KEGG   Heterocephalus glaber (naked mole-rat): 101712310
Entry
101712310         CDS       T02812                                 
Symbol
Tdp1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
hgl  Heterocephalus glaber (naked mole-rat)
Pathway
hgl03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hgl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    101712310 (Tdp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hgl03400]
    101712310 (Tdp1)
DNA repair and recombination proteins [BR:hgl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     101712310 (Tdp1)
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL
Other DBs
NCBI-GeneID: 101712310
NCBI-ProteinID: XP_087051589
LinkDB
Position
Unknown
AA seq 666 aa
MSQEGNYGRWTISSSEESEDEKPEPDKPSTSSVPCAGQGAVKELSYTCSEARKAAHRRQI
SPVKFSNADSVSPAKKQRSSSQEDLGWCLSSSDDEREPETQQKQAEHVVVKEEKDIPSPK
DGAPQRTGNHGPPASHRLKEEEDDYETSGEGQDIWDMLDKGNPFQFYLTRVSGIKPKYNS
KALHIKDILSPLFGTLVSSAQFNYCFDVDWLVKQYPPEFRKKPILLVHGDKREAKAHLHA
QAKPYANISLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNIIREDWHQKTQGIWLSP
LYPRIDHGTQGSGESKTHFKADLISYLTAYNAPPLQEWIDTIQEHDLSETNVYLIGSTPG
RFQGSQKDNWGHFRLRKLLKEHGTSIPKAECWPLVGQFSSIGSLGADESKWLCSEFKESL
LTQGAENKTPGKSSIPLHLIYPSVENVRTSLEGYPAGGSLPYSIQTAEKQNWLHSYFHKW
LADTSGRSNAMPHIKTYMRLSPNSSRIAWFLVTSANLSKAAWGVLEKNGTQLMIRSYELG
VLFLPSAFGLASFKVKQKFSSGSQELAPPFPVPYDLPPELYGSKEELRSSLSLGMAAVLI
RGALVSPLIVASWLQCRSLSLVAQTLHPTCAGFLASTTGLWACPVQILDTDLHETLPWPL
RLWVHS
NT seq 2001 nt   +upstreamnt  +downstreamnt
atgtctcaggaaggcaattatgggagatggacaatatccagtagtgaggagagtgaggat
gaaaagcccgaaccagacaagccctctacctcttccgtcccctgtgctgggcagggagca
gtgaaggagctgagctatacctgctccgaggctcgtaaggctgcacacaggaggcagatc
tcaccagtgaaattcagcaacgcagattcggtttcacctgccaaaaagcagagaagtagt
tcccaggaagacctcggctggtgtctctccagcagtgatgatgagcgcgaaccagaaacg
cagcaaaagcaggctgagcacgtggtggtcaaagaggaaaaagatatcccctctcccaaa
gatggtgctcctcaaagaactggaaatcatggcccccctgccagccataggctaaaagag
gaggaagatgattatgagacgtcaggagaaggccaggacatttgggacatgttggataaa
ggaaaccccttccaattctacctcactagagtctcaggaattaagccgaaatataactcc
aaagccctccatatcaaagatattttatctcctctatttgggacacttgtttcctcagct
cagtttaactactgctttgacgtggactggcttgtaaaacagtatccaccagaattcaga
aagaaaccaatcctgcttgtacatggcgataaacgagaagctaaggcccatttgcatgcc
caggcaaagccttatgccaacatttccctgtgccaggcgaagttggatattgcatttgga
acacaccacactaaaatgatgttactactgtatgaagaaggcctccgggtcgtcatccac
acctccaacatcatccgtgaagactggcaccagaaaacccaaggaatatggttgagcccc
ttgtatcctcgaattgaccatggaactcagggatctggagaatcaaaaacacattttaaa
gctgatctcatcagttacttgacggcttataatgctcctcctctccaggaatggatagat
accatccaggagcatgatctctctgaaacaaatgtttaccttattggctcaacccctgga
cgttttcaaggaagtcaaaaagataactggggacattttaggcttagaaagcttctgaaa
gaacatggcacatctataccgaaagccgaatgctggcccctagtgggtcagttctcaagc
attggctcactgggggctgatgaatcaaaatggttatgttcagagtttaaggagagcttg
ctgacacagggggcggaaaacaaaactccagggaaaagctctattcctcttcatttgatc
tacccttctgtggaaaatgtgcggaccagcttagaaggatatccagctgggggctctctt
ccctatagtatccagacagctgagaaacagaattggctacattcctactttcacaagtgg
ttggctgatacgtctggccgcagcaatgccatgccgcacatcaagacttacatgaggctc
tctccaaactccagcagaatcgcctggttccttgtcacaagtgcaaacctgtccaaggcc
gcatggggagtgctggagaagaacggcacccagctgatgatccgttcctacgagctcggg
gtccttttcctcccttcagcatttggcctggccagcttcaaggtgaagcagaaattctcc
tctggcagccaggagcttgcacctcccttccctgtgccatacgacctgcctccggaacta
tacggaagtaaagaggagctcaggtcctcgctgtcgctggggatggctgctgttctcatc
cggggagctctggtctcccccttgatcgttgcttcctggctccagtgcagatccctcagc
ctggtggcacagacccttcaccccacctgcgcgggctttctggcttccaccactggcctt
tgggcctgcccagtgcagatcctcgatacggacttgcatgagacattgccttggcctcta
cgcctctgggtgcactcatag

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