Heterocephalus glaber (naked mole-rat): 101705308
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Entry
101705308 CDS
T02812
Symbol
Pcdhb1
Name
(RefSeq) protocadherin beta 1
KO
K16494
protocadherin beta
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hgl04515
]
101705308 (Pcdhb1)
Cell adhesion molecules [BR:
hgl04515
]
Cadherins
Protocadherins
101705308 (Pcdhb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Ig_VWA7
DHHC
PLAC8
Ly49
Motif
Other DBs
NCBI-GeneID:
101705308
NCBI-ProteinID:
XP_004854337
UniProt:
A0AAX6PKY8
LinkDB
All DBs
Position
Un
AA seq
818 aa
AA seq
DB search
MAAARRKTLQSRQVGSLFLFMCVSVGSAATIRYSVAEEMESGSFVANVAKDLGLEVGKLA
ARGARLVPEGNRLHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEIVLVEPLQSFRAE
VRVFDINDNAPIFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSPNAYFHL
HTRFRSHGPKYAELVLDKPLDREEQSEVNLTITAVDGGSPPKSGTAHIRVVVLDVNDHVP
QFSRLVYRAQVPENSANGSFVVMVTATDLDEGTNKEIIYSLSQNPETILQTFQIDSQTGE
VRLRGPLDFESIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMISSVSSPLPEDS
PPQTVVALFTIRDRDVRVGGKITCFLTEDDLPFIVRPTLRNSYSLVTDRSLDREDVSGYN
ITLVAMDTAPPNLSAETVIEVLISDINDNPPVFQEGSYILTVRENNSPAIFIGKVHAEDL
DLGENAQVTYSLLPPKSGDLSVFAYISINSDNGKLYALRTMDYEAIQNFQFVVKATDGGL
LSLSSQVTVRVIVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEPGYLVTKVVAVDGDSGQ
NSWLSYHLLKATDLGLFSVQQQNGEIRTLRQITERDPMMQKLIILVQDHGQPALSTTASL
NILLVDGFSEPYLQFRDSSQHSQKVNPSTKYLVISLAVLSFLFLLSVTMIFIVHIYQKIK
NRDKFTIQEHFYDDCNFPNNLVRGGNGSLSQPCAYDMSSATGTGNSEFRFLKRFMPNFPF
PHATGEVKTEGGSSLPPDSTRNRSRGSEGHSQVSDNYM
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcgcgtaggaaaactttgcagagcaggcaagtgggatctcttttcctgttt
atgtgcgtatctgtggggagtgcagcaaccatccgctattcggtggcggaggagatggaa
agtggctcttttgtagccaatgtggctaaggatttaggattggaggtagggaagctggct
gcgcgcggtgcacggctggttcccgagggcaacaggctgcatttccggctccaccgcaag
acaggagatttgtttgtgaaggagaaactggaccgggagtctctttgtggcaaagccgac
ccttgcgttttgcactttgaaatcgtcctggtggagccgctgcagtccttccgtgcagaa
gtcagggtatttgatatcaatgacaatgcccccatttttctaaacaaggagccgctgtta
aagatcccagagagcacccccttgggttcacgttttcctctgcagagcgcccaggatctg
gacgtgggcctcaacggtctccagaactataccctgagccccaatgcatacttccacctg
cacacccgcttccgcagccacgggcccaaatacgcggagctagtgctggataaacccctg
gatagagaggagcagtctgaagtcaacttgacaatcacagcggtggatggtgggtccccg
cccaagtctggcaccgcccacatccgcgtggtggttttggacgtcaacgaccacgtgccc
cagttctcacgactagtgtaccgcgctcaggtaccagagaacagcgccaacggttctttc
gtggtcatggtgactgccacggacctagatgagggcaccaacaaggaaataatttactca
ttatctcaaaacccagaaacaattcttcagacgtttcagattgactctcaaactggagag
gttcgactccgcgggcctttagattttgaatctatagaaacgtatgacattgatattcaa
gctacagatggaggaggcctctctgcccacagcaaagtcctggtagaagtggtggatgta
aacgataatcctcctgaagtgatgatttcttctgtgtccagccctctccctgaggactca
ccaccacagacggtagtggccctcttcacaatccgagaccgcgatgttcgagtgggagga
aaaatcacttgcttcctcacagaagatgatcttccttttatagtcagacctacattacgg
aattcttactcgctggtcactgacagaagcttggatcgggaggatgtctcgggctataat
atcacccttgttgccatggatactgcaccacctaacctgtccgcagaaactgtgatagag
gtgctgatatctgacataaatgacaatcctccagtgtttcaggaaggttcctacatcttg
actgttcgagaaaacaacagccctgcaatttttattggcaaagtccatgctgaggattta
gatttgggtgagaatgcccaagtaacgtattctctgctgcctcccaaaagtggagatcta
tcagtctttgcttacatttccataaattcagacaatgggaagctctatgcactaagaacc
atggattatgaggccattcaaaattttcagtttgtggtaaaggcaactgatgggggcctc
ctgtcactgagtagccaagttactgtcagagtgattgtacttgatgacaatgacaaccgt
ccaatgatcttgtacccactgcagaatggtactttgccctgtaacgacctggtacctagg
tctgcagagccaggctatctagtgaccaaagtggtggctgttgatggtgactcaggtcag
aattcttggctttcatatcatctacttaaagctactgaccttgggttattctctgttcaa
caacaaaatggggaaatccgtaccttgaggcagataactgaaagagatcccatgatgcaa
aaacttatcattcttgttcaggatcatggccaaccagctctctccactactgcctcactc
aacatcctgctggtagatggcttttcagagccctacctccagttccgggattcatcccaa
cattctcagaaggtaaatccatccactaaatatttggtcatttctctggctgtgctttcc
tttctctttctactctctgtcacaatgatcttcattgtacacatctaccagaagattaaa
aatagagacaagttcacaattcaagaacatttctatgatgactgtaatttccctaacaat
ctggtacgaggaggcaatggatctttatcacagccttgtgcatatgacatgagctcagca
actggcactggaaatagtgagttccggtttcttaagcgctttatgcccaatttccctttc
ccccatgccactggagaggtaaaaacagagggtggctcttctttacctccagattctact
aggaataggtctcgggggtcagagggccattcccaggtatctgataactatatgtag
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