Heterocephalus glaber (naked mole-rat): 101714532
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Entry
101714532 CDS
T02812
Symbol
Cic
Name
(RefSeq) capicua transcriptional repressor
KO
K20225
capicua transcriptional repressor
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
101714532 (Cic)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hgl03000
]
101714532 (Cic)
Transcription factors [BR:
hgl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101714532 (Cic)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
101714532
NCBI-ProteinID:
XP_004873087
UniProt:
A0A0A7HUB9
LinkDB
All DBs
Position
Un
AA seq
1616 aa
AA seq
DB search
MYSAHRPLMPASGAASRGLGMFVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQPSEAQQ
PASHPVASNQSKEPAESAAVAHEQPQGGTGSADPGRPPGATCPESPGPGPLHTLGVLEPG
KGPPPTTEEEVPGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRTQSLSALPKE
RDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYA
LGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLAGGHKETRERSM
SETGTAAAPGVSSELLSVAAQTLLSSDTKVPGSGSCGAERLHAVGGPGSARPRAFSHSGV
HSLDGGEVDSQALQELTQMVSGPTSYSGPKPSTQYGTSGPFATPSEGGTLAAGGRPPLLP
TRASRSQRAASEDMTSDEERMVICEEEGDDDVIADEGFGTTDIDLKCKERVTDSESGDSS
GEDPEGNKGFGRKVFSPVIRSSFTHCRPALDPEPPGPPDPPAAAAFGKGYGPTPSSSSSS
SSSSLAASTSVATSFSLGSGTFKVQESGQGSAAGPLRPPLSGAGGPATSSKVTRFLPTDP
ATFRRKRPESVGCLEPPGPSVIAAPPSGGGNILQTLVLPPNKEEREGSGARVPSVPAPSL
AYGTPAAPLSRPAATMVTNVVRPVSSTPVPIASKPFPASGRAEASPNDTAGARTEMGTGS
RVPGGSPLGVSLVYSDKKSAATSPAPHLVAGPLLGTVGKAPATVTNLLVGTPGYGAPAPP
AVQFITQGAPSSGTTVGSGAGSGSGPNGPVPLGILQSGALGKAGGITQVQYILPTLPQQL
QVAPAPAAAPGTKTAAPSGPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIPILQPVPSAP
PPKAQSVSPVQAPPPGGSAQLLPGKVLVPLAAPSMSVRSGGAGQPLPLVSPPFSVPVQNG
AQPPSKIIQLTPVPVSTPSGLVPPLSPATLPGPTSQPQKVLLPSSTRITYVQSAGGHTLP
LGTSPASSQAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSAGQAPLLAPGQVGVSPVP
SPQLPPVCTASGGPVITAFYPGSPAPTSSAPLAQPSQAPPSLVYTVATSTTPPAAATILP
KGPLVTATATPAPTSPFPSATAGSMTYSLVAPKAQRPSPKAPQKVKAAIASIPVGSFEAS
ATGRPGPVCRQPLEPGPAREPSATESELEGQPTSPAPPPPPETWPPTARSSPPLPLPAEE
RTGTKGPDTMASKFPSSSSDWRVPGMGLESRGEPPTPPSPAPAPAAALGGSSSSSEGSSG
RAAGDTPERKEAASTGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFRPEEVLP
SPTLQSLATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKSAKC
EGDIFTFDRTGTEAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAA
FQARYADIFPSKVCLQLKIREVRQKIMQAATPTEQPPGAEAPLPGPPPAGTAATPASTPS
PAGGPDPTLPGSDSGTVQAAPPLPPPPEPGPGQPGWEGPPQPSSPLSGPSTAATSR
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atgtactcggcccacaggcccctgatgcccgcgtctggcgcggcctcccgtggcctcggc
atgttcgtgtggacaaatgtggaacctcgctctgtggccgtgttcccctggcattcttta
gttccctttctggcacccagccagccagacccctctgtgcagccgagtgaggcccaacaa
cctgccagccacccagtggcctccaaccagagcaaagaaccggctgagtcagcagctgtt
gctcatgagcagccacaaggagggacagggagtgctgaccctgggcggccccctggagcc
acatgccctgagagcccaggtcctggacctctacatactttgggagtgctggaacctggt
aaaggtcctcctcccaccactgaggaggaggtccctggccccccaggagaaccccggctg
gatagtgagacagagagcgaccatgatgatgcctttctttccatcatgtctcctgagatc
cagttgcctctgccacctggaaaacgtcggacacagtcgctcagtgccctgcctaaggaa
agagattcgtcttctgagaaggatggacgcagccccaacaagcgggagaaggaccatatc
cggcggcccatgaatgccttcatgatcttcagtaagcgtcaccgagccctggtccaccag
cgtcatcccaaccaggacaaccggaccgtcagcaagatcctgggcgagtggtggtatgct
ctggggcccaaagagaagcagaagtaccatgatctggccttccaggtgaaggaggcccac
ttcaaggcccacccagattggaagtggtgcaacaaggaccgaaagaagtccagctcagag
gccaagcccacgagcctggggctggcaggcgggcacaaggagacgcgggagcggagcatg
tcggagacgggcactgccgccgcccctggggtgtcctctgagctcctgtccgttgcagcc
cagacactcttgagctcagacaccaaggttccggggagtggctcctgtggagcagaacgg
ctgcacgcagttgggggacctggctcagcccggccccgagccttttcccacagtggggta
cacagcctggacggtggggaagtagacagccaggcactacaagaactgactcagatggtg
tctggccccacatcatactctggcccaaagccttccacccagtatggcacttcaggcccc
ttcgcaacccccagtgagggaggcaccttggcggccggtgggcggcccccactgctgccc
acccgagcctctcgttcccagcgtgcagccagtgaggacatgaccagtgatgaagaacgc
atggtcatctgtgaagaagaaggggacgatgatgttatcgctgatgaaggttttggtacc
actgatattgatctcaagtgcaaggagcgggtgactgatagtgagagtggagacagctct
ggggaggacccagagggcaacaagggctttggccgtaaggtgttctcacctgtgatccgt
tcttccttcacccattgccgtccagcactggaccctgagcctccagggcccccagatcca
cctgcagctgcagcctttggcaaaggctatggccccaccccatcttcttcctcttcctcc
tcctcctcctcacttgctgcctcaacctcagtagccacctccttctcactggggtctgga
accttcaaagtccaggagtctggtcagggcagtgcagcaggcccacttcggcctccactc
tctggggctggaggcccagcaacatcttccaaggtcactcggtttctcccaacggatcct
gccaccttccggcgcaagagacctgaaagtgttgggtgcttggagccaccaggtccctca
gtcattgcggcacctcccagtgggggaggaaacatcctgcagacactagtcctgccccca
aacaaggaggagcgggagggcagtggggcccgagtaccctcggtcccagccccatcactg
gcctatgggaccccagcagcccctttgtcccgccctgctgccaccatggtcaccaacgta
gtgcggcctgtcagcagcactcctgtgcccattgcctctaagcccttccccgcctctggc
agggctgaggcatctccaaatgacacagcaggtgccaggactgaaatgggcactgggtct
cgggtacctgggggctccccgctgggtgtcagtttagtgtattcggacaagaagtcagca
gccacctcaccagccccacacttggtggctgggcccctgctgggcactgtggggaaggca
cctgccactgtcaccaacctgctggtgggtactccaggctatggggcccctgcaccccct
gctgttcaatttattactcagggggcccctagcagtgggaccactgtaggctcaggagca
ggttctggaagtggtcccaatgggccagtacccctgggcatcctgcagtcaggtgccctg
ggcaaggctgggggaatcacccaggtacagtacatcctgcccacgctgccccagcagctt
caagtggcacctgccccagcagcagcccctgggaccaagacagcagctcccagcggccct
gcacccaccaccagcatccgtttcaccctcccgccgggcacctccaccaacggcaaggtc
ctggccgccactgcacccacccctggcatccctatcttgcagcctgtaccctctgcacca
ccccctaaagcccagtcagtttctcccgtgcaggccccacccccaggtggctcagcccag
ctgctacctgggaaggtactagtacccctggctgcccctagcatgtcagtacggagtgga
ggggctggccagccactgcccctggtcagtccaccattctcagtacctgtgcagaatggt
gcccagccacccagcaagatcatccagctgactcctgtgcctgtgagcacacccagcggc
ctggtgccgcccttgagcccagccaccctccctggacccacctcacagcctcagaaggtc
ctgttgccctcctccaccagaatcacctacgtgcagtcggcaggtgggcacacactgcct
ctgggcaccagccctgcatccagccaggctggaacagttacctcctatgggcccacaagc
tctgtagctctaggcttcacttcactggggcccagtggaccggcattcgtgcagcccctg
ctctcagctggccaggccccactgctggctcctggccaggtgggcgtgtcacctgtgccc
agcccccagctgcctcctgtctgcacagcctcaggaggtccggtcataacagcgttttac
ccaggaagcccggcacccacctcctcagcacccctggcccagccatcccaggccccccca
agcctggtgtatactgtggccactagtaccaccccacctgctgctgccaccattctgccc
aagggcccactggtcactgccactgccaccccagcccccactagccctttccctagtgcc
acagcgggttccatgacctacagcttagtggcccccaaggcccagcgtcccagcccaaag
gccccccaaaaagtgaaggcagccattgccagcattcctgtaggctcctttgaggcaagt
gccactgggcggcctggccctgtttgccggcagcctctggagcctggtccagcccgagag
ccatcagccacagagtctgagcttgaggggcagcctacatcaccggcccctccaccaccc
ccagagacctggcctcccacagcccggagcagtccccccctgcccctgcctgctgaggaa
cggactggtaccaagggccctgacaccatggccagcaaattccccagctcatcctcagac
tggcgtgtccctgggatgggcctggagagccgtggggagcctcccactcctcccagtccg
gccccagctccagctgcagccctgggtggtagcagtagcagcagcgagggcagcagtggg
agggcggctggggacacacctgagcgaaaggaggctgctagtactggcaagaaggtgaag
gtgcggcccccacccctgaagaagacctttgactctgtggacaacagggtcctgtcggag
gtagactttgaagaacgctttgctgagctgcccgagtttcggccagaggaagtgctgcca
tcacccaccctgcagtctctggccacctcacctcgggccatcctgggctcttaccgcaaa
aagaggaagaactccacggacttggactcagcaccagaggaccctacctcacccaagcgc
aagatgaggagacgatctagctgcagctcagagcccaacacccccaagagtgccaaatgc
gagggggacatcttcacctttgaccgaacaggtacagaggctgaggatgtgctaggagag
ctggaatatgagaaggtgccatactcctcacttcggcgcaccctggaccagcgtcgggcc
ctggtcatgcagctcttccaggaccatggcttcttcccatcagcccaggctacagcagcc
ttccaggcccgctatgcagacatcttcccgtctaaggtttgtctgcaactgaagatccga
gaggtgcgccagaagatcatgcaggcagccactcccacggagcagccccctggagctgag
gcccccctccctggaccgcccccagctggcactgctgctacccctgcttccacgcctagc
cctgctggaggccccgaccccaccttacctggctcggactctggcacagtccaggctgcc
ccaccactgcctccacccccagagccgggacctggacagcctggctgggaggggcccccc
cagccttcctctccactctcaggcccttccacagctgccacaagcaggtga
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