Heterocephalus glaber (naked mole-rat): 101709706
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Entry
101709706 CDS
T02812
Symbol
Pcdh17
Name
(RefSeq) protocadherin 17
KO
K16499
protocadherin delta 2
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hgl04515
]
101709706 (Pcdh17)
Cell adhesion molecules [BR:
hgl04515
]
Cadherins
Protocadherins
101709706 (Pcdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
NUC153
PepSY
Motif
Other DBs
NCBI-GeneID:
101709706
NCBI-ProteinID:
XP_012927515
UniProt:
A0AAX6SWM6
LinkDB
All DBs
Position
Un
AA seq
1188 aa
AA seq
DB search
MYLSICCCFLLWAPALTLKNLNYSVPEEQVAGTVIGNIGKDARLQAGLPPAERGGSGGRS
KSGSYRVLENSAPHLLDVDADSGLLYTKQRIDRESLCRHNAKCQLSLEVFANDKEICMIK
VEIQDINDNAPSFPSDQIEMDISENAAPGTRFPLTSAHDPDAGENGLRTYLLTRDDHGLF
ALDVKSRGDGTKFPELVIQKALDREQQNYHTLVLTALDGGEPPRSATVQINVKVIDSNDN
SPVFEAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVRELFSIDPK
TGLIRVKGNLDYEENGMLEIDVQARDLGPNPIPAHCKVTVKLIDRNDNAPSIGFVSVRQG
ALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGSGGGGGLGGPGGSIPFKLEENYD
NFYTVVTDRPLDRETQDEYNVTIVARDGGSPPLNSTKSFAVKILDENDNPPRFTKGLYVL
QVHENNIPGEYLGSVLAQDPDLGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGAIYALRS
FNYEQTKAFEFKVLAKDSGAPAHLESNATVRVTVLDVNDNAPVIVLPTLQNDTAELQVPR
NAGLGYLVSTVRALDSDFGESGRLTYEIVDGNDDHLFEIDPSSGEIRTLHPFWEDVTPVV
ELVVKVTDHGKPTLSAVAKLIIRSVSGSLPEGVPRVNGEQHHWDVSLPLIVTLSTISIIL
LAAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGKGKKKKINKNDIMLVQSEVEERNA
MNVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASNNLTVPQGHAGCHTSFTGQ
GTNSSETPATRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQAD
SDQDTNKGSCCDMSVREALKMKTTSAKSQPLEQAFPTLLSFAILTLHTITTRLQSVDLLP
PEPEECINCTDECRVLGHSDRCWMPQFPAANQAENADYRTNLFVPTVEANVETETYETVN
PTGKKTFCTFGKDKREHTILIANVKPYLKAKRALSPLLQEVPSASSSPTKACIEPCTSTK
SSLEGCEAKPGALAEASSQFLPTDSQYLSPSKQQRDPPFMASDQMARVFADVHSRASRDS
SEMGAVLEQLDHSSRDLGRESVDAEEVVREIDKLLQDCRGNDPVAVRK
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttccatctgttgctgctttcttctatgggcccctgccctgactctcaaaaat
ctcaactactcagtgccagaggagcaagtggccgggactgtgatcggcaacataggcaag
gatgctcgactgcaggcagggcttccgccggctgagcgcggtggcagcggagggcgaagc
aagtcgggcagctaccgggtgctggagaactcggcgccgcacctgctggacgtggacgcc
gacagcgggctcctctacaccaagcagcgaatcgatcgtgagtccttgtgccgccacaat
gccaagtgccagctgtccctcgaggtattcgccaacgacaaggagatctgcatgatcaag
gtagagatccaggacatcaacgacaacgctccctccttcccctctgaccagatcgaaatg
gacatctcggagaacgctgccccgggcacccgctttccccttaccagcgcacacgacccg
gatgccggcgagaacgggctccgcacctatctgctcacgcgcgatgaccacggtctcttt
gccctggacgtcaagtcccgcggcgacggcaccaaattccccgagctggtcatccagaag
gcactggaccgcgagcaacagaactaccacacgctcgtgctcaccgccctggatggcggg
gagccgccgcgctccgccacggtgcagatcaacgtgaaggtgatcgactccaatgacaac
agcccggtcttcgaagcgccctcttacttggtggaactgcccgagaacgccccgctgggc
accgtggtcatcgatctgaacgccaccgacgcggatgaggggcccaacggcgaagtgctc
tattccttcagcagctacgtgcccgaccgcgtgcgggagctcttctccatcgacccgaag
accggcctgatccgggtcaagggcaacctcgactatgaggagaacggtatgctggagatc
gatgtccaggccagagatcttggacccaacccgatcccggcccactgcaaggtcacagtc
aagctcatcgaccgaaacgacaacgcgccgtctatcggtttcgtctccgtgcgccagggg
gcgctcagtgaggccgccccgcccggcacggtcatcgccctggtgcgggtcactgaccga
gactcgggcaagaatgggcagctgcagtgtcgggtcctgggtggaggtgggagcggcggc
ggcggcggcctgggggggccagggggctccatccccttcaaactggaagagaactacgac
aacttctacacagtagtgactgaccgcccgctggaccgcgagactcaggacgagtacaat
gtgaccatcgtggcgcgggacgggggctcgcctccgctcaactccaccaagtcgttcgca
gtcaagattctggacgagaacgacaaccctccccgtttcaccaaagggctgtacgtgctg
caagtgcatgagaacaacattccaggagaatacctgggttccgtgcttgcccaggatcct
gatctcggtcagaacgggactgtgtcctactccatcttaccctcgcacatcggtgacgtc
tccatctacacctatgtgtctgtgaaccccaccaacggggccatatacgccctgcgctcc
ttcaactacgagcagaccaaggcgtttgagttcaaggtgcttgctaaggactcgggggcg
cccgcgcacttggagagcaacgccacggtgagggtgacggtgttagacgtgaacgacaac
gcgccggtgatcgtgctgcccacgctgcagaacgacaccgccgagctacaggtcccgcgc
aacgctggcctgggctacctggtgagcaccgtgcgcgccctcgacagtgacttcggagag
agcggccgcctcacatacgagatcgtggacggcaacgacgatcacttgtttgagatcgat
ccatccagcggggagatccgcacgctgcaccccttctgggaggacgtgacgcccgtcgtg
gagctggtggtgaaggtgacagaccacggcaagcccactctctccgcggttgccaaactc
atcattaggtcggtgagcggctccctgcccgagggagtgccccgggtgaacggcgagcag
caccactgggacgtgtccctgccactcatcgtgactctcagtactatctccatcatcctc
ctagcggccatgatcaccatcgctgtcaagtgcaagcgcgagaacaaggagatccgcact
tacaactgccgcatcgctgaatacagtcacccgcagctgggcgggggcaaaggcaagaag
aagaaaatcaacaaaaacgatatcatgctggtgcagagcgaggtagaagagaggaacgcc
atgaacgtcatgaacgtggtgagcagtccctccctggccacctcccctatgtacttcgac
taccaaacccgcctgcccctcagctcgccccggtcagaggtgatgtatctcaaaccggcc
tccaacaacctcactgttccccaggggcacgcaggctgccacaccagcttcacgggacaa
gggactaattcgagcgagacccctgccactcggatgtccataattcagacagacaatttt
cccgcagagcccaattacatgggcagcaggcagcagtttgttcaaagtagctccacgttt
aaggacccagaaagagccagcctgagagacagtgggcacggggacagtgatcaggctgac
agtgaccaagacactaacaaaggctcctgctgtgacatgtctgttagggaggcactcaag
atgaaaactacttcagctaaaagccagccacttgaacaagcattcccgactttgctttcc
tttgctatcctcaccctacacaccatcacaactagacttcagtctgttgatctgctgcca
ccagaaccagaagagtgtattaattgcacagatgaatgccgagtgcttggtcattctgac
aggtgttggatgccacagttccctgcagccaatcaggctgaaaatgcagattaccgcaca
aatctctttgtacccacagttgaagctaatgttgagactgagacttatgaaactgtgaat
cccactgggaaaaagactttttgtacatttggaaaagacaagcgagagcacactattctc
attgccaatgttaaaccttatttaaaagccaaacgtgccctgagccctctcctccaagag
gtcccttcagcatcaagcagccccaccaaggcctgcatcgagccttgcacctcaacaaaa
agctccctggaaggttgtgaagcaaaaccaggagccctggctgaggcaagcagtcagttc
ttgcccactgacagtcagtatctgtcacccagtaagcaacagagagaccctcccttcatg
gcctcggatcagatggcaagggtcttcgcagatgttcattccagagccagccgggattcc
agtgagatgggtgcagtcctggagcagcttgaccattccagccgggatctgggcagagag
tctgtggatgctgaggaagttgtgagagaaatcgataagcttttgcaggactgccgtggg
aatgacccagtggctgtgagaaaatga
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