KEGG   Heterocephalus glaber (naked mole-rat): 101714006
Entry
101714006         CDS       T02812                                 
Symbol
Alyref
Name
(RefSeq) Aly/REF export factor
  KO
K12881  THO complex subunit 4
Organism
hgl  Heterocephalus glaber (naked mole-rat)
Pathway
hgl03013  Nucleocytoplasmic transport
hgl03015  mRNA surveillance pathway
hgl03040  Spliceosome
hgl05014  Amyotrophic lateral sclerosis
hgl05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:hgl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101714006 (Alyref)
  09122 Translation
   03013 Nucleocytoplasmic transport
    101714006 (Alyref)
   03015 mRNA surveillance pathway
    101714006 (Alyref)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    101714006 (Alyref)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    101714006 (Alyref)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hgl03019]
    101714006 (Alyref)
   03041 Spliceosome [BR:hgl03041]
    101714006 (Alyref)
Messenger RNA biogenesis [BR:hgl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     101714006 (Alyref)
    TREX complex
     101714006 (Alyref)
Spliceosome [BR:hgl03041]
 Complex C
  Other components
   EJC/TREX
    101714006 (Alyref)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    101714006 (Alyref)
SSDB
Motif
Pfam: RRM_1 FoP_duplication FYTT RRM_occluded
Other DBs
NCBI-GeneID: 101714006
NCBI-ProteinID: XP_004861024
UniProt: A0AAX6PX85
LinkDB
Position
Un
AA seq 256 aa
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQATARVNRGGGPMRNRPA
LARGAAGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDAD
IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLV
TSQIETQRRPAPSINRGGMTRNRGSGGFGGGGGARRGTRGGSRGRGRGTGRSSKQQLSAE
ELDAQLDAYNARMDTS
NT seq 771 nt   +upstreamnt  +downstreamnt
atggccgacaaaatggatatgtccctggacgacatcattaaactgaaccggagccagcgg
ggcggccgcggcgggggtcgtggccgcggcagggccggctcccagggtggccgcggcggt
ggggctcaggccaccgctcgggtgaatcgaggcggcgggcccatgaggaatcggccggcc
ctcgcccgcggcgcggcgggcggcggcaggaaccggccggcgccttacagcaggccgaag
caacttcccgacaagtggcagcacgaccttttcgacagcggctttggaggcggtgccggc
gtggagacagggggaaagctgttagtgtcaaacctggacttcggagtgtcagacgcagat
attcaggaactctttgctgaatttggaacactgaagaaggcggctgtgcactatgatcgc
tctggacgaagtttaggaacagcagatgtgcactttgaacggaaggcagatgccctgaag
gctatgaagcagtacaacggggtccctctggatggccgccccatgaacatccagctcgtc
acgtcacagatagagacacagcggagacctgcaccgagcatcaacagaggtggcatgacc
agaaaccgcggctctggaggctttggcggcggcggtggtgcccggagaggaacccgcgga
ggcagccggggacgaggcagaggcactggcaggagctcaaagcagcagctttcggccgag
gagctggacgcacagctggacgcttacaatgcgaggatggacaccagctaa

DBGET integrated database retrieval system