Heterocephalus glaber (naked mole-rat): 101707672 Help Entry 101707672         CDS       T02812                                  Symbol Col2a1 Name (RefSeq) collagen type II alpha 1 chain   KO K19719   collagen type II alpha Organism hgl  Heterocephalus glaber (naked mole-rat) Pathway hgl04151   PI3K-Akt signaling pathway hgl04510   Focal adhesion hgl04512   ECM-receptor interaction hgl04974   Protein digestion and absorption hgl05165   Human papillomavirus infection Brite KEGG Orthology (KO) [BR:hgl00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     101707672 (Col2a1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     101707672 (Col2a1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     101707672 (Col2a1)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     101707672 (Col2a1)  09160 Human Diseases   09172 Infectious disease: viral    05165 Human papillomavirus infection     101707672 (Col2a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:hgl00536]     101707672 (Col2a1) Glycosaminoglycan binding proteins [BR:hgl00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    101707672 (Col2a1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC TILa Motif Other DBs NCBI-GeneID:  101707672 NCBI-ProteinID:  XP_004863159 LinkDB All DBs Position Un AA seq 1487 aa AA seqDB search MVRLGAPQTLVLLTLLVAAVLRCQGQDAIENRNCLQDGESYNDKDVWKPEPCRICVCDSG FILCDDIICEDTKDCLNPEIPFGECCPICPADRATASGQPGPKGQKGEPGDIKDIVGPKG PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG PRGPAGPPGKPGDDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVG PAGGPGFPGAPGAKGEAGPTGARGPEGGQGPRGEPGNPGSPGPAGASGNPGTDGIPGAKG SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQAGEPGIAGFKGEQGPKGETGPAGPQG APGPAGEEGKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG VMGFPGPKGANGEPGKAGEKGLAGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG PSGFQGLPGPPGAPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRG LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGITGPKGDRGDVGEKGPEGAPG KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPG ADGQPGAKGEQGEAGQKGDAGSPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDGGPPGRAGDPGLQGPAGPPGEKGEPG DDGPSGADGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGSSGDRGPPG PVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGDTGAVGGPGAPGPPGSPGPSG PTGKQGDRGEAGAQGPMGPAGPAGARGIPGPQGPRGDKGESGEPGERGVKGHRGFTGLQG LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG PPGNPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPLQYMRADQAAGTLRQHDVEVDATLK SLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMDTG ETCVYPNPANVPKKNWWSSKSKEKKHVWFGETINGGFHFSYGDDNLAPNTANIQMTFLRL LSTEGFQNITYHCRNSIAYLDEVAGSLKKALLLQGSNDVEIRAEGNSRFTYTVLKDGCTK HTGKWGKTVIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVEIGPVCFL NT seq 4464 nt NT seq  +upstreamnt  +downstreamnt atggtccgcctcggggctccccagacgctggtactgctgacgctgctcgtcgccgctgtc ctgcggtgtcagggccaggatgccatagagaatcgcaactgcttgcaggatggggagagt tataatgataaagatgtatggaagcccgaaccctgccggatctgtgtctgtgacagtggt tttatcctctgcgatgacataatctgtgaagacacgaaagactgcctcaaccctgaaatc cccttcggagaatgctgccccatctgcccagctgaccgtgccactgccagtggacaacca ggaccaaagggacagaaaggagaacctggagacatcaaggatattgtaggacccaaagga cctcctgggcctcagggacctgctggtgaacaaggtcccagaggtgatcgtggtgacaaa ggagaaaaaggtgcccctggacctcgaggcagagatggagaacctgggacccctggaaat cccggccctcctggtcctcctgggccccccggcccccctggccttggtggaaattttgct gcccagatggctggaggatttgatgagaaggctggtggtgcccagatgggagtaatgcaa ggacccatgggccccatgggacctcgaggacctccagggcctgctggtgctcctggccct caaggatttcaaggcaaccctggtgaacctggcgaacctggtgtttctggtcccatgggt ccccgtggtcctgctgggccccctggaaaacctggtgatgatggtgaagctggaaagcct ggaaaatctggtgaaagaggcccacctggccctcagggtgctcgtggcttcccaggaacc ccaggccttcctggtgtcaaaggtcacagaggttacccaggcctagatggtgctaaggga gaagctggtgccccaggtgtgaagggtgagagtggttcccctggggagaatggctctcca ggcccaatgggacctcgtggcctgcctggtgagagaggacggactggccctgctggtgct gcgggtgcccgaggcaatgatggccagccaggcccggctgggcctccgggtcccgttggt ccagctggtggtcctggcttccctggtgctcctggtgccaagggtgaggctggccccact ggagcccgtggtcctgaaggtggtcaaggtccccgaggcgaaccgggcaaccctgggtcc cctgggcctgctggtgcttccggaaaccccggaactgatggcatccctggagccaaagga tctgccggtgctcctgggattgctggtgctcctggcttccctgggccccgtggtcctccc ggtcctcaaggtgctacaggtcctctgggtccaaaaggtcaggcgggtgagcctggtatt gctggcttcaaaggcgaacaaggcccgaaaggagaaacgggtcctgctggcccccaggga gctcccggtcctgctggtgaagaaggcaaaagaggtgctcgtggagagcctggtggtgcg gggcccattggtccccctggagagagaggtgctcctggcaaccgcggtttcccaggtcag gatggtctggcaggtcccaagggagcccctggagagcgagggcccagtggccttgctggc cccaagggagccaatggtgaccctggccgtcccggagaacctggccttcccggagcccgg ggtctcactggtcgccctggtgatgctggtcctcaaggcaaagttggtccatctggagct cctggtgaagatgggcgccctggacctccaggtcctcagggggctcgtgggcagcctggt gtcatgggtttccctggccccaagggtgccaatggagagcctggcaaagctggcgagaag ggactggctggtgctcctggtctaagaggtcttcctggcaaagatggtgagacgggtgct gcagggcctcctggccccgctggacctgctggtgaacgaggcgagcagggtgctcctggg ccatctggattccagggacttcctggccctccgggtgccccgggtgaaggtggaaaacca ggtgaccagggtgttcctggtgaagctggagcccccggcctcgtgggtcccaggggtgaa cgaggctttccaggtgaacgtggatctcccggtgcccagggcctccagggtccccgtggc ctccctggcactcccggcacagatggtcccaaaggtgcctctggcccagctggccctcct ggggctcagggccctccaggtctgcagggaatgcctggcgagagaggagcggcaggcatc actgggcccaagggagacaggggcgatgttggtgagaaaggccctgagggcgcccctgga aaggatggcggacgaggtctgaccggtcccatcggcccccctgggccagcaggtgccaat ggggagaagggagaagttggacctcctggccccgccggaagtgctggtgctcgcggtgcc ccgggtgaacgtggggagactgggcctcccggacctgctggatttgctggaccccctggt gctgatggacagcctggtgccaagggtgagcaaggagaggccggacagaaaggtgatgct gggtcccctggtcctcagggcccctctggagctcctgggcctcagggtcctactggagtg actgggcctaaaggagcccgaggtgctcaagggcccccgggagccaccggattcccggga gccgctggccgcgtcggacccccaggttccaatggcaaccctggaccccctggtccccct ggtccttctggaaaagatggtcccaaaggtgctcgaggagatggtggtccccctggccga gctggtgaccctggcctccagggtcctgcaggaccccctggcgagaagggagagcccgga gatgacggtccctctggtgctgatggtcctccaggcccccagggtctggctggtcagaga ggcattgttggtctgccgggacagcgtggtgagagaggattcccgggcctgccgggccca tcgggtgagcctggcaagcagggcgcacctggctcatctggagaccgaggtcctcctggc cctgtggggcctcctggcctgacgggtcctgcaggtgaacctggacgagaggggagccct ggtgctgacggcccccctggcagagatggcgcggcgggagtcaagggtgatcgcggtgac actggtgccgtgggtggtcccggagcccctgggcctcctggctctcccggcccctccggc cccactggcaagcaaggagacagaggagaagctggtgcacagggccccatgggacccgca ggaccagctggagcccgaggaatcccaggccctcaaggcccccgaggtgacaaaggagaa tctggagaacctggagagaggggagtgaagggtcaccgtggcttcactggcctgcagggt ctacctggccctcctggtccttctggagaccaaggtgcttctggtcctgctggcccctct ggccctagaggtccccctggccctgtcggtccctctggcaaagatggtgctaatggaatc cctggccccattgggcctcctggtccccgtggacgctcaggcgaaactggccctgctggt cctcctgggaatccgggcccccctgggcccccaggtccccctggccctggcattgacatg tctgcctttgctggcctaggccagagagagaagggccccgaccccctgcagtacatgcgg gctgaccaggcagccggtaccctgagacagcatgatgtggaagtggatgccacactcaag tccctcaacaaccagattgagagcatccgtagccccgagggctcccgcaagaaccctgct cgcacctgccgggacctgaaactctgccacccagagtggaagagtggagactactggatt gaccccaaccaggggtgcaccttggatgccatgaaggtcttctgtaacatggacacagga gaaacctgcgtctaccccaacccagccaatgtgcccaagaagaactggtggagcagcaag agcaaggagaagaagcacgtctggtttggagaaaccatcaatggtggcttccatttcagc tatggagatgacaacctggctcccaacactgccaacatccagatgaccttcctacgcctg ctgtccacggagggcttccagaacatcacctaccactgcaggaacagcattgcctacttg gatgaagtagctggcagcctcaagaaggccctgctcctccagggctctaacgatgtggag atacgggctgagggcaatagcaggttcacgtatactgtcctgaaggatggctgcacgaaa cacaccggtaagtggggcaagactgtcattgagtaccggtcacagaagacctcacgcctc cccatcattgacattgcccctatggacataggagggccagagcaggaatttggcgtggag atagggcctgtctgcttcttgtaa

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