Heterocephalus glaber (naked mole-rat): 101704694
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Entry
101704694 CDS
T02812
Symbol
Snrnp40
Name
(RefSeq) small nuclear ribonucleoprotein U5 subunit 40
KO
K12857
Prp8 binding protein
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101704694 (Snrnp40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hgl03041
]
101704694 (Snrnp40)
Spliceosome [BR:
hgl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
101704694 (Snrnp40)
Complex C
U5 SnRNP specific factors
101704694 (Snrnp40)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Ge1_WD40
Cytochrom_D1
PROPPIN
Motif
Other DBs
NCBI-GeneID:
101704694
NCBI-ProteinID:
XP_012929650
LinkDB
All DBs
Position
Un
AA seq
332 aa
AA seq
DB search
MIEQQKRKAPELPLVPVKRQRHELLLAAAGSGPGAGQQQATPGALLQAGPPRCSSLQAPI
MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNT
DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW
DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKMTKVRSQEVWIYFAVRVWDVR
PFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPG
HAGSINEVAFHPDEPIILSASSDKRLYMGEIQ
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgatagaacagcagaagcgcaaggccccggagttgccactggttccagtcaagcggcag
cgacatgagttgctcctggcagcggcggggtcaggccccggagcagggcagcagcaggcg
accccgggagctttacttcaagcgggacctccaaggtgttcctcccttcaagccccaatc
atgctactctcaggacatgaaggagaagtgtactgctgcaagtttcaccccaatggctcc
accttggcatctgcaggatttgaccgattgatactgctgtggaatgtctatggtgactgt
gataattatgccacactgaaaggacatagtggagcagtgatggagctccattataacaca
gatggcagtatgctcttctccgcatccacagataaaactgtggcagtatgggatagtgaa
acaggcgaaagggttaaaaggctgaagggacatacttcctttgtaaattcctgttaccca
gccaggaggggaccccagcttgtctgcactggcagcgatgatggtacagttaagctttgg
gacatccggaagaaagcagctatccagacgtttcaaaacacataccaggtattagctgtg
acctttaatgacacaagtgatcagattatctctggtggaatagacaatgatataaagatg
actaaggtaaggtcccaagaggtttggatttattttgcagtgcgtgtctgggatgtccgt
ccatttgcccctaaagagaggtgtgtaaagatatttcaaggaaatgtgcataactttgaa
aagaatctcctgagatgttcttggtcacctgatgggagcaaaatagcagctggctcagcg
gacaggtttgtgtatgtgtgggacaccacaagcaggagaatactgtataagctgcctggc
catgctggctccatcaatgaagtagctttccatcctgatgagcccatcattctctcagca
tctagtgacaagagactgtatatgggggagattcagtga
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