Heterocephalus glaber (naked mole-rat): 101706423
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Entry
101706423 CDS
T02812
Symbol
Smarca2
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03082
ATP-dependent chromatin remodeling
hgl04714
Thermogenesis
hgl05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101706423 (Smarca2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101706423 (Smarca2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101706423 (Smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hgl03021
]
101706423 (Smarca2)
03036 Chromosome and associated proteins [BR:
hgl03036
]
101706423 (Smarca2)
Transcription machinery [BR:
hgl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101706423 (Smarca2)
Chromosome and associated proteins [BR:
hgl03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
101706423 (Smarca2)
Chromatin remodeling factors
BAF complex
101706423 (Smarca2)
PBAF complex
101706423 (Smarca2)
GBAF(ncBAF) complex
101706423 (Smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
101706423
NCBI-ProteinID:
XP_004838270
UniProt:
A0AAX6SG59
LinkDB
All DBs
Position
Un
AA seq
1590 aa
AA seq
DB search
MSTPTDPAAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHQMPAM
GSADFPQEGMHQLHKPMDGMLDKGIVEDLHCTTMKGTGMRPPHPGMGPPQSPMDQHSQGY
LSPHPSPLGAPEHVSSPISGGGPTPPQMPPSQPGPLIPGDPQTMNQANRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQATPQPQPQPQPQQQPVLVNYSRPSGPGLEVVSGTSTPQKLQVP
VTSGRPSPAPPATAPPTNAVPGPSVQQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEI
LQEREYRLQARIAHRIQELENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRR
DTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDF
KEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKK
DRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGESALGPDGE
PIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDSDY
EEEDEEEESSRQETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYY
TVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIAL
ITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGK
FNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGT
PLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVL
RPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGA
KTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKL
RATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIF
LLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEE
KILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQM
IARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEK
IFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVE
KAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYY
ELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFK
SARQKIAKEEESEEESNEEEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNR
GKAKPVVSDFDSDEEQDENEQSEASGTDDE
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcccacagacccagctgcaatgccccaccctgggccctcgccagggcccgga
ccttctcctggaccgattctgggacccagtccaggaccaggaccttccccaggctccgtc
cacagcatgatggggccaagtcctgggccccccagcgtctcacatcagatgccagccatg
ggctctgccgacttccctcaggaaggcatgcatcagctgcataaacccatggatgggatg
ctcgacaaggggattgtggaagacctccattgtacaaccatgaagggcactggtatgcga
cctcctcacccaggaatgggccctccccagagtcccatggatcaacacagccaaggttat
ctgtcaccacacccatctccgttgggcgccccagaacacgtctccagccctatatctgga
ggaggcccaacgccgccccagatgccaccaagccagccaggacctcttatcccaggtgat
ccacaaaccatgaaccaggccaacaggggtccctcgcctttcagtcctgtccagctgcat
cagctgcgggcccagattttagcttacaaaatgctggcccggggccagcccctccctgaa
acactgcagcttgcagtccaggggaaaaggacactgcctggcatgcagcagcagcagcag
cagcaacaacaacaacaacaacagcagcagcagcagcagcaacaacaacaacaacagcag
cagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcaggcaacacca
cagccgcagccacaaccacagccgcagcagcagccagtgcttgttaactatagcagacca
tctggcccaggactggaggtggtgagcgggaccagcaccccgcagaagctgcaggtgccc
gtgaccagtggccggccctctcctgcaccccctgccaccgcaccgcccaccaatgctgtg
cctggcccctctgtccagcagccagccccgggacagccctcgcctgtccttcagctgcag
cagaagcagagccgcatcagccccatccagaagcctcagggcctggaccccgtggaaatc
ctgcaggagcgggagtacagacttcaggcacgcatagctcataggatacaagaactggaa
aatctacctggctctttgccaccagatttacgaaccaaagcgaccgtggaactgaaagca
cttcggttactcaatttccagcgtcagctgagacaggaggtggtggcctgcatgcgccgg
gacaccaccctcgagacagccctcaactccaaagcctacaaacggagcaagcggcagact
ctgcgagaagcacgcatgactgagaagctggagaagcagcagaagattgagcaggagcga
aagcgccggcagaaacaccaggaatacctgaatagtattttgcaacatgcaaaagatttt
aaggaataccatcgatccgtggctgggaagatccagaaactttccaaagcagtggcaacc
tggcatgccaatactgaaagggagcagaagaaggagacagagcggattgagaaggagaga
atgcggagactaatggctgaagatgaagagggctacaggaaactgatcgatcaaaagaaa
gacaggcgtttagcctaccttttgcagcagactgacgagtatgtggccaatctcaccaac
ttggtttgggagcacaagcaagcccaagcggccaaagagaaaaagaagaggaggaggagg
aagaagaaagctgaagagaatgcagagggaggggagtctgccctaggaccggatggagag
ccaatagatgagagtagccagatgagtgatctgcctgtcaaagtgacgcacacagaaact
ggcaaggtcctgttcggaccagaagctcccaaagcaagtcaactggatgcctggttggaa
atgaaccctggttacgaagttgcccctagatctgacagtgaagagagtgattctgactac
gaggaggaggatgaggaagaagagtccagtaggcaggaaacagaagagaaaatccttcta
gatcccaacagtgaagaagtttctgaaaaggatgctaaacagataatcgagacagcaaag
caagatgtggatgatgagtacagtatgcagtacagtgccagagggtcccagtcctactac
actgtggctcacgccatctcagagagggtagagaagcagtctgccctcctcattaatggg
accctaaagcattaccagctccagggcctggaatggatggtttccttgtataataacaat
ttgaatggaatcttagctgatgaaatggggctaggcaagaccatacagaccattgcactc
atcacttacctgatggagcacaaaagactcaatggcccctatctcatcattgttcccctt
tcgactctatctaactggacatatgaatttgacaagtgggctccttcggtggtgaaaatt
tcttacaagggtacccctgcaatgcgccgctcccttgtcccccagctacggagtggcaaa
ttcaatgtcctcttgactacttacgagtacattataaaagacaagcacattcttgcaaag
attcggtggaaatacatgatcgtggacgaaggccaccgaatgaagaatcaccactgcaag
ctgactcaggtcttgaacactcactatgtggcccccagaagaatcctcttgaccgggacc
ccattgcagaataagctccctgaactctgggccctcctcaacttcctcctccctacaatt
ttcaagagctgcagcacatttgaacagtggtttaatgctccatttgccatgactggagaa
agggtggacttaaatgaagaagaaaccatactgatcatcaggcgtcttcacaaggtgctg
agaccatttttattgaggagattgaagaaagaagttgaatctcagcttccagaaaaagtt
gaatatgtgatcaagtgtgacatgtcagctctacagaagatcctctatcgccacatgcag
gccaagggcatcctcctcacagatggctctgagaaagataagaagggaaaaggaggtgca
aagactcttatgaacactatcatgcagctgagaaagatctgtaatcacccctatatgttt
cagcacattgaggaatcctttgctgaacacctgggctattcaaatggggtcatcaatggg
gctgagctgtatcgggcctcgggaaagtttgagctacttgatcgtattctgccaaaactg
agagcgactaatcaccgagtgctgcttttctgccagatgacgtctctcatgaccatcatg
gaggattacttcgctttccggaacttcctttacctgcgtcttgatggcaccaccaagtct
gaagatcgtgctgctttgctgaaaaaattcaatgaacctgggtcccagtatttcattttc
ttgttgagcacccgagcaggaggcctgggattaaacctccaggcggctgacacagtggtc
atctttgacagcgactggaacccgcatcaggatctgcaagcacaagaccgggctcatcgc
attggtcaacagaacgaggtccgggtgctgagactctgcaccgtgaacagtgtggaggaa
aagattctcgcagctgcaaaatacaagctgaatgtggatcagaaagttatccaggctggc
atgttcgatcagaagtcttcaagccatgagcggagagcatttctgcaggccatactggag
cacgaagaggaaaatgaggaagaagatgaagtaccagatgatgagactctgaaccaaatg
attgcgcggcgagaagaggagtttgacctttttatgcgaatggacatggaccggcggaga
gaagatgcccggaatcccaagcgcaagcctcgcttaatggaggaagatgagctgccctcc
tggattattaaggatgatgctgaagtggaaaggctcacgtgtgaggaggaggaagagaaa
atctttggtagggggtctcgtcagcgccgcgatgtggactacagcgatgccctcacggag
aagcagtggctcagggccattgaagacggcaatttggaagaaatggaagaggaagtacgg
cttaagaagagaaaaagacgaagaaatgtggataaagatcctgcgaaggaagatgtagaa
aaagctaagaagaggagaggccgccctccagctgagaaactgtcaccaaatccccccaaa
ctgacaaaacagatgaacgccatcatcgatactgtgatcaactacaaggatagttcaggg
cggcagctcagtgaagtcttcattcagttaccttccaggaaagagttaccagaatactat
gaattaattaggaagccagtggatttcaaaaaaataaaggaaagaattcgtaatcataag
taccggagcctgggtgacctggagaaggatgtcatgcttctctgccacaacgctcagaca
ttcaatttggaaggatcccagatctatgaagactccatcgtcttacagtcagtgtttaag
agtgcgcggcagaaaattgccaaagaggaagaaagtgaggaggaaagcaatgaagaagag
gaagaggaagatgaagaggagtctgaatctgaggcaaaatctgttaaggtgaaaatcaaa
ctcaataaaaaagatgagaaaggccgggacaaagggaaaggcaagaaaaggccaaatcga
ggaaaagcaaagcctgtagtgagtgattttgacagcgacgaagaacaggatgaaaacgaa
cagtcagaagcaagtgggaccgatgatgagtga
DBGET
integrated database retrieval system
