Heterocephalus glaber (naked mole-rat): 101708942
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Entry
101708942 CDS
T02812
Symbol
Col23a1
Name
(RefSeq) collagen type XXIII alpha 1 chain
KO
K24355
collagen type XXIII alpha
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101708942 (Col23a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hgl00536
]
101708942 (Col23a1)
Glycosaminoglycan binding proteins [BR:
hgl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101708942 (Col23a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
101708942
NCBI-ProteinID:
XP_012932825
LinkDB
All DBs
Position
Un
AA seq
441 aa
AA seq
DB search
MSVKAVLNGWVQNALLGQAVQDQLRAWKAGGAHRRGDICGALLGSGPPGQSGRDGYPGPL
GLDGKPGLPGPKGEKGAPGDFGPWGEQGQDGAAGPPGPPGPPGARGPPGDTGKDGPRGAQ
GPAGPKGAPGQHGETGPKGAPGPKGEDGMPSQPGLPGPPGPKGEPGSAGPQGQSGMDGAP
GPKGEPGPRGTDGAAGPRGPPGLKGEQGDTVVIDYDGRILDALKGPPGAQGAPGPPGIPG
AKGELGLPGAPGIDGEKGPKGQKGDPGEPGPAGPKGEAGEVGLSGLPGADGPKGEKGDSA
SESLQESLAQIIAEPGPPGPPGPPGLPGIQGPKGLDGAKGEKGASGERGPSGLPGPVGPP
GLIGLPGTKGEKGRPGEPGLDGFPGARGEKGDRSERGEKGERGVPGRKGVKGQKGEPGPP
GLDQPCPVGQDGLPVPGCWHK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaaagccgtgctaaacggctgggtgcaaaacgcgctcctgggccaggccgtg
caggaccagttgagagcgtggaaggctggaggcgcgcacaggcgaggggacatctgcggg
gctctcctgggcagtggtcctccaggacaatcaggacgagatggctacccgggaccactt
ggtctggatggcaaacccggacttccaggccccaaaggggaaaagggtgcgccaggagac
ttcggcccctggggggaacaagggcaagatggagctgcagggcctccagggccacctggg
ccgcctggggcccggggccctcctggtgacactgggaaagacggcccccgaggagctcaa
ggcccggcgggtcccaagggagcgcctgggcagcacggcgagacgggccccaagggagcc
ccagggcccaagggggaggacgggatgcccagccagccagggctccccgggcccccaggc
cccaagggcgagccagggagtgcggggccccaaggacagagcggcatggacggcgcccca
ggcccgaagggggagcccggccctagaggcaccgatggagccgcggggccccggggtccc
ccgggcctcaagggcgagcagggagacacagtggtgatcgactacgacggcaggatcttg
gatgccctgaagggtccccccggggcgcagggagccccagggccaccagggatccccgga
gccaagggtgagctcgggttgccgggtgccccaggaatcgatggagagaagggtcccaaa
gggcagaaaggagacccaggagagcccgggccggcggggcccaaaggggaagcaggcgag
gtgggcttgtccggcctgccgggcgctgatggccccaagggagagaagggagactcggca
tctgagagcctgcaggagagcctggcccagatcatagcggaaccagggccccccgggccc
cccggccccccgggcctcccgggaatccagggccccaagggcctggacggagcaaaggga
gagaaaggcgcatcaggcgagagaggccctagcggcctgccagggccagtcggcccgccg
ggccttattgggctgccaggaaccaaaggagagaagggcagacccggggagccaggactc
gatggcttccctggtgcccgaggtgagaaaggcgaccggagtgagcgtggagagaagggg
gagcgaggtgtccccggccggaaaggcgtgaagggccagaagggagagccagggccgcca
ggcctggaccagccgtgccctgtgggacaagatgggctgcccgtgcctggctgctggcat
aagtga
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