Heterocephalus glaber (naked mole-rat): 101711832
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Entry
101711832 CDS
T02812
Symbol
Ddx46
Name
(RefSeq) DEAD-box helicase 46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101711832 (Ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hgl03041
]
101711832 (Ddx46)
Enzymes [BR:
hgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101711832 (Ddx46)
Spliceosome [BR:
hgl03041
]
Complex A
U2 snRNP components
U2 related factors
101711832 (Ddx46)
Complex B
101711832 (Ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
101711832
NCBI-ProteinID:
XP_004836282
UniProt:
A0AAX6NSZ2
LinkDB
All DBs
Position
Un
AA seq
1032 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKAENRSRS
KEKTEGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNDMEGEELDPLDAYMEEVKEEVK
KFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGTVVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
PTAGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTILAPTVSAKTIAEQ
LAEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRIS
EYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNS
YQPTNKGRYKVL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtcgcgccactatcggaaacgatcagcatcaaggggacgctctggaagt
cgatctagaagtcgctcaccctcagataaaagaagtaaacgtggagatgacagacggtct
agaagtagagatagagatagaaggagagaaaggtcaagaagcagggataaaagaagatct
cggtcaagggacaggaagcgtctgaggcgttccagaagtagagagagagacagaagccga
gagcgaagaagatctcgcagccgagacaggagacgctcaaggagtagaagccggggccga
agatcccgatcctccagtcctggcaataaaagcaagaaagctgagaatagatctaggtcc
aaggagaaaacagaaggtggagaaagttctaaagagaagaaaaaagacaaagatgataag
gaagatgaaaaagaaaaagatgctggtaactttgaccagaataagctggaggaagaaatg
agaaagcgaaaagaaagagttgaaaaatggagagaagagcaacgtaaaaaggccatggaa
aacataggagaactgaaaaaggaaattgaagagatgaaacaagggaaaaaatggagttta
gaagatgatgatgatgatgaagacgatcctgcagaagctgaaaaggaaggaaatgacatg
gagggtgaggagttagatccattagatgcttacatggaagaagtgaaagaagaagtaaaa
aagtttaatatgagaagtgtaaaaggtggtgggggaaatgaaaagaagtcggggccaaca
gtcacaaaagttgtcactgttgtgactaccaaaaaagcagttgtagattctgacaagaag
aaaggtgagctgatggagaatgaccaggatgccatggagtattcttcagaggaggaagaa
gttgatcttcagacagcccttacaggctatcagacaaaacagagaaaacttctagaacca
gttgatcatggaaaaattgaatatgaaccattcagaaaaaacttttacgttgaagttcca
gaactagcaaaaatgtctcaagaggaggtgaatgtatttcggttggaaatggaaggcatt
acagtaaaaggaaaaggttgtcccaaaccaattaaatcttgggtccagtgtggaatttcc
atgaagatcttaaattctctcaaaaagcatggttatgagaagcccacgccaatccaaacc
caagcaattcctgcgataatgtctggacgagatttgattggtattgccaagacaggaagt
ggaaagaccattgcttttctgttgcccatgtttagacacatcatggatcagaggtcatta
gaagaaggagagggcccaatagctgtcatcatgactccaactcgagaactggctttacag
attactaaagaatgtaagaagttttcgaagaccctaggacttagagtggtctgtgtttat
ggaggaacaggaatcagtgagcagattgctgaactgaaaagaggtgctgaaattattgtt
tgcacacctggtcgaatgattgacatgttagcagctaacagtggtcgggtcacaaatctt
cgaagagtgacatatgtcgttttagatgaagcagatagaatgtttgacatgggatttgaa
ccacaggtcatgcgcattgtggataatgtccgtcctgaccgacagacagttatgttttca
gctactttccctagagctatggaggccttggcacgcagaatactgagtaaacccattgaa
gtacaggttggaggcaggagtgtggtttgttcagatgtggagcaacaggtgattgtgatt
gaagaagaaaaaaagttcttaaagttacttgagcttctaggtcattatcaagaatcagga
tctgtcattatatttgtggataagcaggaacatgctgatggtctgctaaaggacttaatg
agagcgtcttatccttgcatgtctcttcatggaggtattgatcaatatgacagagatagc
atcataaatgactttaagaatggaacctgcaagcttcttgtggccacctcagttgctgcc
cgaggtctagatgtgaaacatctgattcttgtagtaaattacagctgccccaaccactat
gaggactatgtacacagagcaggacggactggaagagcaggcaacaaaggttatgcctac
acttttatcacagaggatcaagctcgctatgctggtgacataattaaagctcttgaattg
tcagggactgtggtgcctcctgatctagagaaactttggagtgatttcaaagatcagcag
aaagctgaaggaaaaataattaaaaagagtagtgggttctctggtaagggattcaagttt
gatgaaacagaacaagctttggctaatgagaggaagaagttacagaaggcagctcttggt
ctgcaagattcggatgatgaagatgctgcagttgatattgatgaacaaattgaaagcatg
tttaattcaaagaagagagtaaaggatatggctgctcctggaacatctagtgttcctgcc
ccaactgcaggaaatgccgaaaaattagaaattgctaagcgattggctctcagaatcaat
gctcagaagaatttgggcattgagtctcaggtagatgtgatgcaacaggccaccaatgca
attctcagaggtggcactattctggctcccactgtgtctgcaaaaaccattgcagagcaa
cttgctgaaaagatcaatgccaagctcaattatgtgcctttagaaaaacaagaagaggag
agacaggatggtggacagaatgaatcttttaagagatacgaggaagaattagagattaat
gacttcccacagacggcgaggtggaaagttacctctaaggaagctctacagagaatcagt
gaatattccgaagctgctattacaatcagaggaacttacttccctcctggcaaagaaccc
aaggaaggagaacggaaaatttacttggcaattgaaagtgctaatgaactggctgtgcag
aaagcaaaagcagaaatcaccaggctcataaaagaagaattgatccgactgcaaaattca
taccagccgacaaataaaggaagatacaaagtcttataa
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