Heterocephalus glaber (naked mole-rat): 101705515
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Entry
101705515 CDS
T02812
Symbol
Dhx16
Name
(RefSeq) DEAH-box helicase 16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101705515 (Dhx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hgl03041
]
101705515 (Dhx16)
Enzymes [BR:
hgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101705515 (Dhx16)
Spliceosome [BR:
hgl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
101705515 (Dhx16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_22
AAA_19
AAA_30
nSTAND3
SecA_DEAD
Flavi_DEAD
SRP54
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
101705515
NCBI-ProteinID:
XP_004847134
UniProt:
A0AAX6PA04
LinkDB
All DBs
Position
Un
AA seq
1041 aa
AA seq
DB search
MATPALERWVQEELHSVLGLSERHVAQFLIGTAQRCASAEEFVQRLRDTDTLDLDGPARD
FALRLWSKVPRKAAAEKPARAAEREARALLEKSRSYQLLEDSEASGEETVGSAGSSLQKK
RKRRKHLRKKRQEEEEEEEGVSESWKKTAGSRQQAEKTAESEDEWERTERERLQDLEERD
AFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLAKRE
REKLEDLEAELADEEFLFGDVELSRPELRELKYKRRVRDLARQYRAAGEQEKLEATSRYR
MPEEARGQPARAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVLEE
EETIEFVRATQLQGDEEPIAPPGSAQAQQESIQAVRRSLPVFPFREELLAAIAQHQVLII
EGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYS
IRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVA
RFRPELKVLVASATLDTARFSTFFDDAPIFRIPGRRFPVDIFYTKAPEADYLEACVVSVL
QIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIF
QPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQNSYNPRTGMESLTVTPCSKASAN
QRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDF
LDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEI
LTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYE
NFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDHIRVRKAITAGYFYHTARLTRSGYR
TVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKE
LEDPHAKKMPKKVGKTREELG
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccggcgctcgagcgctgggtccaggaggagctgcactcggtgctggggctg
agcgagcggcacgtggcccagttcctcatcggaaccgcgcagcgctgcgcctcggccgag
gagttcgtgcagcgcctgcgggacaccgacacgctggacctggacgggccggcgcgggac
ttcgctctgcggctgtggagcaaggtacctcggaaggcggcagcggaaaagccagcgcgg
gcagcagagcgggaggcccgggccctgttggagaagagccggtcgtaccagctgctggaa
gacagtgaggccagcggtgaggagacagtggggagcgcggggagcagcctgcagaagaag
aggaagaggcggaagcacctcaggaagaaacggcaggaggaggaggaggaggaggaaggg
gtttctgagagctggaagaagacagcggggagcaggcagcaggcagagaagacagcggag
tcggaggatgagtgggagcggaccgagcgggagcggctgcaggacctggaggagcgagac
gcctttgccgagcgggtccggcagagggacaaggaccggactcgcaacgtcctggagcgg
tcagataagaaggcttatgaagaggctcagaagcgtctgaagatggccgaggaggaccgg
aaagccatggtcccggagctgcggaagaagtcccgccgcgagtacttggcaaagcgggag
cgagagaagctggaggacctggaggccgagctggcggatgaggagtttctcttcggtgac
gtggagctgagccgacccgagctcagggagctcaagtacaagcggcgcgtgcgggacctg
gcccggcagtaccgggcggccggggagcaggagaagctggaggccaccagccgctaccgc
atgcccgaggaggcccgaggacagccagctcgagctgtggatcttgtggaggaggagtcg
ggcgcccccggggaggagcagaggcgctgggaggaggcccgcctgggagcagcgtccctg
aagtttggggcccgagacgccgcctcacaggagcccaagtaccagctggtgctggaggag
gaggagaccatcgagttcgtccgagccacccagctgcagggtgacgaggagcccatagct
ccgcctggctcggcccaggcccagcaggagtctatccaggccgtgcgccgcagcctccct
gtgttccccttccgggaggagctgctggctgccatcgcacagcaccaggtcctcatcatc
gaaggcgagacgggctcggggaagaccacccagatcccgcagtacctcttcgaggagggt
tacacgaagaagggtatgaagatcgcctgcacccagccccgcagagtggcagccatgagt
gtggccgcccgcgtggcccgggagatgggtgtgaagctcgggaatgaggtcggctacagc
atccgatttgaggattgcacgtcagagcgaacggtcctccgctacatgacggacgggatg
ctgctccgagagtttctctccgagcctgacctggcaagttacagcgtggtgatggtggat
gaggcccacgagcggaccctgcacacagatattctcttcgggttaatcaaggatgttgct
cgcttccgacctgagctcaaggtcctggtagcttcagccacactggacactgcccgattt
tccaccttctttgatgatgcccctatcttccgaattccgggtcgaaggtttcctgtggac
atcttttataccaaggctcctgaggctgactacctggaagcctgtgtggtgtcggtgctg
cagatccacgtgacacagccccctggggacatcttggtgttcctgacagggcaggaggag
atcgaggccgcctgcgagatgctccaggaccgctgccgccgcctgggctccaagatccgc
gagctcctggtgctgcccatctacgccaacctcccctcggacatgcaggcccgcatcttc
cagcccacgccacccggggcccgcaaggtagttgtggcaacaaacattgctgagacatcg
ctcaccattgagggcatcatttacgtgctggacccaggcttctgcaagcagaacagctac
aacccgcgcacaggcatggagtcgctcacggtcacgccctgcagcaaagcctctgccaac
cagcgggctggccgggcgggccgagtggctgcagggaagtgcttccgcctgtacacggcc
tgggcctatcagcacgagctggaggagaccacggtgcccgagatccagaggaccagcctg
ggcaacgtcgtgctgctgctcaagagcttggggatccatgatctaatgcactttgatttc
ctggaccccccgccatacgagaccctgctgctggctctggagcagctgtacgccctggga
gccctcaaccacctcggggagctgaccacgtctgggcggaagatggcagagctgccagtg
gaccccatgctgtctaaaatgatcttggcctcagagaagtacagctgttcagaggagatc
ctgacagtggccgccatgctctctgtcaacaactccatcttctaccgacccaaggataag
gtcgttcacgccgacaatgcccgtgtcaacttcttcctccctggcggcgaccacctggtt
ctgttgaacgtgtacacgcagtgggccgagagtggctactcttcccagtggtgctatgag
aactttgtacagttccgctccatgcgccgagcccgggatgtgcgggagcagctagagggg
ctcctggagcgtgtggaggtggggctcagctcctgccagggggaccacatccgtgtgcgc
aaggccatcactgctgggtacttctaccacacagcgaggctgacacgcagcggctaccgc
acagtcaaacagcagcagacagtgttcattcacccgaactcttccctctttgagcagcag
ccacgctggctgctctaccatgaacttgtcctgaccacgaaggagttcatgcgacaggtg
ttggagatcgagagcagctggcttctggaagtggctcctcactattataaggctaaggag
ctagaagatccccatgctaagaaaatgcccaaaaaagtaggcaagacccgagaagagcta
gggtag
DBGET
integrated database retrieval system
