Heterocephalus glaber (naked mole-rat): 101709338 Help Entry 101709338         CDS       T02812                                  Symbol Col4a5 Name (RefSeq) collagen type IV alpha 5 chain   KO K06237   collagen type IV alpha Organism hgl  Heterocephalus glaber (naked mole-rat) Pathway hgl04151   PI3K-Akt signaling pathway hgl04382   Cornified envelope formation hgl04510   Focal adhesion hgl04512   ECM-receptor interaction hgl04820   Cytoskeleton in muscle cells hgl04926   Relaxin signaling pathway hgl04933   AGE-RAGE signaling pathway in diabetic complications hgl04974   Protein digestion and absorption hgl05146   Amoebiasis hgl05165   Human papillomavirus infection hgl05200   Pathways in cancer hgl05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:hgl00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     101709338 (Col4a5)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     101709338 (Col4a5)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     101709338 (Col4a5)   09142 Cell motility    04820 Cytoskeleton in muscle cells     101709338 (Col4a5)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     101709338 (Col4a5)   09154 Digestive system    04974 Protein digestion and absorption     101709338 (Col4a5)   09158 Development and regeneration    04382 Cornified envelope formation     101709338 (Col4a5)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     101709338 (Col4a5)   09162 Cancer: specific types    05222 Small cell lung cancer     101709338 (Col4a5)   09172 Infectious disease: viral    05165 Human papillomavirus infection     101709338 (Col4a5)   09174 Infectious disease: parasitic    05146 Amoebiasis     101709338 (Col4a5)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     101709338 (Col4a5)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:hgl04147]     101709338 (Col4a5)    00536 Glycosaminoglycan binding proteins [BR:hgl00536]     101709338 (Col4a5) Exosome [BR:hgl04147]  Exosomal proteins   Exosomal proteins of other cancer cells    101709338 (Col4a5) Glycosaminoglycan binding proteins [BR:hgl00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    101709338 (Col4a5) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  101709338 NCBI-ProteinID:  XP_012933784 LinkDB All DBs Position Un AA seq 1635 aa AA seqDB search MKLRGVSLAVGLFLLALSVWGQPAEAAACYGCPPGSKCDCSGVKGKKGERGFPGLEGHSG LPGFPGPEGPPGPPGQKGDVGIPGPLGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG IPGCNGTKGERGYPGSPGFPGLQGPPGPPGIPGMKGEPGNIIMASLPGPKGNPGYPGPPG IQGPAGPMGIPGPTGPPGPPGLLGPPGPPGPPGPKGNMGLNFQGPKGEKGEQGLQGPPGP PGQISEQKRPIDVEFQKGDQGLPGDQGPPGPPGIRGPPGPPGGGKGEKGEQGEPGKRGKP GKDGENGQPGNPGLPGDPGYPGEPGRDGEKGQKGDIGPPGPPGVVIPRPGTGVTTGEKGN TGLPGLPGEKGEQGFPGMQGPPGLPGLPGTAVMGPPGPTGFPGERGQKGDEGPPGISIPG SPGLDGHPGPPGLPGPPGPPGPHIPPSDETCEPGPPGPPGAPGDKGLQGEQGLKAMGIPG APGAPGLPGTKGEPGDIFTFPGMKGEKGEFGAPGAPGLPGLPGMPGQDGFPGLPGPKGEP GGIAFKGERGPPGNPGLPGLPGNMGPMGPVGFGPPGPIGEKGIQGIAGNPGQPGIPGPKG DPGQTITQPGKPGLPGNPGRDGEVGLPGDLGLPGQPGLPGIPGSKGEAGIPGIGLPGPPG PKGFPGVPGPPGATGIPGRIGLEGPPGPPGFPGPKGEPGFGLPGPPGPPGLPGFKGTLGP KGDRGFPGPPGPPGRTGLNGLPGPKGDVGPNGQPGPIGPPGQPGIGVQGPPGPPGIPGPM GQPGLHGIPGEKGDPGLPGFDVPGPPGERGSPGIPGVLGPVGPPGSPGLPGKAGAPGFPG TKGEMGMMGPPGAPGPLGIPGRNGAPGLKGNDGLQGQPGLPGSAGEKGGKGEPGLPGPPG PRDPNLLASKGEKGERGLPGIPGISGPKGYQGLPGDPGQPGLSGEPGLPGLPGPKGDPGF PGQPGLIGPPGLKGNIGDMGFPGPQGVEGLTGPPGVPGQPGSPGLPGQKGDKGDPGISGI GLSGLTGPKGEPGLPGIPGNPGIKGSMGVTGLPGLPGTPGAKGQPGLSGFPGTPGLPGPK GISGPPGNPGLPGEPGPIGGGGHPGPPGPPGEKGTPGQDGIPGPAGQKGEPGQPGFGIPG APGLPGLSGQKGDGGLPGIPGNPGLPGLKGEPGFQGFPGVQGPPGPPGSPGPALEGPKGN SGPQGPPGRPGPPGLPGPEGPRGLPGNGDVKGERGNPGPPGPPGLPGLKGDQGPPGLSGN PGRPGLNGMKGDPGLPGVPGFPGMKGPIGVPGSTGPEGEPGLTGSPGPPGLPGPSGHSII IKGDAGPPGIPGQPGLKGPPGLSGPQGLPGPVGPPGDPGRNGLPGFDGAGGRKGDTGLPG QPGARGLDGPPGLDGLQGPPGPPGTTSVAHGFLITRHSQTVDAPQCPQRTVQISEGFSLL YVQGNKRAHGQDLGTSGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSME PLKGQSIQPFISRCVVCEAPAMVIAVHSQTIQIPHCPQGWDSLWIGYSFMMHTSAGAEGS GQALASPGSCLEEFRSAPFIECHGLGTCNYYANSYSFWLATIDVLDMFSKPQSETLKAGD LRTRISRCQVCMKRT NT seq 4908 nt NT seq  +upstreamnt  +downstreamnt atgaaactgcgtggagtcagcctggctgtcggcttgttcttactggccctgagtgtttgg gggcagcccgcagaggctgcggcttgctatggttgtcctccaggatcaaagtgtgactgt agtggtgtaaaaggaaaaaagggagagagaggatttccaggtttggagggccattcaggt ttgcctggatttccaggtccagaagggcctccagggcctccaggtcaaaagggtgatgtc ggaattccaggaccactgggaccaaaaggaatcagaggtcctcctggacttcctggattt ccagggacaccgggtcttcccggaatgccaggccatgatggagctcctggtcctcaaggt atccctggatgcaatggaaccaagggagaacgtggatatccaggcagtcctggttttcct ggtttacagggtcctccaggacctcctgggatccctggtatgaagggggaacccggtaat ataattatggcatcactgccaggaccaaagggtaacccaggatatccaggtcctcctgga attcaaggcccagctggtccaatgggaatacctgggccaactggtcctccaggaccgcca ggtttgttgggccctcctggcccaccaggaccaccaggaccaaaggggaatatgggttta aattttcaaggacctaagggtgaaaagggtgagcaaggtcttcagggccctcctggacca cctgggcagatcagtgaacagaaaagaccaattgatgtagagtttcagaaaggagatcag ggacttcctggtgaccaagggcctcctggacctccagggatacgtggtcctccaggtcct ccaggtggtgggaaaggtgagaagggtgagcaaggagaaccaggcaaaagaggtaaacca ggcaaagatggagagaatggtcaacctggcaatccaggtttacctggtgatcctggttac cctggtgaaccaggaagggatggtgaaaagggccaaaaaggcgacattggtccacctggg cctcctggagttgtaattcctagacctggtactggtgtcactacaggagaaaaaggaaat actggcttacctggtttgccgggagaaaaaggagagcaaggatttcctggaatgcagggt ccacctggccttcctggtcttccaggcactgcagttatgggtcctcctgggcccactgga tttcctggagaaagaggccagaaaggtgatgaaggtccacccggtatttctattcctgga tctcctggacttgatggacatcctgggcctcctggccttccaggacctcctggcccacca ggccctcacatccctcctagtgatgagacatgtgaaccaggacctccaggtcccccagga gctccaggtgataaaggactccaaggagaacaaggattgaaagctatgggcataccagga gctccaggtgctccaggacttcctggaactaaaggggagcctggtgacatcttcactttt ccaggaatgaagggtgaaaaaggagagtttggtgctcctggagctccgggacttcctggt ttacccggcatgcctgggcaggatggatttccaggtcttcctggccccaaaggagagcct ggtggaattgcttttaagggtgaaagaggtccccctgggaatccaggtttgccaggtctc ccagggaatatgggacccatgggccctgttggttttggccctcctggtccaataggtgaa aaaggcatacaaggtattgcaggaaacccaggccagccaggaataccaggtcctaaaggt gatccaggtcagaccataacacagccagggaagcctgggctgcctggcaacccaggtaga gatggtgaagtaggtcttccaggtgatcttgggctcccaggccaaccgggtttgccagga atacctggtagcaaaggagaagcaggtattcctgggattgggcttcctggaccaccaggt cccaaaggttttccaggagtcccaggacctccaggagcaactgggatccccgggagaatt ggtctagaaggccctcctgggccaccaggctttccaggaccaaagggagagccaggattt gggttacctgggccacctgggccaccaggacttccaggtttcaaaggaacacttggtcca aaaggtgatcgtggtttcccaggacctccaggtcctccaggacgcactggcttgaatggg ctacctggacctaaaggtgatgttggaccaaatgggcagcctggaccaataggacctcct gggcagccaggaattggtgttcagggaccaccaggaccaccaggaattcctggaccaatg ggccaaccaggcttacatggaataccaggagagaagggggatccaggacttcctggattt gatgttccaggacctcctggtgagaggggcagtccagggatccctggagtacttggccct gtgggacctccaggatcaccagggctcccaggaaaggcaggtgcccctggattcccaggc accaaaggtgaaatgggtatgatgggacctccaggcgcaccaggacctttaggaattcct ggcaggaatggtgctcctggtcttaaaggcaatgatggcttacagggtcagccaggactt cctggctctgcaggagaaaaaggtggtaagggagaacctggccttccaggccctcctgga ccaagggatccaaatctcctagcctcaaaaggagaaaagggagaacgtggcttaccaggt attcctggaatctcaggaccaaaaggctaccagggtttgcctggagacccagggcaacct ggactgagtggagaacctggattaccaggactaccaggtcccaagggtgatcctggtttc cctggccagccaggacttataggacctcctggacttaaaggaaacataggtgatatgggt tttccaggtcctcagggtgtggaaggactgaccggacctcctggagttcctggacaacct ggttccccaggattacctggacagaaaggagacaaaggtgatcctggcatttcaggcatt ggtctttcaggtcttactggcccaaagggtgaacctggtctgccgggaatcccagggaac ccaggtatcaaaggttctatgggagttactggtttacctggattaccaggaacacctgga gcaaaaggacaacctggactttctgggttcccaggaaccccaggccttcctgggccaaaa ggaattagtggtcctcctgggaatcctggccttccgggagaacctggtcctataggtggt ggaggtcatcctgggcccccagggcctccaggtgaaaaaggaacaccaggtcaagatggt atccctgggccagctggacagaagggtgaaccaggtcagccaggttttggaattccagga gcccctggactcccaggactttctggtcaaaagggtgatggagggttacctggcattccc ggaaaccctggccttccaggtctaaagggtgaaccaggctttcagggtttccctggtgta cagggtcccccaggccctcctggttctccaggtccagctctcgaaggccctaaaggcaac tctgggccgcaaggtcctcctggaagaccaggtcctccaggtctaccaggtccagaaggt ccccgtggtctccctggaaatggagatgttaaaggagaaaggggaaacccaggcccacct gggccacctggcttgccgggtctgaaaggagatcaaggaccaccgggactctcgggtaat cctggccggccaggtctcaatggaatgaaaggagatcctggtcttcctggtgttccagga ttcccaggcatgaaaggacccattggagtacctggttcaactggccctgagggggaacca ggacttactggatccccaggtcctcctggattacctggtccttcaggacacagtattata atcaaaggagatgctggtcctccagggatccctggccagcctggtttaaaaggtccacca ggactatcaggccctcaaggcttaccaggtccagttggtcctccaggggatcctggacgt aatggacttcctggctttgatggtgcaggagggcgcaaaggagacacaggtctgccaggc cagccaggtgcccgtggtttggatggtcctccaggactagatgggttgcaaggtccacca ggtccccctggaaccacttcagttgcccatggatttctcatcacacgccacagccagaca gtggatgcaccacaatgcccacagagaacagtccagatctctgaaggtttttctctcttg tatgtacaaggaaataaaagagcccatggtcaagacttgggaacctctggcagctgtctt cgtcgcttcagtaccatgcctttcatgttctgcaatatcaataatgtttgcaactttgct tcaagaaatgactattcttactggctttctactccagagcctatgccaatgagcatggaa cccttgaagggtcagagcattcagccattcatcagtcgatgtgtagtatgtgaagctcca gctatggtgattgcagttcacagtcagaccatccagattcctcattgtcctcagggatgg gattctctgtggattggttactcctttatgatgcatacaagtgcaggggcagagggctca ggtcaagccctggcctcacctggctcctgtttggaagagtttcgttctgctcccttcatc gaatgtcatgggctaggaacgtgtaactactatgccaactcctacagcttttggctagca actatagatgtgttggacatgttcagtaagcctcaatcagaaacactgaaagcaggagac ttgaggacacgtattagccgatgccaagtatgcatgaaaaggacataa

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