Heterocephalus glaber (naked mole-rat): 101704043
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Entry
101704043 CDS
T02812
Symbol
Dhx8
Name
(RefSeq) DEAH-box helicase 8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101704043 (Dhx8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hgl03041
]
101704043 (Dhx8)
Enzymes [BR:
hgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101704043 (Dhx8)
Spliceosome [BR:
hgl03041
]
Complex C
Other components
Step II factors
101704043 (Dhx8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
AAA_16
PhoH
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
101704043
NCBI-ProteinID:
XP_004859336
UniProt:
A0AAX6PUY4
LinkDB
All DBs
Position
Un
AA seq
1223 aa
AA seq
DB search
MAVALTPVGALGASEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLTEKN
TTFETFKASLVKNGAEFTDSLVSNLLRLIQTMRPPAKPSMSKDPVVKPKTEKEKLKELFP
GLCQPDNPAVRTMLDEDDVKVAVDVLTELEALMPSAMGQEKQRDMEQRDRMKKKKRSRSR
SRERERDRERVRERVREREHRRRHPAGSRPQSRAQERSKGKSRYRSRSRSQSPPKDRKDP
RDKDGERGLARWRDKHVDRPPPEEPALGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHI
SELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQESGEDLNPNRRRNLVGE
TSEETSMRNPDRPSHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFP
DFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAM
MQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGVMPSDIPE
WKKHAFGGNKASYGKKTQLSIVEQREGLPIYRLKGQLVQAVHDNQILIVIGETGSGKTTQ
ITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETV
IKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTS
ATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDIL
VFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVI
ATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPG
KCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITA
MEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNV
FYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQD
IRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHP
SSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQR
LEPLYNRYEEPNAWRISRAFRRR
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccctgacccctgtaggagcgcttggggcttcggagccgggccccgcggag
gagctcgccaaactcgagtatctgtccttggtgtccaaggtttgcaccgagctggacaac
cacttagggatcaacgacaaggatctagctgaatttgtgataagtctcactgagaagaat
accacctttgagacttttaaggcttccctagtcaaaaatggtgcagaattcacggattcc
ctggtcagcaacctgctgcgtctcatccagaccatgcggcccccggcaaagccatccatg
agcaaagaccccgttgttaagcccaagaccgagaaggagaagctgaaggagctgttcccg
gggctctgccagcctgacaacccagctgtccggaccatgctggacgaggacgatgtgaag
gtcgctgtggacgtcctcacagagctggaggccctgatgcccagcgccatgggccaggag
aagcagagagacatggagcaacgggacaggatgaagaagaaaaagcggagccggagccgg
agccgggagcgggagcgggacagagagcgagtcagagagcgagtccgagagcgagagcac
aggcgcagacacccggctggctcgcggccccagtcccgggcccaggagcggagcaaaggg
aagtccagataccggtcgaggagcaggagccagagcccccccaaggaccggaaggacccc
cgggacaaggacggggagaggggcctggccaggtggcgggacaagcacgtggatcgccca
ccgcctgaggagccggccctgggcgacatctacaatggcaaggtcaccagcatcatgcag
ttcgggtgcttcgtgcagctggaggggctgaggaagcggtgggaaggcctggtgcacatc
tccgagctgcggcgcgagggccgcgtggcaaacgtggcggacgtggtgagcaaaggccag
cgggtgaaggtcaaagtgctgtccttcaccgggaccaagaccagcctgagcatgaaggac
gtggatcaggagagcggagaggacctgaacccaaatcggcggcggaacctggtgggggag
accagcgaggagacctccatgcggaacccggacaggcccagccacctgtcgctcgtcagc
gcccctgaggtggaggacgactcgctggagcggaagcgcctcacgcgcatctcggacccc
gagaagtgggagatcaagcagatgattgcggccaatgtcctctccaaagaggagtttcca
gacttcgacgaggagactggcatcctcccgaaggtggacgacgaggaagatgaggacctg
gagatcgagctggtagaggaggagcccccgttcctgcggggccacacaaagcagagcatg
gacatgagtcccatcaagatcgtcaagaacccggatggctccctgtcccaggccgccatg
atgcagagcgcgctggccaaggagcggcgggagctgaagcaggcgcagcgggaggccgag
atggactccatccccatgggcctcaacaagcactgggtcgaccccctgcctgatgccgag
ggcaggcagattgcggccaacatgcgggggatcggggtgatgcccagcgacatccccgag
tggaagaagcacgcgtttgggggcaacaaggcatcttatggcaagaagacgcagctgtct
attgtggagcagcgggaggggctgcccatctacaggctcaaggggcagctggtgcaggcc
gtccacgacaaccagatcctcatcgtcattggcgagaccgggtccgggaagaccacgcag
atcacccagtacctggccgaggccggctacacgtcccggggcaagatcggctgcacccag
ccccggcgcgtggctgccatgtccgtggccaagcgggtgtccgaggagttcggctgctgc
ctggggcaggaggtgggctacaccatccggttcgaggactgtaccagccccgagaccgtc
atcaagtacatgacggatggcatgctgctgcgcgagtgcctgatcgaccccgacctgacg
cagtatgccatcatcatgctggacgaggcgcacgaacggacgatccacactgacgtgctc
ttcgggctgctgaagaagacggtgcagaagcggcaggacatgaagctgatcgtcacctcg
gccacgctggatgcggtgaagttctcccagtacttctacgaggcccccatcttcaccatc
ccgggccgcacctaccccgtggagatcctgtacaccaaggagcccgagaccgactacctg
gatgccagcctgatcaccgtcatgcagatccacctcaccgagccgccaggtgacatcctg
gtcttcctgaccgggcaggaggagatcgacacggcctgcgagatcctgtacgagaggatg
aagtcgctgggccctgacgtccccgagctgatcatcctgcccgtgtactctgccctgccc
agcgagatgcagacccgcatcttcgacccggcccccccaggcagcaggaaggtcgtgatt
gccaccaacatcgcggagacctcgctgaccatcgacggcatctactacgtggtggacccc
ggcttcgtgaagcagaaggtctacaactccaagactggcatcgaccagctggtggtgacg
cccatctcccaggcccaggcaaagcagcgcgcgggcagggcgggtcgcacaggccccggg
aagtgctaccggctgtacacggagcgcgcctaccgtgacgagatgctgaccaccaacgtg
cccgagatccagaggaccaacctggccagcaccgtgctgtccctcaaggccatgggcatc
aacgacctgctgtccttcgacttcatggacgcccccccgatggagaccctcatcacggcc
atggagcagctctacacactgggggccctggacgatgaggggctgctcacccgcctgggc
cgcaggatggcagagttcccactcgagccgatgctgtgcaagatgctcatcatgtcggtg
cacctgggctgcagcgaggagatgctgaccatcgtgtccatgctgtctgtgcagaacgtc
ttctacaggcccaaggacaaacaagccctcgctgaccagaagaaagccaagttccaccag
acggagggcgaccacctcacgctgctggccgtgtacaactcctggaagaacaacaagttc
tccaacccctggtgctacgagaacttcatccaggcccgctccctgcgccgggcgcaggac
atccggaagcagatgctgggcatcatggacaggcacaagctggacgtggtgtcatgcggc
aagtccacagtgcgcgtgcaaaaggccatctgcagtggcttcttccgcaacgcagccaag
aaggacccgcaggagggctaccgaacgctcatcgaccagcaggtggtctacatccacccc
tccagcgccctcttcaaccggcagcctgagtgggtggtgtaccacgagctggtgctgacc
acgaaggagtacatgagggaggtcaccaccattgacccgcgctggctggtggagttcgcg
cccgccttcttcaaggtctctgaccccaccaagctcagcaagcagaagaagcagcagcgc
ctggagcccctgtacaaccgctatgaggagcccaacgcctggaggatctctcgagccttc
cggcggcgctga
DBGET
integrated database retrieval system
