Heterocephalus glaber (naked mole-rat): 101702113
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Entry
101702113 CDS
T02812
Symbol
Wdr33
Name
(RefSeq) WD repeat domain 33
KO
K15542
polyadenylation factor subunit 2
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101702113 (Wdr33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hgl03019
]
101702113 (Wdr33)
Messenger RNA biogenesis [BR:
hgl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101702113 (Wdr33)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Collagen
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_IFT122_1st
eIF2A
WD40_RFWD3
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
101702113
NCBI-ProteinID:
XP_004836028
UniProt:
A0AAX6NSJ9
LinkDB
All DBs
Position
Un
AA seq
1335 aa
AA seq
DB search
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESNEIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAE
IEQEMATLQYTNPQLLEQLKIERLAQKQAEQIQPPSSSGTPLLGPQPFPGQGPMSQLPQG
FQQPHPSQQMPMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGPQGFMGPQGPQGP
PQGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQGSSGPQGHMGPQGPPGPQGHIGPQG
PPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHPHGIQGGPGSQGIQGPVSQGPLMGLNP
RGMQGPPGPRENQGPAPQGMMMGHPTQEMRGPHPPSGLLGHGPQEMRGPQEIRGMQGPPP
QGSMLGPSQELRGPPGSQGQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPIP
FQQQKTPLLGDGPRAPFNQEGQSSGPPPLIPGLGQQGAQGRIPPLNPGQGPGPNKGDSRG
PPNHHLGPMSERRHEQTGGPEHGPERGPFRGGQDCRGPPDRRGPHPDFPDDFNRPDDFHP
DKRFGHRLREFEGRGGPLPQEEKWRRGGPGPPFPPDHREFSEGDGRGSARGPPGAWEGRR
PGDERFPRDSEDPRFRGRREESFRRGAPPRHEGRAPPRGRDGFPGPEDFGPEESFDASDE
AARGRDLRGRGRGTPRGGRKGLLPTPDEFPRFEGGRKPDSWDGNREPGPGHEHFRDAPRP
DHPPHDGHSPASRERSSSLQGMDMASLPPRKRPWHDGPGTSEHREMEAPGGPSEDRGSKG
RGGPGPSQRVPKAGRSSSLDGEHHDGYHRDEPFGGPPGSGTTSRGGRSGSNWGRGSNMNS
GPPRRGTSRGGGRGR
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atggccacagaaatcggttcacctcctcgatttttccatatgccaaggttccaacaccaa
gcgcctcgacagttgttttataagcgacctgattttgcacagcagcaagcaatgcagcag
cttacctttgatggaaaacggatgagaaaagctgtaaaccggaagactatagattacaat
ccgtctgtaattaagtatttggagaataggatatggcaaagagaccagagagatatgcgg
gcaattcagcctgatgcaggttattataatgatttggtcccacctataggaatgttgaat
aatcctatgaatgcagtaaccacaaaatttgttcggacatcaacaaataaagtaaagtgt
ccagtatttgtggtgaggtggactccagagggaagacggttagtcactggagcttctagt
ggagagttcaccttgtggaatggactcactttcaattttgaaacaatattacaggctcac
gatagcccagtgagggccatgacttggtcacataatgacatgtggatgttgacagcagac
cacggaggatatgtgaaatactggcagtccaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgatgacggcactgttagaatctgggactttcttcgttgccatgaggaaaggattctc
cgagggcatggtgctgatgtgaaatgtgtagactggcatccaaccaaagggttagttgtt
tcgggaagtaaagatagtcaacagccaatcaagttctgggatcccaagactgggcagagt
cttgcaacacttcatgctcataaaaacacagtcatggaagtaaaattaaacctcaatggc
aattggctgctcacagcatcacgtgaccatctctgtaagctttttgacatccgaaacctg
aaagaagagcttcaagtgttccgaggtcataagaaagaagccacagctgtggcctggcat
cccgttcatgaaggactgtttgccagtggaggatctgatggttctttgttattctggcat
gttggggttgagaaggaagtgggtgggatggagatggcccatgaaggaatgatctggagt
ttggcttggcatcctcttggacatattctctgctcaggttcaaatgaccataccagcaaa
ttctggactcgaaaccgaccaggtgataaaatgcgagatcgatataatctaaacctatta
cctggaatgtctgaagatggagtagaatatgatgaccttgaacctaatagcctggcagta
attccagggatggggataccagaacaactaaaactagctatggaacaagagcagatgggg
aaagatgaatcaaatgaaattgaaatgacaataccaggtttagactggggaatggaggag
gtgatgcaaaaagatcagaaaaaagtacctcagaaaaaagtcccttatgcgaaacctatt
cctgcccagttccagcaggcctggatgcaaaacaaagttccaattcctgctccaaatgag
gtactgaatgacagaaaagaggacattaaattggaagagaagaaaaaaacccaagcagaa
attgagcaagaaatggccacgttgcagtacacaaacccacagctcctggagcaacttaaa
attgaaagacttgcgcagaaacaggctgagcagattcagcctccttcctcatctggcacc
cctctccttggacctcagccctttccaggacaaggtccaatgtctcagcttcctcaaggt
tttcaacagccccatccatctcagcagatgccaatgaatatggctcagatggggccccct
ggtccacagggacagttcagacctcctgggcctcagggacaaatgggaccacaaggtcct
ccattgcatcagggaggtgggccacaaggattcatgggaccacaagggccacagggccca
cctcaggggctgccacggcctcaggacatgcatgggccccaaggaatgcagaggcatcct
ggacctcatggtcctttgggacctcaaggaccacctggaccacaaggcagttctggtcct
caaggtcatatgggtcctcagggtccacctggtccacagggtcacataggcccccagggc
ccacctggtcctcagggccacttgggcccacaggggcctcctggaactcaaggtatgcag
ggaccacctggtcccagaggaatgcaaggaccccctcatcctcatgggatccaaggtggg
ccaggctctcaagggatccaaggtcctgtgtctcagggacctctgatgggattgaatcca
agaggaatgcagggacctccaggtccccgggagaatcagggtcctgctccccaagggatg
atgatgggccacccgactcaagaaatgagaggacctcaccctccaagtggactgctggga
catggccctcaggaaatgcgtggtcctcaggagattcgaggcatgcaggggcctccaccc
caaggatcaatgctgggcccttcccaggaactgcgagggcctccaggctcacaaggtcag
caggggccgccccagggatctttgggacctccaccccagggaggcatgcaaggcccccct
ggacctcagggacagcagaacccggcgagagggccacatccatctcaagggccaatacca
ttccagcagcagaaaacacctctgctaggtgatgggccccgggcccccttcaatcaggaa
ggacagagttccggccccccacccctgattccgggcctagggcagcagggagcacaaggc
cgaatccctcctctaaatcctggacaaggacctggccccaacaaaggtgactcccgcggc
cctcccaaccatcacctgggtccaatgtcagagaggcgacatgagcagaccggtggccct
gagcacgggcccgagaggggtcctttccggggtggtcaagactgcaggggtccccctgac
aggcggggccctcatccagactttcctgatgacttcaacagaccagacgacttccaccct
gacaagcgctttggccaccggttacgtgaatttgaaggacgaggaggacctttgccacaa
gaagagaagtggaggcgaggaggccctggacctccatttcctcctgatcacagggaattc
agtgagggtgatggccggggttctgcccgtggccctccaggggcatgggaaggccgaaga
cctggagatgaacgatttccccgggactctgaggacccacgtttccgagggcgcagagaa
gaaagcttcagaagaggagcccccccaaggcatgagggccgtgctccccccagaggaagg
gacggctttcctggtcctgaagactttggcccagaggagagttttgatgcttctgatgaa
gcagcccgaggtcgagatctcagaggtcgaggtcggggcaccccaagaggaggaaggaag
ggtttacttcccactcctgatgagttccctcgcttcgaaggagggcggaagccagactcc
tgggatggaaaccgtgagccagggccaggtcatgaacatttccgcgatgctcctcgccct
gatcatccccctcatgatggtcattccccagccagcagagagcgctcttcttctctccag
ggcatggacatggcatctctaccacctcgaaagcgcccctggcatgatgggccaggcact
tctgagcacagagagatggaggcccctgggggcccttccgaggatcgaggaagcaaaggc
cgagggggcccaggaccatcccagagagtgccaaaagctggccgttccagctccttggat
ggagaacaccacgatggataccacagagatgaaccttttgggggccctccaggcagtggc
accacttctcgagggggccggagtggcagtaactggggtagagggagtaacatgaactct
ggtcccccaaggcgaggcacttcaaggggtggtggacgcggtcggtag
DBGET
integrated database retrieval system