KEGG   Heterocephalus glaber (naked mole-rat): 101711296
Entry
101711296         CDS       T02812                                 
Symbol
Kdm1b
Name
(RefSeq) lysine demethylase 1B
  KO
K19413  lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
hgl  Heterocephalus glaber (naked mole-rat)
Brite
KEGG Orthology (KO) [BR:hgl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hgl03036]
    101711296 (Kdm1b)
Chromosome and associated proteins [BR:hgl03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    101711296 (Kdm1b)
SSDB
Motif
Pfam: Amino_oxidase NAD_binding_8 zf-CW Thi4 SWIRM FAD_binding_3 Pyr_redox_2 Pyr_redox DAO HI0933_like FAD_oxidored Pyr_redox_3 Lycopene_cycl FAD_binding_2 GIDA NAD_binding_9 2-Hacid_dh_C AlaDh_PNT_C NAD_binding_7 zf-RING_2 PB2_627-dom Attractin YjeF_N IlvN TrkA_N
Other DBs
NCBI-GeneID: 101711296
NCBI-ProteinID: XP_012928612
LinkDB
Position
Un
AA seq 855 aa
MAAPRGRSKKRTAFDLTPDSLPLRSSGRQAKKKVTETIEEDEDGVSEKKYRKCEKAGCTA
ACPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYDKYTTWKKIWTSN
GKTEPSPKAFMADQQLPYWVQCTKPECRKWRQLTKEIQLTPQIAKTYRCGMKPNTMKPES
SDHCSLPEDLRVSEVSNHWWYSMLILPPLLKDSVAAPLLSAYYPDCVGMSPSCTSTNRAA
ASATTATTGDASPGRLEPSKVAPSVLVPGMNRYFQPFYQPNECGKALCVRPDVMELDELY
EFPEYSRDPTMYLALRNLILALWYTNCKEALTPQKCIPHIIVRGLVRIRCVQEVERILYF
MTRKGLINTGVLTVGADHYLLPKDYHNKSVIIVGAGPAGLAAARQLHNFGIKVTVLEAKD
RIGGRVWDDKSFKGVTVGRGPQIVNGCVNNPVALMCEQLGISMHKFGERCDLIQEGGRIT
DPTIDKRMDFHFNALLDVVSEWRKDKTQLQDVPLGEKIEEIYKAFIKESGIQFSELEGQV
LQFHLSNLEYACGSNLHQVSARSWDHNEFFAQFAGDHTLLTPGYSVIIEKLAEGLDIRLQ
SPVSIGHRVSVLEEQGQKRHQDPAVSHRESRRGQEAPCWLVEVALGGEIQELVAAVLVAV
PLAILQKGVIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPS
ASQRGLFAVYYDMDPQKQQSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKEQEVP
DPSKYFVTRWSTEPWIQMAYSFVKTFGSGEAYDIIAEEIQGTVFFAGEATNRHFPQTVTG
AYLSGVREASKIAAF
NT seq 2568 nt   +upstreamnt  +downstreamnt
atggcagcccctcggggaaggtcaaagaaaagaactgcgtttgatctaactccagatagc
cttcctttgaggagctccggtagacaggcaaagaagaaagtaacagagacgatagaggag
gatgaagatggtgtgtctgagaagaaataccgcaaatgtgaaaaggcaggctgtacagca
gcgtgtcctgtgtgcttcgcaagtgcttcagaaagatgtgccaaaaatggttacacatcc
cgatggtatcacctttcctgcggggaacatttctgcaacgagtgtttcgaccattactac
aggagccataaagatggatatgacaaatatactacatggaaaaaaatttggaccagcaac
ggcaaaacagaacccagccccaaagcattcatggccgaccagcagctcccttactgggtg
cagtgtacaaaacccgagtgtaggaaatggaggcagcttaccaaggaaatccagcttact
ccacagatagcaaagacttaccggtgtggtatgaaaccaaatactatgaagcccgagagc
tcagaccattgttccctgcccgaggacctgagagtgtcagaagtttccaaccactggtgg
tactccatgctcatcctgcctcctttgctgaaagacagtgtggcagcgcctctgctctcc
gcctactaccctgactgcgtgggcatgagcccctcctgtaccagcacaaaccgcgccgcc
gcctctgccaccacagccaccaccggtgatgccagcccggggaggctggagccctccaag
gtggccccttctgtgcttgttccaggcatgaatcggtacttccagcctttctaccagccc
aatgagtgtggcaaggccctgtgtgtgcggcccgatgtgatggagctggatgagctctat
gagtttcctgagtactcccgagaccccaccatgtacttggctctgcgaaacctcatcctc
gccctgtggtatacgaattgcaaagaagctcttactcctcagaaatgcattcctcacatc
atcgtccggggtcttgtgcgcattcggtgtgttcaggaagtggagaggatactttatttt
atgacgaggaaaggcctcatcaacacaggagttcttaccgtgggagccgaccattatctt
cttcccaaagactatcacaataaatcagtcatcattgttggggctggtccagcagggtta
gctgctgctaggcaactgcataactttggaattaaggtgactgtcctggaagccaaagac
agaatcggaggccgagtgtgggatgataaatcttttaaaggtgtcacggtgggaagagga
ccccagattgtcaatggctgtgttaataacccagtagcactaatgtgtgagcaacttggc
atcagcatgcataaatttggagaaagatgtgacttaattcaggaaggtggaagaataact
gaccccaccattgacaagcgcatggattttcattttaatgctctcttggatgttgtctct
gagtggaggaaggataagactcagctccaagatgtccctttaggagaaaagatagaggag
atctacaaagctttcattaaggaatccggcatccagttcagcgagctggaggggcaggtg
ctccagttccatctcagtaacctggaatacgcctgtggcagcaacctccaccaggtttcg
gctcgctcctgggatcacaatgaattcttcgctcagtttgctggtgaccacactctcctg
actcctgggtactctgtaatcattgagaaactggccgaagggcttgacattcggctccag
tctccggtgagcattggacacagggtctcggttcttgaggagcagggacagaagaggcac
caggatccagctgtcagccacagggagtcaagaagaggccaggaggcgccttgttggctg
gtggaggtggctctaggtggcgagattcaggagctggtagcagcagtattagttgctgtt
ccactggccatactacagaaaggtgtcattcagtttaatccaccactgtcagagaagaag
atgaaagctatcaacagcttgggcgctggcatcatcgagaagattgccttgcaatttccg
tacagattttgggacagcaaagttcaaggagctgacttttttggtcatgttcctcccagt
gccagccagcgcgggctctttgctgtatactatgacatggatccccagaagcagcagagc
gtgttgatgtcggtgattgctggggaggcagtggcgtcagttcggaccctggatgacaag
caggtgctgcagcagtgcatggccaccctgcgggagctgttcaaggagcaggaggtccca
gatccctcgaagtattttgtcactcgatggagcacagaaccatggatccagatggcatac
agttttgtgaagacatttgggagcggagaggcctatgatatcattgctgaagaaatacaa
ggaactgtcttttttgctggcgaggcaacaaacaggcattttccacaaactgttacagga
gcttatttgagtggtgttcgagaagcaagcaagatcgcagccttctga

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