Heterocephalus glaber (naked mole-rat): 101702722
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Entry
101702722 CDS
T02812
Symbol
Edc4
Name
(RefSeq) enhancer of mRNA decapping 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101702722 (Edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hgl03019
]
101702722 (Edc4)
Messenger RNA biogenesis [BR:
hgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101702722 (Edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
101702722 (Edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
Beta-prop_EDC4L
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_HPS5
WDR55
EIF3I
Motif
Other DBs
NCBI-GeneID:
101702722
NCBI-ProteinID:
XP_004843060
UniProt:
A0AAX6P3U8
LinkDB
All DBs
Position
Un
AA seq
1410 aa
AA seq
DB search
MASCASIDIEDATQHLRDILKLDRPAAGSSVESRRQSSAYNGDLNGLLVPDPLCSGDGTS
ANKPSLRTMPPINLQEKQVICLPGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVKI
QPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERILLKGFTGSVA
DLAFAHLNSPQLACLDEAGNLFVWRLALVNGKIQEEILVHIRQPEGTTLNHFRRIIWCPF
IPEESEDCCEESSPTVALLHEDRAEVWDLDMLRSNHSTWPVDASQIKQGFIVVKGHSTCL
SEGALSPDGTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQ
DPEVPFWRFLITGADQNQELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAEY
LILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRDTEVLPA
EEENDSLGPEGSHGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPTHTA
HEDFAFGESRPELGSEGLGSTTHGSQPDLRRIVELPVPADFLSLSSETKPKLMTPDAFMT
PTASLQQITASPSSSSSSSNSSSSSSSNSSSSSSSSSLTAVSAVSSTSAVDPPLPRPPED
LTLSPKLQLDGGLTMSSSSSSLQGSPRSLLPSLLPGPADKLTSKGSGQVSTTASALSLEL
QEVEPLGLPQASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSAPEGLEPDSMAS
AASALHLLSPRPRPGPELGPQLGLDGGPGDGDRHSTPSLLEAALTQEAATSDSQVWPTAP
DITRETCSTLAESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDTSAEQSDHDDEVASLASA
SAGFGTKIPTPRLPAKDWKTKGSPRTSPKLKRKSKKDDGDSAVGSRLTEHKVAEVPEDWP
ALIWQQQRELAELRHSQEELLQRLCTQLEGLQSTVTGHVERALETRHEQEQRRLERALAE
GQQRGGQLQEQLTQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLNNSVA
TKLTAVEGSMKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQ
AMFQQINDSFRLGTQEYLQQLESHMKSRKVREQEAREPVLAQLRGLVSTLQSATEQMAAT
VSSSVRAEVQHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAG
TPVPSSHLDCHTQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPAQVFGQPPC
PLSQPVLLSLIQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMGQVRQKLFQ
FLQAEPHNSLGKAARRLSLILHGLVTPSLP
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctgcgggacatcctc
aagctggaccggcccgcggcgggctccagtgttgagagccggcggcaatccagtgcctat
aatggggatctcaatgggctcctggtcccagacccactctgctcaggtgatggtacctca
gcaaacaagcctagtcttcggaccatgccaccaattaacctacaggagaagcaggtcatc
tgcctccctggagatgacagctctacctgcattggtattttggccaaggaggtggagatt
gtggccagcagtgactccagcatttcaagcaaggctcgggggagcaacaaggtgaaaatc
cagcctgttgccaagtatgactgggagcagaagtactactatggcaacctgattgctgtg
tctaattccttcttggcctatgccattcgagctgccaataatggctcagcgatggtgcga
gtgattagtgtcagcacttcggaacggattctgctcaagggcttcacaggcagtgtggct
gatctggcctttgcacacctcaactctccacagctggcctgcctggatgaggcaggcaac
ctgtttgtgtggcgcttggctctggttaatggcaaaattcaagaagaaatcttagtccat
atccggcagccagagggcacaacactaaaccacttccgaaggatcatttggtgccccttc
attcctgaggaaagtgaggactgctgtgaggaaagcagcccaacggtggccctgctgcat
gaagaccgggctgaggtgtgggacctggatatgctccgttctaaccacagcacctggcct
gtggatgccagccaaatcaagcagggcttcattgtggtaaaaggccacagcacgtgccta
agtgaaggagccctctcccccgatgggactgtcctggctactgcgagtcatgatggctat
gtcaagttctggcagatctacattgagggacaggatgaaccaaggtgtctccatgagtgg
aaacctcatgatggaaggcccctctcctgcctcctgttctgtgacaaccataagaaacag
gaccctgaagtccctttctggaggttcctcattactggtgctgaccagaatcaggagctg
aagatgtggtgcacagtatcctggacctgcctgcagaccattcgcttttccccagatatc
ttcagctcagtgagtgtgccccccagcctcaaagtttgcttggatctctcagcagaatac
ctcattctcagcgatgtacaacggaaggtcctctatgtgatggagctgctacagaaccag
gaggaaggccgtgcctgcttcagctccatctcagagttcctgctcacccatcctgtgtta
agctttggcatccaggttgtaagtcgctgccggctgcgggacactgaggtgctgcctgct
gaggaggagaatgacagcctggggcctgagggctcccatggagctggtgccatggagtct
gcagctggtgtgctcatcaagctcttctgtgtacatactaaggcactgcaagatgttcag
atccgcttccagccacagttgaaccctgatgtggtggccccactccccactcacactgcc
catgaggactttgcctttggagagtctcggcctgaactaggatctgagggcctggggtca
accactcatggctctcagcctgacctccgacgaattgtggagctgcctgtacccgctgac
ttcctgagcctgagcagtgagaccaagcccaagttgatgacccctgatgccttcatgaca
cccactgcctctctgcagcagatcactgcatctcctagcagcagcagcagtagcagcaac
agcagcagcagcagcagcagcaacagcagcagcagcagcagcagcagctctcttacagct
gtgtctgccgtgagcagcacctcagctgtggacccccctttgcccagaccacctgaggat
ctgaccttgagcccaaagctgcagctggatggaggtctgacaatgagcagcagcagcagc
agcttgcagggaagcccacgcagcctcctgcctagcttgctcccaggtccagctgacaaa
ttgacttctaaggggtctggacaggtatctactactgcctctgcactgtccctggagctg
caggaagtggagcccctggggctccctcaggcctcccccagtcgcactcgctcccctgat
gttatctcctcggcttccactgccctgtcccaggatatccctgagattgcatctgaggcc
ttgtcccgtggctttggttcctctgctcctgagggccttgagccagacagtatggcttca
gctgcctcggcactacacctgttgtctccacggccccggccagggcccgagcttggccct
cagcttggcctggatggcggccctggggatggggatcggcatagtacgccctccctcctg
gaggcagccttgacccaggaggctgcaacctctgatagtcaggtctggcctacagcacct
gacattactcgtgagacctgtagcaccctggcagagagccccaggaatggccttcaggaa
aaacacaaaagcttggctttccaccgaccaccttaccatctgctgcagcaacatgacagc
caggacaccagtgctgagcaaagtgaccatgatgatgaggtggccagccttgcctctgcc
tcagcaggctttggaaccaaaattcccactccccggctgcctgctaaggactggaagacc
aagggatctcctcgtacctcacccaagctcaaaaggaaaagcaagaaggatgatggggat
tcagctgtaggatcccggctcacagagcacaaggtggcagaggtccctgaggactggcca
gcactaatttggcagcagcagagagagctggcagagctacgccacagccaagaagagcta
ctacagcgtttgtgtacccaacttgaaggcctgcagagtactgttacaggccatgtagaa
cgtgctcttgagacacggcatgagcaggaacagaggcggctggagcgggcactggctgag
gggcagcagcggggtgggcagctacaggagcagctgacacagcagctatcccaggcactg
tcttcagctgtagctgggcggctggagcgtagcatacgggatgagatcaagaagaccgtt
cctccatgtgtctccaggagtctggagcccgtggctggccaattgaacaattcagtggct
accaagctcacagccgtggaaggtagtatgaaagagaacatctccaagctgctcaagtcc
aagaacttgacagatgccattgcccgagctgctgcagacacattacaggggccaatgcaa
gctgcctaccgtgaagcctttcagagtgtggtgctgccagcctttgagaagagctgtcaa
gccatgttccagcagatcaatgatagctttcggctgggcacccaggaatacttacagcag
ctagagagccacatgaaaagccggaaggtacgggaacaggaggccagggagcctgtgctg
gcccagcttcggggcctggtcagcacactgcagagtgccacagagcagatggcagccact
gtgtccagcagtgttcgggctgaggtgcagcaccagctgcacgtagctgtgggcagcctg
caggagtcaattttagcacaggtacagcgcattgttaagggtgaagtaagtgtggcgctc
aaggagcagcaggctgccgtcacctccagcattatgcaggccatgcgctcagctgctggc
acacctgtcccttcttcccaccttgactgccacacccagcaagctcatatcctgcagctg
ctacaacagggccacctcaatcaggccttccagcaggcactgacagctgctgacctgaac
ctggtgctgtatgtgtgtgaaactgtggacccagcccaggtttttgggcagccaccctgc
ccactctcccagcctgtgctcctttccctcatccagcagctggcatctgatcttgggact
agaactgacctcaagctcagctatctggaagaggctgtgatgcacctggaccacagcgac
cccatcactcgagaccatatgggctcagtcatgggccaggttcgacagaaactcttccag
ttcctgcaggctgagccacacaactcacttggcaaagcagcccggcgtctcagcctgata
ctacatggccttgtgacccccagcctcccttag
DBGET
integrated database retrieval system