Heterocephalus glaber (naked mole-rat): 101704168
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Entry
101704168 CDS
T02812
Symbol
Smarcd1
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03082
ATP-dependent chromatin remodeling
hgl04714
Thermogenesis
hgl05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101704168 (Smarcd1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101704168 (Smarcd1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101704168 (Smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hgl03021
]
101704168 (Smarcd1)
03036 Chromosome and associated proteins [BR:
hgl03036
]
101704168 (Smarcd1)
Transcription machinery [BR:
hgl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101704168 (Smarcd1)
Chromosome and associated proteins [BR:
hgl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101704168 (Smarcd1)
PBAF complex
101704168 (Smarcd1)
GBAF(ncBAF) complex
101704168 (Smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
101704168
NCBI-ProteinID:
XP_004863055
UniProt:
A0AAX6Q1B0
LinkDB
All DBs
Position
Un
AA seq
584 aa
AA seq
DB search
MVFSPGPPRREGVVSTPFPLVAPSSPQSRCPEHPELAERTNRPALGGRTGGGGSSGSGSL
CSCSGGSGKMAARAGFQSVAPSGGAGASGGAGAATALGPGGTPGPPVRMGPAPGQGLYRS
PMPGAAYPRPGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQV
QQQAVQNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEA
LKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKR
KFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQ
PPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQR
MKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLST
ASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVG
NPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggttttctctccaggaccgccaaggcgggagggagtggtcagcacgccttttccgcta
gttgccccctctagcccacagtctcgctgccctgagcatcccgagctggccgagcgcaca
aacaggccggcgcttggggggcgtacagggggcggggggagttccggttccggttctttg
tgcagctgcagcggcggctccgggaagatggcggcccgggcgggtttccagtccgtggcc
ccgagcggcggcgccggagcctcaggaggggcgggcgcggcaactgccctgggcccaggc
ggaactcccggacctcctgtgagaatgggcccggcgccgggtcaagggctgtaccgctcc
cctatgcccggagcggcctatccgagaccaggtatgctgccaggcagccgaatgacacct
cagggaccttccatgggacctcctggctatggggggaacccttcagtccgacctggcctg
gcccagtcagggatggaccagtcccgcaagagacctgcgcctcagcagatccagcaggtc
cagcagcaggcggtccaaaatcgaaaccacaatgcaaagaaaaagaagatggctgacaaa
attctacctcaaaggattcgtgaactggtaccagaatcccaggcctatatggacctcttg
gcttttgaaaggaaactggaccagactatcatgaggaaacgtctagatatccaagaggcc
ttgaaacgacccatcaagcaaaaacggaagctgcgaattttcatttctaacactttcaat
ccggctaaatccgatgccgaggatggggaagggacggtggcatcctgggagcttcgggta
gaaggacggctcctggaggattcagccttgtccaaatatgatgccaccaaacaaaagagg
aaattctcttccttttttaagtccttggtgattgaattggacaaagacctgtatggacca
gacaaccatctggtagaatggcacaggaccgccactacacaggagactgatggcttccag
gtgaaacggccaggagatgtgaatgtacggtgtactgtcctactgatgctggattaccag
cctccccagtttaaattagaccctcgcctggctcggctcctgggtatccatacccagact
cgtccagtgattatccaagcactgtggcaatatattaagacacataaactccaggaccct
catgagcgggagtttgtcatctgtgataagtacctccagcagatctttgagtctcaacgt
atgaagttttcagagatccctcaaaggctccatgctttgcttatgccaccagaacccatt
atcattaatcatgtcatcagtgttgacccaaatgaccagaaaaagacagcttgttatgac
attgatgtggaagtggatgataccctgaagacccagatgaattcttttctgctgtctact
gctagccagcaggagatcgctactttagacaacaagatccacgagacaatagaaactatc
aaccagctgaagacccagcgggagttcatgctgagcttcgccagagaccctcagggcttc
atcaatgactggcttcagtctcagtgccgggacctcaagaccatgaccgatgtggtgggt
aacccagaggaggagcgccgagctgaattctacttccagccttgggctcaggaggctgtg
tgccgatacttctactccaaggtgcagcagagacgacaagaattagagcaagctctggga
atccggaatacatag
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