Heterocephalus glaber (naked mole-rat): 101710088
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Entry
101710088 CDS
T02812
Symbol
Synpo2
Name
(RefSeq) synaptopodin 2
KO
K24066
synaptopodin-2
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101710088 (Synpo2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hgl04990
]
101710088 (Synpo2)
Domain-containing proteins not elsewhere classified [BR:
hgl04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
101710088 (Synpo2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
Calsarcin
PDZ_6
Motif
Other DBs
NCBI-GeneID:
101710088
NCBI-ProteinID:
XP_004870100
UniProt:
A0AAX6QB55
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Position
Un
AA seq
1266 aa
AA seq
DB search
MGTGDFICISMTGGAPWGFRLQGGREQKQPLQVAKIRSQSKASGSGLCEGDEVVSINGNL
CADLTYPEVIKLMESITDSLQMLIKRPSSEINEAVVSETENKNLEHLTQEGYVESTTLQI
RPATETQYREFSISLAKSGAPVAEDQRSGSDCAWSIKEEGGPSYQTAPQMLDSLEGSLTE
EVVSREKAEAGRLGTVVELQLSLPQDRHKDSSSPAVGLLRAKKPKSPDPDLCLQHEGAVL
INSIPADEKADLSLRSSKTLQVSSSREPRVIHGSGVAAGGLAQVEVILDCSDRQKTEGCR
LQAEKGCVASPGEGGQSEAPPSLVSFAVSSESTEQGEDPRWEKDHSRPHKHRARHSRLRR
SESLSEKQVKEAKSKCKSIALLLTDAPNPNSKGVLMFKKRRRRARKYTLVSYGTGELERE
ADEEEEEEGDKEATCEVAFLGTSESEVDEELLSDIENTQVVNFDWDSGLVDIEKKLNRED
KMEMLPDTTGKGALMFAKRRERMDQITAQREEERVAGAPGREVEIAQTDGLKTVTSYQRK
EEESMRMQTSVSKSYIHMGHSLGQVPQQNGFSGGSETAEAQRPMPMNRTAKPFPGSANQQ
AAPFSPTHNVPSPITDFPAPPPYSAVTPPPEAFSRGVSSPIAGPAQPPPWPQPAPWSQPA
FYDATERIASRDERIAVPAKRTGILQEAKRRSTTKPMFTFKEPKVSPNPELLSLLQNSEG
KRGTGAGGDSGPEEDYLSLGAEACNFMQSSSAKQKTPPPVAPKPAVKSSSSQPVTPVSPV
WSPGAAATQPPAFHTSNPSQGTVVSSIKIAQPSCPPARPASVLNLSGPFKGPQAAVASQN
YIPKPTAPIPTVSAAHAGAMGPSNELPGMSGKGAQLFAKRQSRMEKYVVDSNTVLAHTAR
AQSPTPSLPASWKYSSNIRAPPPVAYNPIHSPSYPLAAIKSQSSGPQASKVSKKKGKKPL
NALDVMKHQPYQLNASLFTFQPPDAKDGLPPKSSVKVNSAPAMKQALPSRPVNATSPTKV
QASSVYSVPAYTSQSTFFAEATSPVSASPVPVSVPTSPKQESTASSSYFAAPRPKFSAKK
SGITIQESGHSLSLPGKPVPPIISTTSPWVYQPAYNYFRKPADGLEKANRRPTPWEAAAK
SPLGLVDDAFKPRNIQESIVANVVSAARRKVLQGPPGHWNEKLSYVPQTQKVNMDLFERQ
EYHVTSVANNSMPTNFQYGSQLPYAYHRQASRNDSEIMSLETRSDYCLPIADCNYNPHPR
GWRHQT
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccggagatttcatctgcatttccatgactggaggggccccctggggcttccga
ttgcaaggtggccgggagcagaagcaacccttacaagttgcaaagattcgaagccagagc
aaagcctcagggtctgggctgtgtgagggggatgaggtggtgtctatcaatggcaacctg
tgtgcggacctcacctacccagaagtcatcaaactcatggaaagcatcacagactctctc
cagatgctcatcaaaagaccatccagtgaaataaatgaggctgtggtctctgaaactgaa
aacaaaaacctggagcatctcacacaggaggggtacgtggaaagtaccaccctgcagatt
cgaccagctacagagacccagtacagagaattctccatctccctggccaagagcggagct
cctgtagctgaggaccaaagaagtggttccgattgtgcctggagtataaaagaagaagga
ggccccagctatcaaacagctccccaaatgctcgactctctagagggatccttgacagaa
gaggttgtctcaagagaaaaggcagaagcagggaggctgggcactgtggtggagctacaa
ctgtcacttccacaggacagacacaaggactccagcagccctgctgtgggtctcctgaga
gctaaaaagccaaaatctcctgacccagacctgtgcttgcagcatgagggggctgtcctc
ataaattccatccctgctgatgagaaagcagacctttctctgaggtccagcaagacactc
caggtctccagcagcagagagccgagagtgatccatgggagtggagtagcagctgggggg
ctggcccaggtggaagtgatccttgattgctctgacaggcagaagactgaagggtgcagg
ctgcaggcagaaaaggggtgtgtggcttctccaggggaaggagggcagtccgaagcacct
ccttctctggtctcctttgccgtctcatcagaaagcacagagcagggggaagatccacgc
tgggaaaaagatcacagcagaccacacaagcacagagcgcggcactcacggctcaggagg
agtgaaagcctatcagaaaaacaagtgaaggaagcaaaatctaaatgcaaaagcattgcc
cttcttctcactgatgcccccaaccccaactccaagggggtgttgatgtttaagaagcgc
cggcggagggccaggaagtacaccctagtcagctacggtactggtgagcttgaacgagaa
gcagacgaagaggaggaggaggaaggtgacaaagaggctacatgtgaagtggcatttctc
ggcacaagtgagtcagaagtggatgaagagttgctgtctgacattgaaaacacccaagta
gtaaactttgactgggattctggactggtggacattgagaagaaactgaacagagaggat
aagatggagatgttgccagacaccacaggaaaaggagccctcatgtttgccaagaggagg
gagagaatggatcagatcacagcgcagagagaagaggagagggttgctggagcaccaggc
agagaggtggagattgcccagacagatggcctgaaaaccgtgacttcataccaaaggaag
gaagaggaatcgatgagaatgcagacctctgtgagcaaaagctacatccacatgggccat
agtcttggccaggtgccccaacagaatggcttcagtggaggatccgagacagcagaggcc
cagaggccaatgcctatgaacagaacggccaagcccttccctggctctgcaaaccagcaa
gcagctcccttctcgccgacccacaacgtcccaagtcccatcactgacttccctgctcct
ccaccttattctgcggtcactcctccacccgaagccttctccagaggggtatcaagtccc
attgctggcccagcacagccccctccctggcctcagcctgctccatggtcccagccagcc
ttttatgatgcaactgagaggatagcgtcccgggatgagaggattgcagtgccagcaaaa
agaacagggatattgcaagaagccaaaaggagaagcaccacaaaacccatgttcacattt
aaagagcccaaagtaagcccaaatcctgaactcttgtcacttcttcaaaattcagaaggc
aaacggggcactggagctggtggcgattccggacctgaagaagactacctcagcttagga
gcagaggcttgtaacttcatgcaaagctcctctgctaagcaaaagaccccacctcctgtt
gctccaaaacctgcagtcaagtcctcatcctcccaaccagttactccggtttctccagtc
tggtctccaggagcagctgcaacccaacctcctgccttccacacatcaaacccatcacag
ggcacggtggtctcctccatcaaaatagctcagccttcttgccctcctgcccggcctgca
agtgtgctgaacctgtctggtccctttaaaggaccacaagcagcagtagccagtcagaat
tacatccccaagccaacagcacccataccaacagtcagtgctgctcatgctggtgcaatg
ggaccatccaacgagcttcccggaatgagtgggaaaggagcccagctcttcgctaagagg
cagtcgagaatggagaagtatgtggtggattccaacactgtcctggcccacactgccagg
gctcagtctcccactccatccctaccagccagttggaagtattcctccaacatccgagcg
cctcctcctgtggcctacaatcctatccactctccctcctacccgctggctgccatcaag
tctcagtcatcaggcccacaggcctccaaagtgagcaagaaaaagggcaagaaacccctc
aatgctttggatgtcatgaagcaccagccatatcagctcaatgcatccttgtttactttc
cagcctccagatgcaaaggatggccttcccccaaagtcatcagtcaaggtcaattcagcc
cctgccatgaagcaagctcttccttccaggccagtgaatgccacctcacccacgaaggta
caggcttcgtctgtgtactcagtaccggcctacacctctcagtctaccttctttgcagag
gccacctccccagtcagtgcatccccagtgcctgtgagtgttcccacctctccaaagcaa
gagtccactgcctcgtcctcttattttgcggcaccaaggccaaagttctcagccaagaaa
agtggtatcacaatccaggagagtgggcactccctgtcccttcctggaaaaccagtccca
cccatcatttctacaacatctccttgggtataccagcctgcttataattacttccgcaaa
ccagcagatgggctggagaaagcaaacaggagaccaacaccttgggaagcagcagcaaag
tctcctcttggccttgtggatgatgctttcaaacccagaaacatccaagagtccattgtg
gcaaatgtggtctcagcagctcggaggaaggtgcttcaggggcccccaggacattggaat
gagaaactgtcctatgttcctcaaacacagaaggtcaatatggacttatttgaaaggcaa
gagtatcatgttacctccgtagctaataatagcatgcctaccaactttcagtatggttca
cagttgccatatgcatatcataggcaggcttctagaaatgattctgaaataatgtccttg
gagaccaggtctgattactgcctccccatagctgattgcaactataacccacaccccagg
ggatggagacaccaaacatga
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