgaggacggcgcgctgctggagcgcgtggcgcaggccgccgtggccctg
gcgctggacgccgaagggccgggtcgcgctgagggcgcggcggcgctggtgaccgcgctg
ggcaagggcggcggcgtggcgctgacggccgtttggggagcgctggcgtcctcagggaac
cgctctgagccaggccgtgtcgggcccgagctgcggctgctcagcgcgctggctgagaaa
ctgctgcccgaacccggcgcgtgcgacgcgggccccgacgcacggcgctgcggacgcttc
tggaggacggtgcaggcgggtctgggctgtgccgaggacgccctgacgcgcaagcgcgcg
cgctacctactgcagagggccgtggaggtgtctgcagagcggggcgtcggttgcacctgc
ggcccccaggaaggaactggcccaagtctgttttggtggtctaagaagaaaaaagacgag
cttctaaaattttgggaaaattatattttaattatggaaactctagaagggaatcagata
catgttataaagccagtcttaccaaagctaaacaatctgtttgaatatgcagtgtcagaa
gaaaatggctgttggctctttcacccctcctggcatctgtgtatttataaaagaatgttt
gaaagtgaaaataaaatcctgaccaaagaaggcatcattcattttttggagctgtatgaa
acagtggctcttccattctcactggaattttctgagtttattattggaccattaatggat
gcactttcagagagctcattgtatagcaggcccacaggccagcttgtaggaagtggttct
ccattgggattaaaattacagaagtttttagtcacttatgtttctctccttccagaagaa
ataaagagtaatttcctattaaagtttcttcagaagatgaggagtagacattggtgtgct
gttcccattttgttcctgtctaaggcattggcaaatatcccaagatgtaaagccctgggt
ctagaagggcttcttgctctcagggatgtcatccagtgtactatgattacacatcacatt
ctattgagaggagcagcacagtgcttcctgcttcaaacagcgatgcatttggtggatgtg
gagaaagtatcactgtctgatgtctccagttttctcatctctctgaaacaagaagaatct
ttaggacgaggaaccaccttgtggacagagctctgtgactggctgtgtgtcaatgagagg
tctttcaggccatcctctatctgtggccctgatggacttcctgaaacatctctgaacgct
tatgtgaagaacctggtccaagagtacattacatcacctgcttgggaaacaggagaaagc
tgttttatgcctgactggtctgaggccaggctgactgctctgatgatcttgctagctgtg
gatgtggaaggaatgaagattgagtacagtgaaaagcggagaacacagaatgtgttgagg
atattcttagacccccttctggatgccctggtgaagctgggtaccaatgcctacgtgcct
ttgctgaggactgacagaagcctgcagttgctggtgaaattgttgcacacttgcatgttg
aaaggttccagcccccaagatgatgaggtgtctgcttttctccagagctccatcatgtct
gccaccgagagtatttctcagtttgtcctcagaagactaaccatgcgtgagcttcagaaa
gttgcagatctggatcgttgccatttatacctcatgctgttaactgagctcacaaacctc
catctgaaggcagggtggaaaagggcctactccatcttcagagtactttctcctttgaaa
aatgcatctatgcggcatcttcaagagatggaaagtggaaaggagctgagtcttggtgat
cagatccagaaggtggtcagtatggctactttggccacagtctgcgaggccagtaccctg
cagccggtgccagagctggattcccttgatgctgagcccatggacaggttcctatctgct
tttccatttaatcagacgctgcagaagccccgtgcagaggagcagggccagtgtgctcac
cccatggagagcagcagtttctttgaagagtcatcctcccaaggatgggggagagtggtt
gcacagtacatccatgatcagtgggtctgcctctccttcctgttggaaaaataccacacc
ctggttccggccacagatggcaccattccagagcccttgctgcctgccatccagatgcct
gctcagactctgcggtctgcactggacaccctctccatcctcccttctgagcaggtgctg
cctgtgttccgttgcatgaaggtgctggttcccaagctcctgacatctgctgaatcactc
tgcatagagtcttttgacatggcctggaaaatcatatcttctttaagcaacactcagctg
acattctggcctaatctaaagggttttgttcagtttgtttttgataacagagttctcacc
attgctgccaaaatcaagagccaggcatatttcaaaataaaagagattatgtacaagata
atcgaaatgtctgccataagaactggaatcttcaatatactgatcagttactgctgccaa
tcttggatagtgtctgactccaagcgatctttgttcagtgccaaaaattacagtgaactt
gtcctggaggcttgtatatttggaactgtgtttagacgtgatcagagacttattcaggat
gtacaaaccttcatagaaaatcttggacaggactgtgcagcaaatgttgttatggaaaat
actaaaagagaagactattatgtgagaatctgtgctgtcaaattcttgtgtttattagat
ggctcaaacgcatcccacaagttgttcatagaagatattgcaatgaagctattggataaa
gatgagttggtgtctaagactagaactcggtactacgagaattctctccagcatcgtgtg
aagaaccggatatggcagactctgctcgtactttttcccagctttgatcagaatttcttg
aatggaattattgacaagattttccatgctggtttcactaacaatcaagcttccataaaa
tattttatagaatggattattatattaattcttcataaatgccctcaatttcttccaaag
ttctgggattgcttttcttatagtgaagaaaaacttaagacaagcatttgtacatttcta
tcagttttgtcccatttgggcatcattgttcaaaatattccagataaaacaccgcttctg
aagcaggccctcctcatcgcgctgcagtggtgtctcagccacaacttcagtgttcgactg
tatgctcttgtggctctcaagaaagtctgggacgtgtgcaaagcactaggtgttgaagag
tataatgcatggaccactgtcatcgagcgcagtctcagccaagcggagagcatgcaggga
gcagggaatgccaagaagaactggcaacgcatccaagagcatttcttttttgcaacattt
catccactggaggattactgtctggagaccatattttacatccttccacggctttcaggt
gtcattgaagaggagtggatcgctgttggtaaatttgccaacttcgcagacatcccttcc
aacacaggatcccagtggtacttctctcggactccacttagtgagctcagtccaggggac
tggtctcagcaggacataggttctaacatgagtgaagcagccagccaatcagagtgggct
gacgtccagaaaaagatcatcccttggagacaagagggtctcgatgcagacctggggctc
gagtttcaggatcgcgccgccagactcggaaagtcagttagcagactgattgtggtggcc
tcactcatcaataagccaaccaatttaggaggtctgtgccggacctgcgaggtctttggg
gccgcggcgctggtcctgggcagtctgcagtgtgtcggtgacaagcagtttcagcacctc
agcgtctctgcagaacagtggcttcctctggtggaagtgaaaccagctcagctaattgat
tacctgcagctgaagaaaacagaaggttacaccatcattggggtggagcagacggccaga
agctccgacctggcccagtactgctttcctgagaagtcgctcctcctgctgggcaatgaa
cgtgaaggaatcccggcaaacctgatacagcatttggatgtgtgcgtggagatcccacag
cagggcgtcatccgctcgctgaatgtgcatgtgagcggagccctgctcatctgggagtac
actaggcagcagctgctcaggcgcgcagacccatcctga
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integrated database retrieval system
