Heterocephalus glaber (naked mole-rat): 101711814
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Entry
101711814 CDS
T02812
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl04622
RIG-I-like receptor signaling pathway
hgl05161
Hepatitis B
hgl05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
101711814
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
101711814
09172 Infectious disease: viral
05161 Hepatitis B
101711814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hgl03019
]
101711814
03041 Spliceosome [BR:
hgl03041
]
101711814
03036 Chromosome and associated proteins [BR:
hgl03036
]
101711814
Enzymes [BR:
hgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101711814
Messenger RNA biogenesis [BR:
hgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101711814
mRNA cycle factors
Common to processing body (P body) and stress granule
101711814
Spliceosome [BR:
hgl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101711814
Chromosome and associated proteins [BR:
hgl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101711814
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
101711814
NCBI-ProteinID:
XP_012923833
UniProt:
G5C4A6
LinkDB
All DBs
Position
Un
AA seq
652 aa
AA seq
DB search
MSHVTVGNTLGGVDKQFAGLDLNSSDHQSGAESTASKGLYKPPHLRNREASKGLYHKKSS
GWNCSEDKDVYSSFGSCDSRGKSSYFSDRGSGSRGRFDDRGQSDYGGVGSCDRTGFGKFE
SSGYSRWCDRSDEDDWSKPLPPSEHLEHELFSEGNTGINFEKYDDIPVEATGNNCPPHIE
NFSDVEMGEIIMGNIKLTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILS
QIYTHGPGEALKATKESRRYRQRKQYPISLVLAPTRELAVQIYKEARKFSYRSRVRPCVV
YGGADIGQQIRDLEHGCHLLVATPGRLEDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ
IRHIVEKYTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQRVV
WVEELEKRSFLLDLLGPTGKGSLTLVFVETKKGADSLEDFLHHEGYACTSIHGDRSQRDR
EEALQQFRSGKTPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRLGKLGL
ATSFFNERNAKIMKDLLDLLIEAKQEVPAWLENMAFEHRYKGSSRGCSKRFSGGLGARDY
RQSSGSSRSCFSSNRASSSHSGGGGHSNNRGFGGADYGGFYNSDGYGGNYNS
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtgacagtgggaaatacgctcggcggtgtagacaagcagtttgctggttta
gacctgaactcttctgatcatcagagtggggcagaaagcacagcaagcaaaggactttat
aaacctcctcatttaagaaacagagaggcatccaaagggctctaccacaagaaaagttca
ggatggaattgcagtgaagacaaggatgtgtatagcagttttggatcttgtgattcaaga
ggaaagtccagttacttcagtgatcgtggaagtggatcaaggggaagatttgatgatcgt
ggacagagtgactatggcggtgttggcagttgtgacagaactgggtttggcaaatttgaa
agtagcggatatagtcgttggtgtgacagatcagatgaagatgattggtcaaaacctctt
cctccaagtgagcacttagaacatgaactcttttcagaaggaaatactgggattaacttt
gagaaatatgacgatataccagtagaggcaactggcaataactgtcctccacatattgaa
aattttagcgatgttgagatgggagaaattatcatgggaaacattaaacttactcgttat
actcgtcctactccagtgcaaaaacacgcaattcctattatcaaagaaaaaagggactta
atggcttgtgctcaaacaggatctggaaaaactgcagcatttcttctgccaatcctgagt
caaatatatacacatggtccaggagaggctttaaaggctacaaaggaaagtagaaggtac
aggcagcgcaaacagtacccaatctccttggtgttagccccaaccagagagttggcagtg
cagatctacaaggaagccagaaaattttcataccgatctagagttcgtccttgtgtagtt
tatggtggtgctgatattggccaacagattcgagacttagaacatggttgccacttacta
gttgccactccaggacgtctggaggatatgatggaaagaggaaaaattggattagatttc
tgcaaatacttagtgttggatgaagctgacaggatgttggatatggggtttgaacctcag
ataagacatatagttgaaaaatatactatgccaccaaagggtgtccgtcacactatgatg
tttagtgctacttttcctaaggagatacagatgcttgctcgtgatttcttggatgaatac
atctttctggctgtaggcagagtaggctctacttctgagaacatcacacagcgagtggtt
tgggtggaagagttagagaaacggtcatttctacttgatctcttaggtccaactggaaag
ggttcactgactttagtgtttgtggagactaaaaagggtgcagattctctggaggatttc
ttacaccatgaagggtatgcttgtaccagtattcatggagaccgatcacaaagagatcga
gaggaagcacttcagcagttccgctcagggaaaaccccaattcttgtggccacagctgtg
gcagcaagaggtctagacatttcaaatgtgaaacatgttatcaactttgatttgccaagt
gacattgaggaatatgtgcatcgcattggccgtacaggacgtctaggaaagcttggcctt
gccacctcattctttaacgaaagaaatgcaaagattatgaaggatttattggatctactt
attgaagctaaacaagaagtgccagcttggttggaaaatatggcttttgaacaccgttac
aagggtagcagtcgtggatgttctaagagattcagtgggggacttggtgccagagattat
cgacaaagtagtggttccagcaggtcttgttttagtagtaatcgtgcaagcagcagccac
agtggtggaggtggtcacagcaataacagaggatttggtggagctgactatggaggcttc
tacaatagtgatggatatggtggaaattataactcctag
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