Heterocephalus glaber (naked mole-rat): 101708643
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Entry
101708643 CDS
T02812
Symbol
Cnot6l
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101708643 (Cnot6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hgl03019
]
101708643 (Cnot6l)
Enzymes [BR:
hgl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
101708643 (Cnot6l)
Messenger RNA biogenesis [BR:
hgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101708643 (Cnot6l)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101708643 (Cnot6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
101708643
NCBI-ProteinID:
XP_004848074
UniProt:
A0AAX6QWG2
LinkDB
All DBs
Position
Un
AA seq
550 aa
AA seq
DB search
MPKEKYDPPDPRRIYTIMSAEEVANGKKSHWAELEISGRVRSLSTSLWSLTHLTALHLND
NYLSRIPPDIAKLHNLVYLDLSSNKLRSLPAELGNMVSLRELLLNHNMLRVLPYELGRLF
QLQTLGLKGNPLSQDILNLYQDPDGTRKLLNFMLDNLAVHPEQLPPRPWITLKERDQILP
SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ
YFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV
AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGMKPIHAAEKQLLIVANAHMHWDP
EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSN
GGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYTNYTFDFK
GVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHFSLLTQLELHPPILPL
VNGVHLPNRR
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggaaaaatatgatcctccagatcctcgcagaatttataccatcatgtcagca
gaggaggtagccaatgggaaaaaatctcactgggcagaattagaaatctcgggtagagtg
cggagcttaagtacatcactttggtcattgacacacttgacagcgctgcacctaaatgac
aattaccttagtcgcattccacctgatattgccaagcttcataatctggtttacctggat
ctgtcatccaataaactcagaagtttaccagcagaactaggaaacatggtgtctctcagg
gaattgcttttaaatcacaatatgttacgggttttgccttatgaacttggtcggctcttc
cagctacaaactctaggtttgaaaggcaatcctttgtcacaggatattctcaacttatac
caggacccagatggaacccgaaagctactgaatttcatgcttgacaatcttgcagttcat
ccagagcagcttcctccgaggccatggattacattaaaagaacgagaccaaattctgcca
tcagcatcattcacggttatgtgttacaatgtgttatgtgataaatacgctacccggcag
ctatatggctattgcccatcctgggcattaaactgggaatacaggaaaaagggaattatg
gaagaaattgttaactgtgacgcagatatcattagtcttcaggaagtggaaacagagcaa
tacttcactctctttctgccagcattgaaggagcgtggatatgatggatttttttctcca
aagtcacgtgccaaaatcatgtctgagcaggaaagaaaacatgtggatggttgtgcaata
ttcttcaaaacagaaaaatttacattggtgcagaagcatacagtagaatttaaccaggtg
gcaatggctaattcagatggatctgaagctatgctcaacagagtgatgacaaaagataac
attggtgttgctgtggtattagaggtccacaaagaactatttggagcaggtatgaagcct
attcatgctgcagaaaaacagctgcttatagtggcaaatgcccacatgcattgggaccca
gagtattctgatgtgaaacttatccagaccatgatgtttgtctcagaggttaaaaacatt
ctggaaaaagcctcgagtagacctggcagcccaactgcagatcctaattccatcccgctg
gtgctatgtgcagatcttaactcattgccagattcaggtgttgtggaatatttaagcaat
ggaggagtagctgacaaccataaagacttcaaggaactaaggtacaatgagtgtcttatg
aacttcagctgcaatggaaagaatggaagctcagaagggagaatcacacatggcttccaa
cttaagagcgcctatgaaaataacttgatgccttacaccaattacacctttgatttcaaa
ggtgtgattgactacattttctattccaagactcatatgaacgtgcttggtgtcctgggg
cctttagatcctcaatggctggttgagaacaacatcactgggtgtccacaccctcacatc
ccttcagaccacttctcactgttaacacaacttgaactccaccctccaatcctgcctctt
gtcaatggtgttcacttgcctaatcggaggtag
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