Entry |
|
Symbol |
Alyref
|
Name |
(RefSeq) Aly/REF export factor
|
KO |
|
Organism |
hgl Heterocephalus glaber (naked mole-rat)
|
Pathway |
hgl05168 | Herpes simplex virus 1 infection |
|
Brite |
KEGG Orthology (KO) [BR:hgl00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101714006 (Alyref)
09122 Translation
03013 Nucleocytoplasmic transport
101714006 (Alyref)
03015 mRNA surveillance pathway
101714006 (Alyref)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101714006 (Alyref)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101714006 (Alyref)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:hgl03019]
101714006 (Alyref)
03041 Spliceosome [BR:hgl03041]
101714006 (Alyref)
Messenger RNA biogenesis [BR:hgl03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101714006 (Alyref)
TREX complex
101714006 (Alyref)
Spliceosome [BR:hgl03041]
Complex C
Other components
EJC/TREX
101714006 (Alyref)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101714006 (Alyref)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Un
|
AA seq |
256 aa
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQATARVNRGGGPMRNRPA
LARGAAGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDAD
IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLV
TSQIETQRRPAPSINRGGMTRNRGSGGFGGGGGARRGTRGGSRGRGRGTGRSSKQQLSAE
ELDAQLDAYNARMDTS |
NT seq |
771 nt +upstreamnt +downstreamnt
atggccgacaaaatggatatgtccctggacgacatcattaaactgaaccggagccagcgg
ggcggccgcggcgggggtcgtggccgcggcagggccggctcccagggtggccgcggcggt
ggggctcaggccaccgctcgggtgaatcgaggcggcgggcccatgaggaatcggccggcc
ctcgcccgcggcgcggcgggcggcggcaggaaccggccggcgccttacagcaggccgaag
caacttcccgacaagtggcagcacgaccttttcgacagcggctttggaggcggtgccggc
gtggagacagggggaaagctgttagtgtcaaacctggacttcggagtgtcagacgcagat
attcaggaactctttgctgaatttggaacactgaagaaggcggctgtgcactatgatcgc
tctggacgaagtttaggaacagcagatgtgcactttgaacggaaggcagatgccctgaag
gctatgaagcagtacaacggggtccctctggatggccgccccatgaacatccagctcgtc
acgtcacagatagagacacagcggagacctgcaccgagcatcaacagaggtggcatgacc
agaaaccgcggctctggaggctttggcggcggcggtggtgcccggagaggaacccgcgga
ggcagccggggacgaggcagaggcactggcaggagctcaaagcagcagctttcggccgag
gagctggacgcacagctggacgcttacaatgcgaggatggacaccagctaa |