Heterocephalus glaber (naked mole-rat): 101709845
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Entry
101709845 CDS
T02812
Symbol
Pnldc1
Name
(RefSeq) PARN like, ribonuclease domain containing 1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101709845 (Pnldc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hgl03019
]
101709845 (Pnldc1)
Enzymes [BR:
hgl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
101709845 (Pnldc1)
Messenger RNA biogenesis [BR:
hgl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101709845 (Pnldc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
101709845
NCBI-ProteinID:
XP_004869071
LinkDB
All DBs
Position
Un
AA seq
531 aa
AA seq
DB search
MDLGADEFEQSLPLLQKLLREADFVGLDIEFTGLRSNLSGLQQISLFDLPSDWYLKTRQS
IQQFTICQIGLSVFSSIEGESNMYIAHSCNFFLFPTTFGILDTEFSFQASSVQFLNQYGF
NYNKFLKKGIPYMNEEQEKKIKHSILTGNWKVRSSLDKDQIKVVINEVTRWLDLAEEGDQ
MTLPGIAGFQAFEVQLVLRQALPNIWTVLRDRGVIVKKVSQQHRWYLEHASGDRDSCWKE
QILLSARGFSVFFQMLVQAQKPLVGHNMMMDLLHLHEKFFRPLPESYDQFKQNIHNLFPV
LIDTKNVTKDIWKELHFPRVSNLLEVYEVLNSNLNPTKDSAPVIVHGNKCEKYAKKKCPH
EAGYDAFLCGSVLLKVAHLLLQRVHGHVPTSEPSFPQYLDVLAPYVNQVNLIRAGVPKIN
FSGPDFPSIRPPILILTVRKWPGVSEQQVYGEFQNLCKFDVRRLTQSQFLLLTNKFKDVR
SVLKEYRCHPTLQVSLYRYWRHSPNVNCMLQVCSVVAAWALLGFLLGRSSP
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggacttgggcgctgacgagtttgagcagagcctcccgctgctgcagaagctcctccgg
gaggcggacttcgtgggtctggacatagagttcactggacttcgttctaacctgtctggg
ctccagcagatcagtctttttgatttgccatctgactggtatctaaagacccgacagagt
attcagcaatttacaatctgtcagattggattgtctgtattctccagcattgaaggagag
tcaaacatgtatatagcccattcttgtaacttctttctcttccctacaacgtttgggatt
ttggacacagaattctctttccaggcatctagtgttcagtttttgaatcaatatggcttc
aactataacaagtttctcaaaaaaggaattccatatatgaatgaagagcaggagaagaaa
attaagcatagtatcctgacagggaactggaaagttcgcagctctctggataaagatcaa
atcaaggtggtaattaatgaggtgacgcggtggctggacctggctgaggaaggtgaccag
atgactctgcctggtattgctgggttccaggcctttgaggtgcagctggtgctgaggcag
gccctgcccaacatctggacagtgttgagagaccggggggtgatagtgaagaaggtgagc
cagcagcatcgctggtaccttgagcacgcctctggtgatcgagatagctgttggaaagag
cagattcttctctctgcaaggggtttttctgtctttttccagatgttggtgcaagcccag
aagcccttagtggggcataacatgatgatggatctactgcatctccatgagaagttcttc
agacccctcccagaaagctatgatcagtttaagcagaatatccacaatctatttcctgtt
cttattgacaccaagaatgttacaaaggatatctggaaggaactgcatttccctcgggtt
tccaacctcttggaagtatatgaagtgctgaacagtaacttgaatcccaccaaggattct
gcaccagtgattgttcatggaaacaaatgtgaaaaatatgccaagaaaaagtgcccccat
gaagcgggatatgatgccttcctgtgtgggtcagttcttttgaaagtggcacacctcctc
ctgcagagagtgcacggccatgttcccacgtctgagccctccttcccgcagtaccttgat
gtgctggctccttacgtgaaccaagtgaatcttatccgagcgggggtccctaaaattaac
ttctcgggcccggattttcccagtatccggcctcccatcctcatcctcactgtcaggaag
tggcctggggtgagtgagcagcaagtctacggcgagttccagaacctctgcaagttcgac
gtcagacggctcactcaaagccagttcctgctcctgaccaataagtttaaggatgtccgc
agtgtcctgaaggagtacaggtgtcacccgaccctgcaggtctccctgtaccggtactgg
agacactcccccaacgtcaactgcatgctacaagtctgcagtgtagttgctgcctgggcc
ttgcttggatttcttctgggaagatccagcccctga
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