Heterocephalus glaber (naked mole-rat): 101710889 Help Entry 101710889         CDS       T02812                                  Symbol Col6a1 Name (RefSeq) collagen type VI alpha 1 chain   KO K06238   collagen type VI alpha Organism hgl  Heterocephalus glaber (naked mole-rat) Pathway hgl04151   PI3K-Akt signaling pathway hgl04510   Focal adhesion hgl04512   ECM-receptor interaction hgl04518   Integrin signaling hgl04820   Cytoskeleton in muscle cells hgl04974   Protein digestion and absorption hgl05165   Human papillomavirus infection Brite KEGG Orthology (KO) [BR:hgl00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     101710889 (Col6a1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     101710889 (Col6a1)    04518 Integrin signaling     101710889 (Col6a1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     101710889 (Col6a1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     101710889 (Col6a1)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     101710889 (Col6a1)  09160 Human Diseases   09172 Infectious disease: viral    05165 Human papillomavirus infection     101710889 (Col6a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:hgl04147]     101710889 (Col6a1)    00536 Glycosaminoglycan binding proteins [BR:hgl00536]     101710889 (Col6a1) Exosome [BR:hgl04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    101710889 (Col6a1) Glycosaminoglycan binding proteins [BR:hgl00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    101710889 (Col6a1)  Hyaluronan   Extracellular matrix or blood plasma proteins    101710889 (Col6a1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  VWA Collagen VWA_2 VWA_3 FabMG Motif Other DBs NCBI-GeneID:  101710889 NCBI-ProteinID:  XP_004842591 UniProt:  A0AAX6SSK6 LinkDB All DBs Position Un AA seq 1027 aa AA seqDB search MRRAGILLSLLLQACWVATQDIQVTSKAITFQDCPADLFFVLDTSESVALRLKPYGALVD KVKDFTKRFVDSLRDRYYRCDRSLVWNAGALHYSDEVEIIRGLMRMPAGRGELKASVDAV KYFGKGTYTDCAVKKGLEELLVGGSHLKENKYLIVVTDGHPLEGYKEPCGGLEDALSEAK HLGVKVFSVAITPDHLEPRLSIIATDHTYRRNFTAADWGQSPDAEETITQTIDTIADMIK NNVEQVCCSFECQPARGPPGPQGDPGYEGERGKPGLPGEKGEAGDPGRPGDLGPVGYQGM KGEKGSRGEKGSRGPKGYKGEKGKRGIDGVDGMKGETGYPGLPGCKGSPGFDGIQGPPGP KGDAGPFGLKGEKGETGAAGEPGRPGSSGPSGDEGEPGEPGAPGEKGEAGSEGNAGPDGP PGEKGNPGERGPRGTPGVRGPRGDPGEAGPEGDQGREGPVGVPGDPGEAGALGPKGYRGD EGPPGPEGLRGAPGPAGPPGDPGLVGERGEDGHPGNGTEGFPGFPGYPGSRGPPGLNGTK GYPGLKGDEGEAGDPGEDNSDISPRGAKGAKGYRGPEGPQGPPGHVGPPGPDECEILDII MKMCSCCECKCGPIDILFVLDSSESIGLQNFEIAKDFIIKVIDRLSRDELVKFEPGQSYA GVVQYSHNQMQEHVDLRSPNIRNAQEFKEAVRKLQWMAGGTFTGEALQYTRDQLLPPSQN HRIALVITDGRSDTQRDTTSLSVLCGPNIQVLSVGIRDMFGFVAGSDQLNIISCQGLSPQ GRPGISLVKENYAELLEDAFLKNVTAQICKDKKCPDYTCPITFSSPADITIMLDGSASVG GHNFEVTKRFAKRLAERFLSAGREDPTVDVRVAVVQYSGPGQQRPGRPALQFLQNYTVLA STIDSMDFLNDATDVNDALSFVTRFYREASSGTTKKRVLLFSDGNSQGATAAAIEKAVQE AQRAGIEIFVVVVGRQVNEPHIRVLVTGKTAEYDVAFGERHLFRVPDYQALLRGAFSQSV SRKVALG NT seq 3084 nt NT seq  +upstreamnt  +downstreamnt atgaggcgggcaggcatcctgctgtccctgctgctgcaggcctgctgggtggccacgcaa gacatccaggtgacctcaaaggccatcaccttccaagactgcccggcggacctgttcttc gtgctggacacctctgagagcgtggctttgcggctgaagccctacggggcactggtggac aaagtcaaggacttcaccaagcgcttcgtcgacagcctgagggacaggtattaccgctgc gaccgcagcctggtgtggaatgcgggcgcgctgcactacagtgacgaggtggagatcatc cgcgggctcatgcgtatgcccgcaggccgcggtgaactcaaggccagcgtggacgctgtc aagtacttcggcaagggcacctacacggactgcgccgtcaagaaggggctggaggagctg ctggtggggggctcccacctcaaggagaacaagtacctgatcgtagtgaccgacgggcac cccctggagggctacaaggagccgtgcgggggcctggaggacgccctgagcgaggccaag cacctgggcgtgaaggtcttctcagtggccatcacccctgaccacctggagccacgcctg agcatcatcgccaccgaccacacctaccggcgcaacttcacggcggcagactgggggcag agccccgacgccgaggagaccatcacgcagaccatagacaccatcgcggacatgatcaaa aacaacgtggagcaggtgtgctgctccttcgagtgccagcccgccagaggacctccaggg ccccagggcgaccctgggtacgagggagaacgaggaaagccaggcctccccggagagaag ggggaagctggagaccccggacgacctggggacctcggacccgtcgggtaccagggcatg aagggagagaagggaagccgcggagagaagggctccaggggacccaagggctacaaggga gagaagggcaagcgtggcatcgatggggtggacggcatgaagggggagaccgggtaccca ggcctgccgggctgcaagggttcgccaggatttgatggcatccaaggaccccccgggccc aagggagatgctgggcccttcggactgaagggagaaaagggtgaaactggagccgctggg gagcctggaaggccagggagctcggggccatcgggagacgagggtgagcctggagagccc ggtgcccccggagagaagggagaggccggcagcgagggcaacgcgggacccgacggcccc ccgggagagaagggcaaccctggagagaggggaccgcgggggaccccaggcgtgcggggg cctcggggagacccgggtgaagctggaccggaaggtgaccagggacgagaaggccccgtc ggcgtccctggagacccgggtgaggccggtgcgctcggacctaaaggataccgaggtgat gaaggtccccccgggcctgagggtctcagaggagccccaggacccgccgggccgcctgga gaccccgggctggtgggcgagcggggagaagacgggcaccctggaaatggcactgagggc ttccccggcttcccgggctatccaggcagcaggggcccccctgggctgaacggcacaaaa ggctaccccggtctcaagggggatgagggcgaagctggggaccctggagaggacaacagc gacatttcaccccgcggggccaaaggggcaaaaggctaccgtggcccagagggcccccag ggtcccccaggccacgtgggaccacctgggccagatgagtgtgagattttggacatcatc atgaagatgtgctcctgctgtgagtgcaagtgcggccccatcgacatcctcttcgtgctg gacagctctgagagcatcggcctgcagaacttcgagatcgccaaggacttcatcatcaag gtcatcgaccggctgagcagggatgagctggtgaagttcgagccaggacagtcatacgcg ggcgtggtacagtacagccacaaccagatgcaggagcacgtggacctgcgaagcccgaac atccgcaatgcccaggagttcaaggaagccgtcaggaagctgcagtggatggcgggtggc acgttcacaggcgaggcgctgcagtacacgcgggaccagctgctaccgcccagccagaac caccgcatcgccctggtcatcaccgacggccgctcggacacccagcgggacaccacatcc ctcagtgtgctctgtggccccaacatccaggtgctgtccgtgggcatcagggatatgttt ggcttcgtggcgggctccgaccagctcaacatcatttcctgccaaggcctgtcgccccag ggccggccaggcatctccctggtgaaggagaactacgcggagctgctggaggacgccttc ctgaagaacgtcacggcccagatctgcaaagacaagaagtgtccggactacacctgcccg atcacgttctcctccccggccgacatcaccatcatgctggatggttcggccagtgtgggc ggccacaacttcgaagtcaccaagcgctttgccaagcgcctggctgagcgcttcctgtct gcgggccgggaggaccccacggtggacgtgcgggtggcagtggtgcagtacagtggccca ggccagcagaggccagggcggccggccctgcagttcctgcagaactacacagtgctggcc agcaccattgacagcatggacttcctcaacgacgccaccgatgtcaacgatgccctgagc ttcgtgacgcgcttctaccgagaggcctcctcaggcaccacgaagaagagggtgctgctg ttctcggacggcaactcgcagggggccacggcagcagccattgagaaggccgtgcaggag gcacagcgggcaggcatcgagatcttcgtggtggtggtggggcgccaggtgaacgagccc cacatccgcgtgctggtcaccggcaagactgctgagtacgacgtggcctttggcgagcgc cacctcttccgggtgcctgactaccaggccctgctccgcggtgccttctcccagagtgtc tccaggaaggtggcgctgggctag

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