Heterocephalus glaber (naked mole-rat): 101705263
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Entry
101705263 CDS
T02812
Symbol
Pdcd11
Name
(RefSeq) programmed cell death 11
KO
K14792
rRNA biogenesis protein RRP5
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hgl03009
]
101705263 (Pdcd11)
Ribosome biogenesis [BR:
hgl03009
]
Eukaryotic type
90S particles
Other 90S particles
101705263 (Pdcd11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
Spt6_S1
HAT_PRP39_C
OB_RRP5_4th
HAT_Syf1_CNRKL1_C
OB_RRP5
TPR_14
Suf
TPR_19
ARM_TT21
ARM_TT21_5th
TPR_15
UTP6_C
TPR_CcmH_CycH
DUF2110
NRDE-2
TPR_16
DUF7017
PPR
TPR_12
TPR_2
Motif
Other DBs
NCBI-GeneID:
101705263
NCBI-ProteinID:
XP_012921564
UniProt:
A0AAX6RYP5
LinkDB
All DBs
Position
Un
AA seq
1869 aa
AA seq
DB search
MAALEENFPRGGTRKIHKSEKSYQQLVEHDNLFDISNEEESTKRKKNQKGPAKTKKLKIE
KREGGKSVKEKLEILSVESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICDAYT
KKLNEQVAQEEPLKDLLRLPELFSPGMLVRCVVSSVSITERGKKSVKLSLNPKNVNRVLS
AEALKPGMLLTGTVSSLEDHGYLVDIGVVGTRAFLPLQKAQEYIRQKNKGAKLKVGQYLN
CIIEEVKSSGGVASLSIEQSAISTAIATQEQNWSLNNLLPGLVVKAQVQKVTQFGLTLNF
LTFFTGLVDFMHLDSKKVGTYFSNQAVRACILCVHPRTRAVRLSLRPIFLQPGRPLTQLS
CQHLGAVMKDVPVQGFFNKAGATFKLKDGALAYARLSHLSDSKNAFRPETFKPGNMHKCR
ITDYSPMDGLALLSLRTSVIEAQYLRYHDIKTGAVVKGTVLTMRPFGMLVKVGEQVRGLV
PATHLADILMKNPEKKYQVGAEVKCRVLLCDPEAKQLIMTLKKTLVTSKLPVITCYEDAK
PGLQTHGVIHRAKDYGCIVRFYNDVQGLVPKHELGAQCIPDPEKAFYAGQVVKVAVLNCE
PAKERMLLSFKLLSDPEPKNERVGCGQKKRKDVGVGQLVDVKVLEKTKDGLQVAVLPHNI
PAFLPTPHLSDHVANGPLVHRWLQAGDTLHRVLCLSQSERQVLLCRKPALVSSVEAGQDP
KSFSEIQPGMLLVGFVKSIKDYGVFVQFPSGLSGLAPKAIMSDKFVTNPSDHFVEGQTVV
AKVTNVDEEKQRMLLSLRLSDCRLGGPASGSLLLLSQCLEELQGVRSLMSSRDSVLVQAL
AEMTPGMVLNLVVQEVSEDGSVVFTGAPVRDLVLRASRYHRAGQEVESGQKKKAVILYVD
MLGLEVHVSLRKELVNRKAWKLKKGSVHQATVQHLEESFAVASVGETGHLVAFSLASHLN
DTFRFDSEKLQVGQSVCLVLKTAEPGVTGLLLAVEGPAARRVLRQPCKDSEMGDEGEGAD
PALAAGPRKKHGLAIGDVVTGTVKSVKPTHVVVTLEDGVMGCVHASHVLDEVPEGAAPTA
TLKVGKTVTARVIGGRDVKTFKFLPISHPRFIRTVPELSVRPSELEKDGHTVLNTYSASP
VEKIQQYRAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFQI
GQALRATVVGPDSSKPFLCLSLIGPHKLKKGEVAMGRVVKVSPSEGLTVAFPFGRTGTVS
VFHVSDSYSERPLQDFSPQKVVRCYVLSTANHVLTLSLRLSRTNPETKSKVEDPEINSIL
DIKEGQLLRGFVRSVEPSGVLLGLGPSVEGLARFSHVSQCSLPKKGLYSKYLPEGRLLTA
RVLRLDPSKNLVELSFLPGDTGKPDVMSVSPELLVQKQEEDVEVKERDRKGEKKRSPKRK
EKKNQKGQEEGELPSKEQVRAKRPGKRERLGSEGAQESANKRRKKAGPPEEEDSGVEVYY
REGAEEEAAEAEVLPTGTLTKPAEVPRLRLSSGFFWDVGLDTLTPALPPRGENSDSEEDE
KPPHATQQKKSKKERELEKQKAEKELSRIEEALRDPGRQPESADDFDRLVLSSPSSSILW
LQYMAFHLQATEIDKARAVAERALRTISFREEQEKLNVWVALLNLENMYGSPESLSKVFE
RAVQYNEPLKVFLHLADIYAKSEKFQEAGELYNRMLKRFRQEKSVWIKYGAFLLRRGQAG
ASHRVLQRALECLPAKEHMDVITKFAQLEFQLGDAERARAIFENMLSTYPKRTDIWSVYI
DMTIKHGSQKEVRDIFERVIHLNLAPKKMKFFFKRYLDYEKQHGSEKDVRAVKAKALEYV
EARSSVLED
NT seq
5610 nt
NT seq
+upstream
nt +downstream
nt
atggcagccctagaagaaaactttccgcgagggggtacaagaaagatccacaagtcagag
aaatcttaccagcagttagttgaacatgacaacttatttgacatttccaatgaagaagaa
tccaccaaaaggaaaaagaaccagaaaggcccagcaaaaacaaaaaagttgaaaattgag
aagagagaagggggcaagtctgtaaaagagaagcttgaaatccttagcgttgagtcccta
tgtgaaggaatgcggattttgggttgtgtcaaagaggtaaatgagctggaactggtgatc
agtctccccaatggcctccaggggtttgtgcaagtgactgaaatctgtgatgcctacacc
aaaaagctgaatgagcaggtggctcaagaagaacctctgaaggacctactccgtttgcct
gaacttttctcacctggaatgctggtgagatgtgtggtaagcagtgtgagcatcacagag
agaggcaaaaagagtgtcaagctctctctgaaccccaaaaatgtgaacagagtgctgagt
gctgaggccctgaagcctggcatgctgctgacaggtaccgtgtccagcctggaagatcat
ggctacctagtggacattggtgttgtcgggaccagagcttttctgccgctgcagaaagcc
caggaatacatccgacagaagaacaaaggtgctaaattgaaagtgggtcaatacctgaac
tgcatcattgaggaggtgaaaagcagtggaggagttgctagcctgtccatagagcagtca
gcgatttctactgccattgctacccaggagcaaaactggagtcttaacaacttgcttcca
ggactagtggtcaaagcccaggtacagaaggtgactcagtttggccttaccctgaacttc
ctcacgttcttcaccggcctggtcgacttcatgcatctggattccaagaaagttggaaca
tatttctcaaaccaagcagtgagggcctgcatcctctgtgtgcatcctcggaccagagct
gtgcgcctgagcctgcgccccatcttcttgcagcctggacgcccactcacccagctctct
tgccagcaccttggagctgtgatgaaagatgtccctgtccagggctttttcaacaaggca
ggggccaccttcaagctgaaggacggggctctggcctatgcccggctcagccatctctct
gattctaagaatgccttcagacccgagactttcaagccagggaacatgcacaagtgcaga
attactgactacagcccgatggacgggctggccctgctctctctgcggacgtctgttatt
gaagctcagtaccttagatatcatgatatcaaaactggggcggtggtgaagggcacagtg
ctgaccatgaggccatttgggatgctggtgaaggtgggtgagcaagtgaggggtctggtg
cctgccacgcacctggccgacatcctgatgaagaacccagagaagaagtaccaggtcggc
gccgaggtcaagtgccgggttttactttgtgaccctgaagctaagcagctgatcatgacc
ctgaagaaaactctggttacatccaaactgcctgttattacttgctatgaagatgccaag
cctggtctgcagacccatggcgtcatccacagggccaaggactacggctgcatcgtgagg
ttctacaacgacgtgcagggactggtgcccaagcatgagcttggcgcccagtgtatccct
gacccggagaaggccttctacgctggccaggtggtgaaggttgctgtactgaactgtgag
ccagccaaagaaaggatgctcttatccttcaagctgttgagtgatccagagccaaagaat
gagcgtgtgggatgtggtcagaagaaaagaaaagatgttggtgttgggcagttggtggat
gtgaaggttttggagaagaccaaagatgggctgcaggtggctgtgctgccccacaacatc
cctgctttcctccccacccctcacctgtcagaccacgtcgccaatggcccactggtgcac
cgctggctgcaggcaggtgacacacttcaccgggtgctgtgtctgagccagagcgagaga
caggttctactctgtaggaagccagctttggtctcctcagtagaagccggccaggatccc
aagagcttctcagaaatccagccgggaatgctgcttgttggttttgtgaagagcatcaag
gactatggtgtgtttgtccagttcccctctggtctgagtgggctggctcccaaagcaatc
atgagtgacaagtttgtgacgaacccgagtgaccactttgtcgaggggcagacagtggtg
gcgaaggtgaccaacgtggacgaggagaagcagcggatgctgctgtcgctgcggctctca
gactgcaggctgggaggcccggcgagtggcagcctgctgctcctgagccagtgcctggag
gagttgcagggcgtgcgcagcctcatgagcagccgagactctgtgctggtccaggccctg
gccgagatgaccccgggaatggtcctgaacctagtggtgcaggaagtgtcggaggacggt
tctgtggtgttcaccggggctccagttcgagacctggtcctgagggccagcagataccat
cgagcagggcaggaggtggaatctgggcagaagaagaaggctgtcatcctctatgttgac
atgttgggattagaggtccatgtgtccctccgcaaggagttagtgaatagaaaagcttgg
aagctgaagaaaggcagcgtacaccaggccactgtgcagcacttggaggagtccttcgcg
gtggcctccgtgggggagactggccatctggtggccttctccctggcctctcacctcaac
gacacattccgctttgactcggagaagttgcaggtgggacagagcgtctgcctggtcctc
aagactgcggagccgggagtgactggtcttctcttggctgtcgaggggccggctgccagg
agggtcctgagacagccctgcaaggactcggagatgggggacgagggtgagggggccgac
ccagctctggcagcagggcctagaaagaagcacgggctggccattggggatgtggtcacc
gggacggtgaagtctgttaagccaacccatgtggttgtgaccttggaggatggcgtgatg
ggctgcgtccacgcctcccacgtcctggatgaggttcccgagggcgccgctcccactgcc
acgctgaaggtcgggaagacggtgacagcgcgagtgatcggcgggcgagacgtgaagaca
tttaagttcctcccaataagtcaccctagattcattcgaaccgtcccggagctgagtgtt
cggccaagtgagctggagaaggatggccacaccgtgctgaacacttactcagccagccct
gtggagaagattcagcagtaccgggctggtcagactgtgacttgcttcttaaagaagtac
aatgtggttaagaaatggcttgaagtggagattgcaccggacatccgggggagaattcct
ttgttgctcacatctctcagcttcaaggttctgaaacatccagataagaagttccagatt
ggccaggccttgagggccaccgtggtcggcccagattcctccaagcctttcttgtgtctc
tcactcataggtccacacaagctcaagaagggagaagtggccatgggccgggtggtgaaa
gtgtcgcccagtgagggtttgacggtggccttcccctttgggaggacggggacggtgagc
gtattccacgtgagtgactcctactctgagagacccctgcaggacttcagcccccagaag
gttgtcagatgctatgtcctgtccactgcaaaccatgtattgactttgtcactgcgactg
tccaggacgaaccctgagacgaaaagcaaagtagaagacccagagatcaactccatcctg
gacattaaggaggggcagcttctgcggggcttcgtgcggtccgtggagccgagcggtgtg
ctcctgggcctcgggccctcggttgagggtttggcccggttctcacatgtgtcccagtgc
agcctgcccaagaagggcctctacagcaaatacctccctgaagggaggctgctcaccgcc
agggtcttgaggctagaccccagcaagaacctggtagagttgtccttcctccccggtgac
actggcaagccagatgtgatgtctgtctccccggaacttctggttcagaagcaagaggag
gacgtagaggtcaaggagagggacagaaagggagaaaagaagaggagtccgaaaaggaaa
gagaagaagaaccagaaggggcaagaggagggggagctgcccagcaaggagcaggtcagg
gcaaagcggcctggcaagcgggagcgcctgggctcggagggagcgcaggagagcgcgaac
aagaggcggaagaaggctgggcccccggaggaggaagacagtggcgtggaagtgtactat
cgggagggagccgaggaggaggcggcggaggcagaggtgctgcccacggggacgctgacc
aagcctgcagaagtgccccggctgcgactctcgtcaggcttcttttgggacgtggggctc
gacactctgaccccggccttaccgccccgaggagagaactccgacagcgaggaggatgag
aagccaccccacgccacgcagcagaagaaaagcaagaaggaaagggagttggagaaacag
aaggcagagaaagagctgtcccgcattgaggaggcgctcagggaccctgggcggcagccg
gagtctgcagatgacttcgaccgcctggtgctgagctcccccagcagctccatcctgtgg
ctgcagtacatggccttccacctgcaggccacggagattgacaaggcccgggcagtggcc
gagagggccctgaggaccatctccttcagagaggagcaagagaagctgaacgtgtgggtg
gcgctgctgaacctggaaaacatgtatggctctcctgagtccctgagcaaggtcttcgag
cgcgccgtgcagtacaacgagcctctcaaggtctttctccacctggccgacatctatgcc
aagtccgagaagttccaggaagctggggagctgtataaccgtatgctgaagcgcttccgg
caggagaaatctgtctggatcaaatacggggcctttcttctccggaggggccaggccggg
gccagtcaccgcgtgctgcagcgagccctcgagtgcctgcctgccaaggagcacatggat
gtcatcaccaagtttgcccagctggagttccagctgggagatgcagagcgggccagagcc
atttttgaaaacatgctgagcacctacccaaagcgcactgatatctggtcggtgtacatt
gacatgaccatcaagcacggcagccagaaggaagtccgggacatctttgagcgggttatc
cacctgaacttggcccccaagaagatgaagttcttcttcaagcgctacctggactatgag
aagcagcacggctctgagaaggacgtgcgggcggtgaaagcgaaggccttggagtatgtg
gaggccaggagctctgtgctggaggactag
DBGET
integrated database retrieval system
