Heterocephalus glaber (naked mole-rat): 101712293
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Entry
101712293 CDS
T02812
Symbol
Ercc6
Name
(RefSeq) ERCC excision repair 6, chromatin remodeling factor
KO
K10841
DNA excision repair protein ERCC-6
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
101712293 (Ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hgl03036
]
101712293 (Ercc6)
03400 DNA repair and recombination proteins [BR:
hgl03400
]
101712293 (Ercc6)
Chromosome and associated proteins [BR:
hgl03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
101712293 (Ercc6)
DNA repair and recombination proteins [BR:
hgl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
101712293 (Ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
DUF5365
EccE
Motif
Other DBs
NCBI-GeneID:
101712293
NCBI-ProteinID:
XP_004874585
UniProt:
A0AAX6QRH7
LinkDB
All DBs
Position
Un
AA seq
1482 aa
AA seq
DB search
MPSEGSRHSCQTQEQEHSQSPPVRADEDTTGEQEHGGAVEVGKQLASPPSDCGPSTSAEG
CTSAAMRRGPTLVHIDRHQIPAVERNAQALELQGLGVDVYDQTVLEQGVLQQVDSALHEA
SRAAQLADAEKEYQSVLDDLMSCMTSLRQINKIIEQLSPQAATNRDINRKLDSVKRQKYN
KEQQLKKITVKQKRLQAVLGRAEVRVELEHAGGLEEEDAEPGPSCLGIMLMPAQKTAWEE
LIRTGQMTPFGTQVLQKTEKKPRKLMLNEASGFEKYLADQARLSFERKKQAANKRTSRKA
AASVKPASNAQSKENKPKQRSQILSKTDWRLKKHIRKLQKKALQFQGKVGLPRGKRSLGA
EARLQAMGNSESEEPRSFPMEGEEEGDGEEVGADLSGDGADCELRPELRGQKRQKKVPAQ
ENDDDFSPSSGEEAEATERGRGTGRKVVRCCDDGDEDYYKQRLRRWTKLRLQNKEKHLKL
EDDSEESDAEFDEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQI
IAFLAGLSYSKIRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPSFRVAILHETGS
CTHRKENLIRDIAHCHGILITSYSYIRLMQDDFSRQNWHYVILDEGHKIRNPNAAVTLAC
KQFRTPHRIILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYANASPV
QVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFINS
KEVYKILNGEMQLFSGIVALRKICNHPDLFSGGPKNLGGLPDDELEEDQFGYWKRSGKMI
VVESLLKIWHKQGQRVLLFSQSRQMLHILEVFLRAQKYSYLKMDGTTTIASRQPLIARYN
EDASIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKRQVTVYRL
LMAGTIEEKIYHRQIFKQFLTNRVLKDPKPRRFFKSNDLYELFTLTSPNGSQSTETSAIF
AGIGSDVPTPKRHLKRKILPAFGTDRDVPKCKKFPDSNTLANVATSSEHKSKATRAEGIM
VTSSPSNRLKTDPHPGGRVTSSDRVSEGTSAASGPEEPPVTSGNGDCSDCPRIGGALLLS
GEENIAAKQGPSDEGDSGLVPAEPPRENEQVGSHSYKHKSKRKHQGVAEEGTLEKRQKHE
STRHRRDAKFEGTRVPHLVKRRRYHRHDLGPDSKARVHSGDDYVLEKLFKKSVGVHSVVK
HDAIMDGASPDYVLVEAEANRVAQDALKALRLSRQQCLGAASGVPTWTGHRGARVKSRFG
QKRNSNLSVHRPSSSSTEECQQDGLVKREGKDHMSEHFSGKAEDTDSSSGALTSSSLLAR
MRARNHLILPERLESENGHVAEVSAPPSCATEHDELLVDMRNFIAFQARVDGQASTRELL
QEFEPKLSASQSCVFRELLRNLCTFHRTPGGEGVWRLRPEYC
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atgccaagtgaagggagccgccactcctgtcaaactcaggagcaggagcattcacagagt
ccgcctgtcagagctgatgaagatacaactggggagcaggagcatggaggtgctgtggag
gtggggaagcaactggcctctcctccctctgactgtgggccgtccacctctgccgagggg
tgcacatcagcagccatgaggagaggcccgaccctggtgcacatcgacagacatcagatc
cccgcagtggagcggaatgcacaggccctagagctgcagggcctgggtgtggacgtctat
gaccagaccgtgctggagcagggtgtgcttcagcaggtggacagcgccctgcacgaggcc
agtcgagcagcccagcttgcagatgctgagaaggagtaccagtctgtcttggatgacctc
atgtcatgtatgacatctctgaggcaaatcaataaaattattgaacaacttagccctcaa
gctgctaccaacagagacatcaacaggaaactagattctgtaaaacgacagaaatataat
aaggaacagcaactgaagaagatcactgtgaagcagaagcgcctccaggctgtccttggc
agagcagaggtgagagtggagctggagcacgctggtggcctggaggaggaggatgcagaa
ccgggcccgtcctgtcttggcatcatgctcatgcctgcccagaagaccgcctgggaggag
ctcattcgcaccggccagatgacaccatttggtacccaggtccttcagaaaacagagaaa
aagcctagaaaactaatgctcaatgaggcgtcaggcttcgagaagtatttggcagatcaa
gcgagactgtcatttgaaaggaagaagcaagctgctaataaaagaacatccagaaaagct
gcagcctcagtcaagcctgcctcaaatgcacagtcaaaagaaaacaaaccaaagcagaga
agccagattctctccaaaacagactggcgcttgaagaagcacatcaggaagctccagaag
aaggcgctgcagttccaggggaaagtggggcttcccagggggaagaggtccctaggggct
gaggcgaggttgcaggcaatgggaaactctgagagtgaggagcccaggtccttccccatg
gagggggaggaagagggagatggggaggaggtaggggctgacctgtctggagatggcgca
gactgtgagctgaggcctgagctcaggggccaaaaacgccagaagaaagtcccagcgcag
gagaatgatgacgacttttctccaagttctggggaagaagcagaagccactgaaagaggc
cgaggaacaggtcgaaaagtagtgaggtgctgcgacgatggagatgaagattattataag
cagcggttaaggagatggactaaacttagattgcagaacaaagagaaacacctgaagctt
gaagacgactcagaggagagtgatgcggaatttgatgaaggttttaaagtaccaggtttt
ctgttcaaaaagctctttaagtaccagcagacaggtgttaggtggctgtgggaattgcac
tgccagcaggcaggaggaattctgggagacgagatgggattgggcaagaccatccagata
attgccttcttggcaggtctgagctacagcaagatcaggactcgtggttcaaattacagg
ttcgagggactgggccccactattattgtctgcccaacaacagtgatgcatcagtgggtg
aaggagtttcacacgtggtggccttccttcagagtggcgattctgcatgaaactggctcc
tgtacccacagaaaggagaatctgattcgagacattgcccattgtcatggcattttgatc
acctcctactcctacattcggctgatgcaggatgactttagcaggcagaactggcactat
gtgatcttggatgaaggacacaaaattcgaaaccccaatgctgctgtcaccctggcttgc
aagcagttccgcacacctcaccggatcatcttgtcaggctcgccgatgcagaataacctc
cgagagctgtggtcgctctttgactttgtcttcccgggaaagttgggcaccttgcccgtg
tttatggagcagttctctgtccccatcaccatggggggatatgccaatgcttctcctgtg
caggttaaaactgcttacaaatgtgcatgtgtcttacgagacaccataaacccatacctg
ctgcggagaatgaagtcagacgtcaagatgagcctttctttgccagataaaaacgaacag
gtcttattttgccgtcttacagatgagcagcataaagtctaccagaatttcatcaattcc
aaagaagtttacaagattctcaatggagagatgcagcttttctctggaattgtagctcta
agaaaaatctgcaaccaccctgatctcttttctggaggccccaagaatctcggtggtctt
ccagatgatgaactagaagaggatcagtttggatactggaagcgttctgggaagatgatt
gtcgttgagtctttgctgaaaatatggcacaaacagggtcagcgagtactgctgttttct
cagtcgagacagatgctgcacatcctcgaagtgttcctgagagcccagaagtactcctat
ctcaagatggacggcaccactaccatcgcctctcgccagcctctgattgcaagatacaac
gaggatgcatccatctttgtgtttcttctgaccacgcgggtaggcggcataggtgtcaat
ctgaccggggccaacagagtaatcatctacgaccctgactggaacccgagcactgacaca
caggcccgggagcgagcctggaggataggccagaagaggcaggtcactgtgtaccggctc
ctgatggctggcactatcgaggaaaagatttaccaccgacaaatcttcaagcaatttttg
acaaacagagtgctaaaagatccaaagccaaggcggtttttcaaatccaatgacctttat
gagctatttactctgactagccctaatggctcccagagcactgaaacaagtgctattttt
gcaggaattggttcagatgttccaacacccaaacgccatttaaaaaggaagattctgcca
gcctttgggacagaccgggatgttccaaaatgcaagaagttcccagattctaacacactt
gcaaatgtggccacgtcatctgaacataaatctaaggcaacaagagctgaaggaatcatg
gtaacttccagtccaagtaaccgtttgaaaactgaccctcacccgggtggcagggtaact
agcagtgacagggttagtgaggggacaagtgcagcgtctggaccagaggagccaccagtg
accagtggaaatggagactgttctgattgcccacgaattggcggagctctcctcctgtct
ggtgaagaaaacattgctgcgaagcaggggccttctgatgaaggagacagcggcctggtt
ccagcagaacctcctcgggagaatgaacaggtgggaagtcattcctataagcacaagtcg
aaaaggaagcatcagggtgtggcggaagaggggacgctggagaagcggcagaagcacgag
agcaccaggcaccgcagagatgccaagttcgagggcacacgagtgccgcacctggtgaag
agaaggcggtaccacaggcatgatctgggccccgacagcaaggccagggtgcacagtggt
gacgactatgttctagaaaagctcttcaagaaatcagtgggcgtgcacagcgttgtgaag
catgatgccatcatggacggtgccagcccggactacgtgctggtggaggcagaagccaac
cgagtggcacaggacgccctgaaagccctgcggctgtcccgtcagcagtgtctaggtgct
gcgtctggtgttcccacctggactggccacaggggcgccagagtgaagagtagatttggt
cagaaaaggaactctaacctctctgtgcatcgtccttcatcctcttcaacagaagaatgc
cagcaggatggtttggtgaaaagggaaggaaaagaccacatgtcggagcacttcagtgga
aaagctgaggacacagactcttcctccggggccctcacctcttcctccctcttggccagg
atgagagcaagaaaccacctgatcctccctgagcgcttggagagtgaaaatgggcacgtg
gcagaggtgtctgcaccgccatcctgcgccacggagcacgatgagctactggtggacatg
aggaacttcattgctttccaggcccgtgtggatggccaggccagcacccgagagctccta
caggagttcgagcccaagctgtctgcatcacagtcctgtgtcttccgggagctgctgagg
aacctgtgcacctttcacaggacaccaggcggggaaggagtgtggagactcaggccagag
tactgctga
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integrated database retrieval system
