Heterocephalus glaber (naked mole-rat): 101707011 Help Entry 101707011         CDS       T02812                                  Symbol Col3a1 Name (RefSeq) collagen type III alpha 1 chain   KO K19720   collagen type III alpha Organism hgl  Heterocephalus glaber (naked mole-rat) Pathway hgl04611   Platelet activation hgl04820   Cytoskeleton in muscle cells hgl04926   Relaxin signaling pathway hgl04933   AGE-RAGE signaling pathway in diabetic complications hgl04974   Protein digestion and absorption hgl05146   Amoebiasis hgl05415   Diabetic cardiomyopathy Brite KEGG Orthology (KO) [BR:hgl00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     101707011 (Col3a1)  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     101707011 (Col3a1)   09152 Endocrine system    04926 Relaxin signaling pathway     101707011 (Col3a1)   09154 Digestive system    04974 Protein digestion and absorption     101707011 (Col3a1)  09160 Human Diseases   09174 Infectious disease: parasitic    05146 Amoebiasis     101707011 (Col3a1)   09166 Cardiovascular disease    05415 Diabetic cardiomyopathy     101707011 (Col3a1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     101707011 (Col3a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:hgl00536]     101707011 (Col3a1) Glycosaminoglycan binding proteins [BR:hgl00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    101707011 (Col3a1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC TILa Motif Other DBs NCBI-GeneID:  101707011 NCBI-ProteinID:  XP_004872361 UniProt:  A0AAX6QD17 LinkDB All DBs Position Un AA seq 1465 aa AA seqDB search MMSFVQKGTWLLLALLHPTVILAQQTPEVDEGGCTYLGQSYAARDVWKPEPCQICVCDSG SVLCDDIICDEENLDCPNPEIPFGECCAACPQPSTPAPVPSGRGPQGPKGDPGPPGIPGR NGDPGTPGQPGSPGPPGTPGICQSCPTGTQNYSPQFDSYDVKSGVGGVSGYPGPAGPPGP PGPPGTSGHPGAPGSPGYQGPPGEPGQAGPAGPPGPAGAIGPVGPAGKDGESGRPGRTGE RGLPGPPGIKGPAGMPGFPGVKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGP RGAPGERGRPGLPGAAGTRGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGS SGAPGARGEPGPQGHAGAQGPPGPPGNNGSPGGKGEMGPAGIPGAPGLMGARGPAGPPGT NGAPGQRGSPGEPGKNGAKGEPGARGERGEAGSPGIPGTKGEDGKDGSPGEPGANGVPGA AGERGAPGFRGPAGPPGLAGEKGPAGERGGPGPAGPRGGAGEPGRDGAPGTPGMRGAPGS PGGPGNDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGG PGLPGPSGKNGETGPQGPPGPTGPSGDKGDSGPPGPQGLQGLPGTAGPPGENGKPGEAGP KGDVGSPGTPGGKGDAGAPGERGPPGLAGTPGLRGGAGPPGPEGGKGPAGPPGPPGASGS PGLQGMPGERGGPGGPGPKGEKGEPGGAGVDGAPGKDGPRGPTGPIGPPGPAGQPGDKGE GGAPGLPGIAGPRGGPGERGEHGPPGPAGFPGAPGQNGEPGAKGERGAPGEKGEGGAPGI AGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGASGAPGK DGPPGPAGNSGSPGSPGVSGPKGDAGQPGEKGPPGAQGPPGAPGPLGLAGITGARGLAGP PGMPGPRGSPGPQGIKGESGKPGTSGHNGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGQ PGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGETGPAGPAGSPGPAGV RGAPGPQGPRGDKGETGERGSNGIKGHRGFPGNPGPPGSPGAAGHQGAVGSPGPAGPRGP VGPSGPPGKDGTSGHPGPIGPPGPRGNKGERGSEGSPGHPGQPGPPGPPGAPGPCCGGGA AISGIGGGEKSALGFVPYYGDEPMDFKINTEEIMSSLKSVNGQIESLISPDGSHKNPARN CRDLKMCHPELKSGEYWVDPNQGCKMDAIKVFCNMETGETCLSASPSSIPLKNWWRDSGA EKKHVWFGESMDGGFQFSYGNPELPEDVLEVQLAHLRLLSSRASQNITYHCKNSIAYMDQ ASGNVKKALKFMGSNEGEFKAEGNSKFTYTVLEDGCTKHTGEWSKTVFEYRTRKAMRLPI IDISPYDIGGPDQEFGVDVGPVCFL NT seq 4398 nt NT seq  +upstreamnt  +downstreamnt atgatgagctttgtgcaaaaggggacctggttacttcttgctctgcttcaccccactgtt attttggcgcaacagaccccagaagttgatgaaggaggatgcacctatcttggtcaatcc tatgccgctagagatgtctggaagccagaaccatgccaaatatgcgtctgtgactcagga tcagttctctgtgatgacataatatgtgatgaagaaaacttagactgccccaacccagaa atcccctttggagaatgttgtgcagcttgtccacaaccttcaacacctgctcctgtcccc agtggtagaggacctcaaggccccaaaggagatcctggccctcctggtattcctgggaga aatggtgaccctgggaccccaggacaaccaggttcccccggtcctcctggtacccctggc atctgtcagtcatgtcctactggcacacagaactattctccacagtttgactcatacgat gtcaagtctggagtaggaggagtcagtggctatcctgggccagctggtcctccgggtcct cctggtccccctggtacttctggtcatcctggtgcccctggttctccaggatatcaaggt ccccctggtgaacctggacaagctggtcccgcaggccctccgggacctgctggtgctata ggtccagtcggtcctgctggaaaagatggagaatcgggtcggccgggacgaactggagaa cgtggcttgcctggccctccgggtatcaaaggcccagctggcatgcctggattccctggt gtgaaaggacacaggggctttgatggacgaaatggagaaaagggtgaaacaggtgctcct ggattaaagggtgaaaatggtcttccaggtgaaaatggagctcctggacccatgggtcca agaggagctcctggtgagagaggacgaccaggactccctggggctgcagggactcgaggc aatgatggtgctcggggcagcgatggccaaccgggcccccctggtccccctggaactgca ggattccctggatctcctggtgctaagggtgaagttggacctgcagggtcccctggttca agtggagcccctggagcaagaggagaacctggacctcagggacatgctggtgctcagggt cctcctggcccccctgggaataatggcagtcccggtggtaaaggagaaatgggtcccgct ggtattcctggtgctcctggactgatgggagcccggggccctgcagggccacctggtact aatggtgcccctgggcagcgaggtagtccgggtgaacctggtaagaatggtgcaaaagga gagccaggagcacgcggtgaacgtggtgaagctggctccccaggtattccaggaactaag ggtgaagatggcaaagatggatcccctggagaacccggagcaaacggagtgccaggtgct gcaggagaaaggggagctcctggattccgaggacctgctggacccccaggccttgcagga gaaaagggtcccgctggggagcgtggtggcccaggccctgcaggacccagaggaggggct ggagaacctggccgagatggtgcccctggaactccgggaatgaggggtgctcctggaagc cccggaggaccaggcaatgatggcaaaccagggcctcccggaagtcaaggagaaagtggt cgccctgggcctcctgggccatctggtcctcgaggtcagcctggtgtcatgggtttccct ggtcctaaaggaaatgatggtgctcctgggaagaatggagaacgaggtggccctggaggg cctggacttccaggtccttctggaaagaatggtgaaactggacctcagggtcccccgggc cctactgggccatctggtgacaaaggagattcaggaccacctggtccccaaggattacag ggcttgcctggtactgctggccctccaggagaaaatggaaaacccggtgaagcaggtccc aagggtgatgttggttcgcctggaactcccggaggcaagggtgatgctggtgcccccggt gaacgtggaccccctggattggcagggaccccaggtcttaggggaggagcgggtccccct ggccccgaaggaggaaagggccccgctggtccccctgggccacccggcgcttctggtagt cctggtctgcaaggcatgcctggagaaagaggaggccctggaggtcctggtccaaaaggt gaaaagggtgaaccaggcggcgctggtgtggacggcgcccccgggaaagacggcccacgg ggtcctacaggtcctattggtcctcctgggccagctggtcagcctggagataagggtgaa ggtggtgctcctggacttccaggtatagctggacctcgtggtggccctggtgaaagaggt gaacatgggcccccaggacctgctggtttccctggcgctcctggacagaacggcgagcct ggggctaagggagaaagaggtgcccctggtgagaaaggagaaggtggagctcccggaatt gctggaccccctggtggttctggccctgcgggtcctcctggtccccaaggtgtcaaaggt gaacgtggcagtcctggtggtcctggtgctgctggctttcctggtgcacgtggtcttcct ggtcctcctggcagtaacgggaacccaggaccccctggtgcgagtggtgctccaggcaag gatgggcccccaggtcccgcagggaacagcggttctcctggaagtcccggggtgtctgga ccaaaaggcgatgctggtcaaccaggagagaaggggcctcccggcgctcaaggccctcca ggagccccgggcccactcggacttgcagggatcactggagcacggggtcttgctggacca ccaggcatgccaggtcctcggggaagccccgggcctcagggcatcaagggtgaaagtggg aagccaggaaccagtggccacaatggcgaacgtggacctcctggaccacagggtctccct ggtctggctggtactgctggtgaacctggaagagacggaaaccctggatcagatggtcag ccaggccgagatggatctcctggtggcaagggtgatcgaggtgaaaatggctctcctggg gccccgggtgcacctggtcatccaggcccccctggtcctgtgggtccagctggaaagagt ggtgacagaggagaaacgggccctgctggtcctgctggttctcctggtcctgctggtgtc cgaggtgctcctggtcctcaaggcccacgtggtgacaaaggtgaaactggtgaacgtggg tctaatggcatcaaaggacatcgagggttccctggcaatccaggccccccaggctctcca ggtgctgctggtcaccagggtgctgttggtagtccaggacctgctggtccccgaggacct gttggacccagcggacctcctggcaaagatggaacaagtggacatcctggtcccattggg ccacccgggcctcgaggcaacaaaggcgaacgggggtctgagggttccccaggccatcca gggcaacctggtcctcctggaccccctggtgcccctggtccttgctgtggtggtggtgct gccatctctgggattggaggtggtgaaaaatctgctcttggttttgtaccatattatgga gatgaaccaatggattttaaaatcaacactgaagagataatgtcttcactcaaatctgtt aatggacaaatagaaagcctcattagtcctgatggttcccacaaaaaccctgctaggaac tgcagagacctgaaaatgtgccaccctgaactcaagagtggagaatattgggttgatcct aaccaaggctgtaagatggacgctatcaaagtattctgtaatatggaaactggggaaaca tgcctaagtgccagtccttcttccattccactgaaaaactggtggagagattctggtgct gagaagaaacatgtttggtttggagagtccatggatggtggttttcagtttagctatggc aatcctgaacttcctgaagatgtgctcgaggtccagttggcacacctccgacttctctcc agccgggcctcccagaacatcacataccactgcaagaatagcatcgcatacatggatcag gccagtgggaatgtaaagaaagccctgaagtttatggggtcaaatgaaggtgaattcaag gctgaaggaaacagcaaattcacatacacagttctagaagatggctgcactaaacacact ggggaatggagcaaaacagtctttgaataccgaacacgcaaggccatgagactgccgatt atagatatttcaccctatgatattggtggtcctgatcaagaattcggtgtggacgttggc cctgtttgctttttataa

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