Heterocephalus glaber (naked mole-rat): 101713904
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Entry
101713904 CDS
T02812
Symbol
Cnot1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101713904 (Cnot1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hgl03019
]
101713904 (Cnot1)
Messenger RNA biogenesis [BR:
hgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101713904 (Cnot1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101713904 (Cnot1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
101713904
NCBI-ProteinID:
XP_012927042
LinkDB
All DBs
Position
Un
AA seq
2383 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCSSIEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDFIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFNFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTGALGLPAVNSDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVNTLVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
AHHMMRNLTAGMAMITCREPLLMSISTNLKSSFASALRTASPQQREMMDQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELE
QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVSHVTEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRA
QAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGV
LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG
FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYK
GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD
MLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQ
LINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
AFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttactacgctgcctattctcacatgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccatcagactcagtttctgattcaggagtgtgcgtcg
ctgattacaaagccaaattttatctcaacgttgtcctatgccattgataatccattgcac
tatcagaagagtttaaagcctgcaccccacttatttgcccagctgagtaaagttcttaag
ttaagcaaagtacaagaggtaatttttggtcttgcccttttgaattcttccagttcagat
ctcagaggttttgctgctcagtttattaaacagaagcttccggatcttctgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatatagcaatagaggtc
ctacacctcctcctctcccatctcctctttgggcagaagggagcctttggagttggacag
gaacagatagacgcttttcttaagacgctgcgcagagattttccccaagaacgctgtcct
gtggtgcttgcaccacttttatatcctgaaaaacgggacattctaatggacaggatcctg
cctgattccggaggggtagctaaaaccatgatggagagctctttagctgatttcatgcaa
gaagtaggctatggcttttgttcaagtatcgaagaatgtcgcaatataatcatgcagttt
ggcgttcgggaagttacagctgcccaggttgcaagggttttgggaatgatggctcgaact
cattcaggattaacagatggtattccattacagagtatctctgctcctggcagtgggatc
tggagtgatggaaaagataaaagcgatggcgcacaggcacacacgtggaatgtagaagtc
ttgattgatgttctcaaagaactcaacccgagtttgaatttcaaggaagtgacttatgaa
ttggaccatcctggatttcaaattcgtgatagtaaaggacttcacaatgttgtttatggt
attcaaaggggtttgggtatggaagtgttcccagtagacttcatctatagaccttggaaa
catgcagaaggccagctctccttcattcaacattcccttataaatccagaaatcttctgt
tttgctgactatccttgtcatactgttgccactgatattctgaaagcaccaccagaggat
gacaatcgagaaattgccacatggaagagcttggatttaattgaatctctgctgaggctt
gcagaggttggacagtatgagcaagtcaaacagctcttcaacttccctatcaaacactgt
ccagacatgctggtattggccttactacaaatcaacacctcctggcataccttgcgccat
gaactcatttccactctgatgccaatctttcttggaaaccatcctaactctgctattatt
ttgcactatgcatggcatgggcagggacagtctccctcaattcgccagcttatcatgcat
gcaatggcagaatggtacatgagaggggagcaatatgaccaggccaagttgtctcgaata
cttgatgtggctcaggacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgatcttgctgcacttgcttctcgtcgtgaatacctcaaacttgacaagtgg
ctcacagataaaattcgagagcatggggagccttttatacaagcgtgcatgactttttta
aagagacgatgcccttctattttgggtggacttgccccagagaaagaccaacccaaaagt
gctcagcttcctcctgaaactctggcaacaatgttggcttgtctacaggcttgtgcaggg
agtgtttctcaggagttatcagagaccatcctcaccatggttgccaattgcagtaatgtt
atgaataaggccagacagccaccgcctggagttatgccaaaaggacgccctcctagtgct
agcagcttagatgccatttctcctgttcagattgaccctcttgctggaatggcatcgctt
agtataggtggctcagctgcccctcacacacagagcatgcaaggtttccctccaaatttg
ggttctgcgttcagtacccctcagtcaccagcaaaagcatttccacctctatcaacccca
aatcaaaccactgcattcagcggtattggaggactttcatcacagcttccagtaggtggt
cttggcacaggcagcctgactggtataggaaccggggctcttggactccctgcagtgaat
agcgacccttttgtacagaggaaactgggcacctctggactgaaccagcctacattccag
cagagtaagatgaaaccttcggacttgtctcaggtgtggccagaggcaaatcagcacttt
agtaaagagatagatgatgaagcaaatagctatttccagcgaatatataatcacccacca
catccaactatgtctgttgatgaggtattagaaatgctacagagatttaaagactccact
ataaaaagggaaagagaagtatttaactgtatgctaaggaatttgtttgaagaataccgg
tttttcccccagtaccctgataaagagttacatataacagcctgcctttttggtggcata
attgagaaaggactggtcacttacatggcactgggtctagccctgcgatacgtccttgaa
gccttacgcaagccttttggatccaaaatgtattatttcgggattgctgcactagataga
tttaaaaatagattgaaggactacccccagtattgtcagcacttggcttctatcagtcac
tttatgcagtttccacatcatttacaggagtatatcgagtatggacagcagtctagagac
cctcctgtgaagatgcagggctctatcacaactcctggaagtattgcactggctcaggcc
caggctcaggcccaggttccagcaaaagcacctcttgctggtcaggttaacactctggta
accacctcaacaactaccactgttgctaaaacggtcacagtcaccaggccaactggagtc
agcttcaagaaagatgtgccaccttctatcaataccacaaatatagatactctacttgtg
gccacagatcaaactgagagaattgtggagcccccagaaaatatccaagaaaaaattgct
tttattttcaacaatctctcacagtcaaatatgacacaaaaggttgaagagctgaaagaa
actgtaaaggaagagtttatgccttgggtttcacagtatctagttatgaagagggtcagc
attgagccaaacttccacagcctgtattcaaacttccttgacacactgaagaaccctgaa
tttaacaagatggttctgaacgagacttacagaaacatcaaagtgctcctgacctctgat
aaagctgcagccaatttttcagatcgttctttgctgaagaacttgggacattggctagga
atgatcacattagctaaaaataaacccatcctgcacactgacttggatgtgaagtctttg
ctgctagaagcttatgttaaaggacaacaagagttgctctatgtagtgccctttgttgcc
aaagtcttagagtctagtattcgtagtgtggttttcaggccaccaaacccctggacaatg
gcaattatgaatgtattagctgagttgcatcaggaacatgatttaaagttaaatttgaag
tttgagatcgaggtcctctgtaagaaccttgcattggatatcaatgagctaaaacctgga
aaccttctaaaggataaagatcgcctaaagaacttagatgaacaactctctgcaccaaaa
aaagatgtcaagcagccagaagaacttcctcccatcacaaccacaacaacttctacaact
ccagcaaccagcactacctgtacagccacggttccaccacagccgcagtacagctaccat
gacatcaatgtgtattcccttgcaggcctggcaccacacataacactaaacccaacaatt
cctttgtttcaggcccatcctcagttgaagcaatgtgttcgtcaagcaattgaacgggct
gtccaggagctggtccatcctgtggtggatcggtcgattaagattgctatgactacttgt
gaacaaatagtcaggaaggattttgccctggattctgaggaatcgagaatgcgaatagca
gctcatcacatgatgcgtaacttgacagctggcatggctatgattacctgcagggaacct
ttgctgatgagcatctctaccaacctcaaaagcagttttgcctcagcccttcgtactgca
tccccacagcaaagggaaatgatggatcaggcagctgctcagttagctcaggacaattgt
gaattagcttgctgttttattcaaaagactgccgtagaaaaagcaggccctgaaatggac
aagagattagcaactgaatttgagctgagaaaacatgctaggcaagaaggacgccgatac
tgtgatcctgttgtattaacataccaagctgagcggatgccagagcaaatcaggctgaaa
gttggtggtgtggacccaaagcagctggctgtttatgaagagtttgcacgcaatgtgcct
ggcttcttgcccacgaatgacttaagtcagcctacaggatttttagctcagcccatgaag
caagcttgggcaacagatgatgtagctcagatttatgataagtgcattacagaactggag
cagcacctacatgccattccaccaactttagccatgaaccctcaagctcaggctcttcga
agtcttttggaagttgtagtattatctcgaaactctcgggatgccatagctgctcttgga
ttactccagaaggcagtagaagggttattagatgccacaagtggtgctgatgctgaccta
ctgctgcgctacagggagtgccacctcttggtactaaaagctctgcaagatggcagggca
tatggatctccatggtgcaacaaacagatcacaaggtgcctaattgaatgtcgagatgaa
tataaatataatgtggaggctgtggagttgctaattcgcaatcatttggttaacatgcag
cagtatgatcttcatctagctcagtcaatggaaaatggtttaaactacatggctgtggca
tttgctatgcagttggtaaaaatcctgctggtggatgaaaggagtgtttcccacgttact
gaggcagatctgttccacaccattgaaaccctcatgaggattaatgctcactccagaggc
aatgctccagaaggattgccccagctgatggaagtagtgcgatccaactatgaagcaatg
attgatcgtgctcatggaggccctaattttatgatgcattctgggatctctcaagcctca
gagtatgatgaccctccaggcctgagggagaaggcagagtatcttctgagggaatgggtg
aatctctaccattcagcagcagctggccgtgacagtaccaaagctttctctgcgtttgtt
ggacaggtagagcttttggaaagaaagatgcaccagcaaggaatactgaagactgatgac
ctcataacaagattctttcgtctatgtactgaaatgtgtgttgaaatcagttaccgtgct
caggctgagcagcagcacaatcctgctgctaatcccactatgatccgagccaagtgctat
cacaacctggatgcctttgtccgactcattgcactgctagtgaagcactcaggggaggct
accaacactgtcacaaagattaatctgctgaacaaggtccttggtatagtagtgggagtt
ctcctacaggatcatgatgttcggcaaagtgaatttcagcagcttccctaccatcggatt
tttatcatgctgctcttagaactcaatgcacctgagcatgtgttggaaactattaatttt
cagacactcacagctttctgcaatacattccacatcttaaggcctaccaaagctcctggc
tttgtatatgcctggcttgaactgatctcccatcggatatttattgcaagaatgttggca
catacgccacagcagaagggatggcctatgtatgcgcagctactgattgatttattcaaa
tatttagcgcctttccttagaaatgtcgaactcaccaaacctatgcaaatcctctacaag
ggtaccctaagagtgctgctggttcttttgcatgatttcccagagttcctttgtgattac
cattatgggttctgtgatgtgatcccacctaattgtatccaattaagaaatttgatcctg
agtgccttcccaagaaacatgaggctcccagacccattcactcctaatctgaaggtggat
atgttgagtgaaataaacatcgcaccccggattctcaccaatttcactggagtaatgcca
cctcaattcaaaaaggatttggattcctatcttaaaactcgatcaccagtcacttttctg
tctgatctgcgtagcaacctacaggtatccaatgagcctggcaatcgctacaaccttcag
cttatcaatgcactggtgctctacgtaggaactcaggccattgcacacatccacaacaag
ggcagcacaccttccatgagcaccatcactcactcggcacacatggacatcttccagaac
ctggctgtggacttggacactgagggtcggtatctcttcttgaatgcaattgcaaatcag
ctgcggtacccaaatagccacactcactacttcagctgcaccatgctgtacctttttgca
gaggccaacactgaagctatccaggaacagatcacaagggttctcttggaacggttgatt
gtaaataggccacatccttggggtcttcttattactttcattgagctgattaaaaatcca
gcatttaagttctggaaccatgagtttgtacactgtgccccagaaattgaaaagttattc
cagtcggttgcacagtgctgcatgggacagaagcaggcacagcaagtaatggaagggaca
ggtgccagttag
DBGET
integrated database retrieval system
