Heterocephalus glaber (naked mole-rat): 101706151
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Entry
101706151 CDS
T02812
Symbol
Smarcc1
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03082
ATP-dependent chromatin remodeling
hgl04714
Thermogenesis
hgl05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101706151 (Smarcc1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101706151 (Smarcc1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101706151 (Smarcc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hgl03021
]
101706151 (Smarcc1)
03036 Chromosome and associated proteins [BR:
hgl03036
]
101706151 (Smarcc1)
Transcription machinery [BR:
hgl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101706151 (Smarcc1)
Chromosome and associated proteins [BR:
hgl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101706151 (Smarcc1)
PBAF complex
101706151 (Smarcc1)
GBAF(ncBAF) complex
101706151 (Smarcc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
DUF919
BRCT_2
SpeFL
Motif
Other DBs
NCBI-GeneID:
101706151
NCBI-ProteinID:
XP_004835025
UniProt:
A0AAX6NR67
LinkDB
All DBs
Position
Un
AA seq
1106 aa
AA seq
DB search
MAAAAGGGPGAAAGTMGAGGAGAAAAGLAVYRRKDGGPASKFWESPETVSQLDSVRVWLG
KHYKKCVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCH
ILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPNIYLIPDIDLKL
ANKLKDIIKRHQGTFTDEKSKASHHIYPYPSSQEDEEWLRPVMRKEKQVLVHWGFYPDSY
DTWVHSNDVDAEIEDPPIPEKPWKVHVKWILDTDIFNEWMNEEDYEVDENRKPVSFRQRI
PTKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKE
EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVTAGG
KEDEDPSKGDQGRSLDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK
SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD
PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFG
LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH
FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE
EFSRVREEVPLELVEAHVKKVQEAARASGRVDPTYGLESSCIAGTGPDEPEKLEGAEEEK
METDADDQQPEKAENKGENEMDEGDKAQDGENEKNSEKEQDSEVSEDIKSEEKETEENKE
LTDACKERENDTAKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV
ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQIEQ
QQHGQNPAQAHQHAGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQMPGP
GSMMPSQPMPGRMMPTVTANIHPAGSGPAPPGMPPMPGNILGPRGPLTAPNGMYPPPPQQ
QQPPPPPPADGIPPPPAPGPPASATP
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcggcgggcgggggcccgggggcggcggcaggaaccatgggcgcggggggc
gcgggggcggcggccgcgggcctggccgtgtatcggcggaaggacgggggcccggcgagc
aagttctgggagagcccggagacggtgtcgcagctggactcggtgcgcgtgtggctgggc
aagcactacaagaagtgtgttcacgctgatgcgcctaccaataagacgctggctggactg
gtggtgcagcttctccagttccaggaagatgcctttgggaagcatgtcaccaacccagcc
ttcaccaagctgcctgcaaagtgtttcatggacttcaaagctggaggcaccttgtgtcac
attcttggggctgcttacaagtataaaaacgaacaggggtggcggagatttgatttacag
aatccatccagaatggatcgtaacgttgaaatgtttatgaacattgaaaaaacattggtg
cagaacaattgtctgaccagacccaacatctacctcattccagacattgatctgaagttg
gctaacaaattgaaagatatcatcaaacgacatcaggggacgtttactgatgagaagtcg
aaagcttcccaccatatttatccatatccttcctcacaagaggatgaagaatggttgagg
ccagtgatgagaaaagagaagcaggtgttagtacactggggcttttaccccgacagctat
gatacttgggtccatagtaatgatgttgatgctgaaattgaagatccaccaattccagaa
aagccgtggaaggttcacgtgaaatggattttggacactgacattttcaatgaatggatg
aatgaggaagattacgaagtggatgagaataggaagccagtgagttttcgtcaacgaatt
ccaacaaagaacgaagagccagtcagaagtccagagagaagagatcggaaggcatcagct
aatgctcgcaagaggaaacattcgccttcacctccccctcctacacccacagaatcacgg
aagaaaagtggcaaaaagggccaagctagtctttatgggaagcgcagaagtcagaaggag
gaagacgagcaagaggatcttaccaaggacatggaggacccaacaccagtacccaatata
gaggaagtagtgctccccaagaacgtaaacccaaagaaagatagtgaaaatacacccgtt
aaaggaggaactgtggcagatctagatgagcaggatgaagaaacagtcacagcaggagga
aaggaagatgaagatcctagcaaaggtgatcagggtcggtcacttgaccctggtgaagat
aatgtcacggagcagaccaatcacattatcattcccagctacgcctcgtggtttgattat
aactgtattcatgtaattgagcggcgtgcacttcctgagtttttcaatggaaaaaataaa
tccaagactccagaaatatacctggcatatcgaaactttatgattgacacgtatcgcctg
aacccccaggagtatttgaccagcactgcttgtcggaggaatttgacgggagatgtgtgt
gccgtgatgagggttcatgcctttctagagcagtggggactcgttaattaccaagtggat
ccggaaagtcggcccatggccatgggaccccctcctactcctcatttcaatgtgttagct
gacaccccctccgggcttgtgcctctgcatcttcgatcacctcaggtccctgctgctcag
cagatgttaaattttcctgagaagaacaaggaaaaaccaattgatttgcagaactttggt
cttcgtactgacatttactccaagaaaacattagcaaagagtaaaggtgctagtgctgga
agagagtggacggaacaggagacccttctcctcctggaggccctggagatgtacaaggat
gattggaacaaagtgtcagaacatgttggaagccgcactcaagatgagtgcatcctccac
tttctgcggcttcctattgaagacccgtacctcgagaattcggatgcttccctcgggcca
ctggcctaccagcctgtcccgttcagtcagtcgggaaacccagtcatgagcactgtggca
tttttggcctctgtggtggaccctcgtgtagcatctgccgcagcgaaggcagctctggag
gagttttctcgagtccgggaggaggtgccgctggagttggtggaagcacatgtcaagaaa
gtgcaagaagctgcacgcgcctctgggagggtggatcccacctatggtttggagagcagc
tgcattgcaggcactgggcccgacgagcctgagaaactggaaggagctgaagaggaaaaa
atggaaacagatgctgatgatcagcagcctgaaaaggcggagaacaaaggagaaaatgaa
atggatgaaggtgataaagcacaagatggagaaaatgaaaaaaatagtgagaaagaacag
gatagtgaagttagtgaagatatcaaatcagaagaaaaggagaccgaagagaacaaggaa
ctcactgatgcatgtaaagaaagagaaaatgacaccgcgaagaagaaagtagaacatgag
atttctgaaggaaacgttgccactgccgcggcagctgcgcttgcctcagctgctaccaaa
gccaagcacctggctgctgtggaagaaagaaagatcaagtctctggtagctctgctggtt
gagacacaaatgaagaaactagagatcaaacttcgtcattttgaggagcttgaaactatc
atggacagagagaaagaggctctagaacagcagaggcagcagttgcttacggaacgacag
aacttccacatggagcagctaaaatacgccgagttacgtgcccgacagcaaatagagcag
cagcagcatggccagaaccctgcacaggcacatcagcacgcagggggtcctggcctggcc
ccacttggagctgccgggcacccgggcatgatgccccatcagcagccccctccctaccca
ctgatgcaccaccagatgccaccgcctcacccgccccagccaggtcagatgccaggccca
ggttccatgatgcccagccagcccatgccaggccgcatgatgcccactgtcacagctaac
atccaccctgctgggagcggccctgcccctcctgggatgcctccgatgccggggaacatc
ttagggccccgagggcccctcacagcacccaacggcatgtatccccctccaccgcagcag
cagcagccaccaccacctccacctgcagatggcatccctcctccacctgctccaggccca
ccagcctcagccactccgtag
DBGET
integrated database retrieval system
