Heterocephalus glaber (naked mole-rat): 101708602
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Entry
101708602 CDS
T02812
Name
(RefSeq) cleavage stimulation factor subunit 2-like
KO
K14407
cleavage stimulation factor subunit 2
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101708602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hgl03019
]
101708602
Messenger RNA biogenesis [BR:
hgl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
101708602
U7-dependent histone pre-mRNA processing factors
101708602
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
101708602
NCBI-ProteinID:
XP_012925917
LinkDB
All DBs
Position
Un
AA seq
549 aa
AA seq
DB search
MVGLTVRDPAVDHSLCSVFVGNIPHEASEEQLRDIFSEVGPVVSFRWVYDRETGKPKGYG
FCEYQDQETALSAMQHLNGHEFSGRALRVDSAASEKNKELKCLGTGAPVIESPXGETIRP
EDAPKSISKAAASLLPEQMFEVLKQMKLGVQNSLQEAQNMLLQNPQLAYALLQAQVVMRI
VDLEIPLKILHHQTNSPTLITGNPEPVHGAGPGLGANVSVNQQNPQAPQAQSLGGVPASG
QMPAAVTGPGPGSLAPGGGMQPQLGMTGHGPVSIERGQVPMQDPRAAVQQRSLPANVPTP
RGLLGGAPNDPQGGTLLSVTGEVEPRGYLGPFHQGPPMYHVPGHEGHGPPSHEIRGGPLA
DPRPLMVEPRGPMLDQRGPPLDGRGGRDPWGIDARGMEAKAMNARGLDARGTDPCAMEAL
AMEACTMEDRGMEARGMDTRGPVPAPRGSIRSGIQGPTPINTGAVGPQGARQVPVMQGIG
MQGVSMQGGSQPSGFSPGQNQVTPQNHEKAALIMQIFQLTADLIAILPPEQRQSILILKE
QIQKSSGAP
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggtgggattgactgtgagagaccctgcagtggatcattctctatgttcggtgttcgtg
ggtaacattcctcatgaagctagtgaagagcagttgagagacatcttttctgaggttgga
cctgttgttagtttcagatgggtatatgatagggagacaggaaaaccaaagggctatggc
ttctgtgaataccaagaccaagagacagctcttagtgccatgcagcacctgaatgggcat
gaattcagtgggagagcacttcgagttgacagtgctgccagtgaaaagaacaaagagctg
aagtgtcttggcactggtgcccctgtcattgagtcaccttaaggagagaccatccgtcct
gaggatgcccccaagtccattagcaaagcagctgccagtcttctaccagagcagatgttt
gaggtgttgaaacaaatgaagctcggtgtccagaatagtctgcaggaagcacagaacatg
ttacttcagaacccacagctggcttatgctttgctgcaagcacaggtagtgatgagaatt
gtggatctagagattcccctgaaaattctgcatcaccagacaaatagcccaacactgatt
acaggcaatcctgaaccagtccatggagctggacctggcttaggagccaatgtgtcagtg
aaccagcagaatcctcaagcccctcaggcccagtctttgggtggggttccagcatcaggg
cagatgccagctgctgtaacaggacctggccctggttccttagctcctggaggaggaatg
cagcctcagcttggaatgacaggacacggaccagtgtccatagaacggggacaagtgccg
atgcaagaccccagagctgctgtgcagcagagatctttgcctgccaatgtcccaacacct
cgaggtctgttaggaggtgctccaaatgacccacagggaggcactttactttctgtaact
ggagaggtagagcctagaggttacctgggaccatttcatcaaggtccacccatgtaccat
gttcctggccatgagggccatggaccaccctcacatgagataaggggagggccattagct
gaccccagacctctaatggtagagccaagaggacccatgctagatcaaaggggtccaccc
ttggatgggagaggtggaagagatccctggggaatagatgcacgagggatggaagccaaa
gccatgaatgcaagaggtttagatgccagagggacggatccctgtgctatggaagctctc
gctatggaagcttgcaccatggaggaccgagggatggaggccagagggatggataccagg
ggcccagtgccagcccctagaggatctatacgtagtggaatccagggccccaccccaatt
aacactggggcagttggcccccaaggagctaggcaggtcccagtcatgcagggaataggc
atgcaaggagtaagcatgcagggtggaagccagcccagtggttttagtcctgggcagaac
caagtcacaccacagaaccatgagaaggctgctttgatcatgcagatctttcaactgact
gcagatctgattgccattttgcctcctgagcaaaggcagagtatcctaatcttaaaggaa
caaatacagaaatccagtggagcaccttga
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