Heterocephalus glaber (naked mole-rat): 101714686
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Entry
101714686 CDS
T02812
Symbol
Thoc2
Name
(RefSeq) THO complex 2
KO
K12879
THO complex subunit 2
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl03013
Nucleocytoplasmic transport
hgl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101714686 (Thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
101714686 (Thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hgl03019
]
101714686 (Thoc2)
03041 Spliceosome [BR:
hgl03041
]
101714686 (Thoc2)
Messenger RNA biogenesis [BR:
hgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
101714686 (Thoc2)
Spliceosome [BR:
hgl03041
]
Complex C
Other components
EJC/TREX
101714686 (Thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101714686 (Thoc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
101714686
NCBI-ProteinID:
XP_012933342
LinkDB
All DBs
Position
Un
AA seq
1591 aa
AA seq
DB search
MAAATVAVPAEWIKNWEKSGRGEFLHLCRLLSENKSHDSSTYRDFQQALYELSYHVIKGN
LKHEQASNVLNDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSD
TVLKERLDPETLESFGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFGCRPEHDDFFMSLLESYMSMCE
PQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK
REIVEAKQIVRKLTMVVLSSEKLDEREKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQH
AQNIMDQMPPYYAASHKLIALAICKLIHVTIEPLYRRVGVPKGAKGSPVNALQNKRAPKQ
AESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVIL
SCLLGITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDS
LKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGL
LQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGIIFQEGGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGS
KQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPHTSYE
REVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRV
FSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL
GQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPSPRNAVASL
QNGPGSGSSSSSSAGSSSKSDESSNEENDKSRERSQCGVKAVNKVSSATPKGNSNNGNSG
SNSSKAVKENDKAKGKGKEKEKKEKTPATSPEARVLGKDGKEKPKEERPNKDEKARETKE
RTPKFDKEKEKFKKEEKAKDEKFKTAVPIVEAKSTQEREREKEPSRERDIAKEMKTKENV
KGGEKTPVSGSLKSPVPRSDIAEPEREQKRRKIDTHPSPSHSSTVKDSLIELKESSAKLY
INHTPPPLSKSKEREMDKKDLDKSRERSRERERKDEKDRKERKRDHSNNDREAPPDLIKR
RKEENGTMGVSKHKSESPCESPYPNEKDKEKNKSKSSGKEKGSDSFKSEKMDKISSGGKK
ESRHDKEKIEKKEKRYCSGKEEKKQYPFHLY
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcgactgtggccgtccccgctgagtggataaagaactgggagaaatcaggg
agaggcgaatttttgcatttatgccggcttctcagtgaaaataaaagccatgatagttca
acttacagagatttccagcaagctctctatgaattgtcatatcatgtcattaaaggaaat
ttaaagcacgaacaggcatcaaatgttcttaatgacattagtgaatttcgtgaggatatg
ccctccattcttgctgatgttttctgtatattagatattgagacaaattgtttagaagaa
aaaagcaagagagactattttacacagttggtattagcatgtttgtatttagtttcagac
acagttctaaaggaacgcctagatccagaaacattggaatcatttggactcattaaacag
tcacagcagttcaatcaaaagtcagttaaaatcaagacaaaactcttctataagcagcaa
aaattcaatttgttaagagaagagaatgaagggtatgccaagctgattgctgaattgggg
caagatttatctggaaatattactagtgatttaatcttagaaaatataaaatctttaata
ggatgctttaatctggatcccaatagagttttggatgtcattttagaagtgtttggatgc
aggccagaacacgatgacttctttatgtctttattagaatcttacatgagtatgtgtgaa
ccgcaaacactgtgtcatattcttgggttcaaattcaagttttaccaggaaccaaatggc
gagactccatcgtctttatacagagttgcagcagtacttctgcaatttaatcttattgat
ttagatgatctttacgtacatcttcttccagctgataattgcattatggatgaacacaaa
cgagaaattgtggaagctaagcaaattgttagaaaacttacaatggttgtattgtcttct
gaaaaacttgatgagcgagagaaagaaaaggaaaaagaagaggagaaagtagagaagcca
cctgacaaccaaaaacttggtttgttggaagctttgttaaagatcggtgattggcagcat
gcacaaaacattatggatcagatgcctccatactatgcagcttcacataagctaatagcc
cttgctatttgcaagctcattcacgtaactattgagcctctctaccgaagagttggcgtt
cctaaaggtgctaaaggctcacctgttaatgctttgcaaaacaagagagcaccaaagcaa
gcagagagctttgaagatttgaggagagatgtattcaatatgttctgttaccttggtcct
cacctttctcatgatcctattttatttgcaaaagtggtgcgcataggcaagtcatttatg
aaggagtttcagtctgatggaagcaaacaagaagataaagagaaaacggaagttatcctt
agctgtttgctaggcattaccgaccaggtactacttccatctctttctttgatggactgc
aatgcttgtatgtctgaggaactatggggaatgtttaaaacatttccttaccagcataga
taccgtctgtatggccagtggaagaatgaaacttataacagtcacccacttttagtaaaa
gttaaagctcaaacaatagacagagccaaatatatcatgaagaggctaaccaaggaaaat
gtgaaaccttcaggaagacaaattgggaagttgagccacagcaatccaacaattttgttt
gattatatcctgtcacaaatacagaagtatgataacttaataacacctgtagtagattca
ttgaaatacctcacttcattgaattatgatgtcttggcctattgtatcattgaagcttta
gctaatccagaaaaggagagaatgaaacatgatgacacaactatctccagctggcttcag
agtttggctagtttctgtggtgcagtttttcgtaaatatccaattgatcttgcgggtctt
ctgcagtatgtggccaatcaactaaaggcaggcaaaagttttgacctgcttatattgaaa
gaagtggtgcaaaaaatggcaggaatagaaattacagaggagatgacaatggaacaacta
gaggctatgacaggtggtgagcagttgaaagctgagggtggttattttggccagatcaga
aacactaaaaaatcctctcagagattaaaggatgcactgttggaccatgatcttgctctt
cctctctgcttacttatggctcagcagaggaatgggataatctttcaggaaggtggagag
aaacatttgaaacttgtgggaaaactctatgaccagtgtcatgataccctggtacagttt
ggtgggtttttagcatcaaatctaagcacagaagattatataaagcgagtgccttccatt
gatgtgctctgtaatgaatttcacacaccccatgatgcagcattttttctgtctaggcca
atgtatgcacaccacatttcgtcaaagtatgatgaacttaaaaaatcagaaaagggaagt
aaacagcaacataaagttcataaatacattacatcatgtgagatggtgatggctccagtc
catgaagcagtggtctccttacatgtttccaaagtctgggatgacatcagccctcaattc
tatgccacattctggtcactgacaatgtatgaccttgcagttccacataccagctatgaa
cgagaagtcaataaacttaaagtccaaatgaaagcaattgatgacaatcaggaaatgcct
cccaataaaaagaaaaaagagaaggaacgttgtactgcccttcaggacaagcttcttgaa
gaagaaaagaaacagatggaacacgtacagagagttctacaaagactgaaattagaaaag
gacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacagctg
tgtatatttcctcgatgtattttttcagcaattgatgctgtttactgtgctcgttttgtt
gagttggtacatcaacaaaaaactccaaatttttccacacttctttgctatgatcgagtt
ttctctgatataatttacacagttgcaagctgtactgaaaatgaagctagccgatatggg
agatttctttgctgtatgttagagactgtaaccaggtggcatagtgatagagccacatat
gaaaaggaatgtggaaactatccaggattccttaccatattgcgggcaactggatttgat
ggtggaaataaagctgatcaattagattatgaaaattttcgacacgttgtacataaatgg
cattacaagctaaccaaggcatcagttcattgccttgaaacaggcgaatatactcacatc
aggaatatcttgattgtgctaacaaaaatacttccttggtatccaaaagttttgaatttg
ggtcaggctttggaaagaagagtgcataaaatctgccaagaagaaaaagagaagaggcca
gatctatatgcattggctatgggctactctgggcagttgaaaagtagaaagtcatacatg
ataccagaaaatgagtttcatcacaaagacccttctccgaggaatgctgttgccagttta
caaaatgggcctggtagtgggtcttcttcttcatcatcagcaggaagttcatctaagtcg
gatgagagcagtaatgaggagaatgataaatcaagggagagatctcagtgtggtgtgaaa
gctgttaataaagtgtctagtgccacacctaaaggaaattcaaataatggaaatagtggc
tctaacagtagcaaagctgttaaagaaaatgacaaagcaaaagggaaagggaaagaaaaa
gagaaaaaagaaaagactccagctactagtccagaagccagggtacttggtaaagatggt
aaagaaaaaccaaaggaagagcggccaaataaagatgaaaaagcaagagagaccaaggaa
agaacacctaagtttgacaaagagaaagaaaaattcaagaaagaagaaaaagctaaagat
gagaaattcaagactgctgtccccatcgtagaagcaaaatcgactcaagaaagggaaaga
gagaaagagccgtcgagagaaagagatatagcaaaggaaatgaaaacaaaggaaaatgtt
aaaggaggagaaaaaacaccagtttctgggtccttgaagtcacctgttccccgatcagat
attgcagaacctgaaagggaacaaaaacgtcgcaaaattgatacccacccttctccatca
cattcctccacagtaaaggacagtctcatcgaactcaaggagtcttcagcaaagctctac
attaatcatactcctccaccactgtccaagagtaaggagagagaaatggacaagaaagat
ttggacaagtcaagggaaagatcccgagaaagagagagaaaagatgaaaaggacaggaaa
gaacggaaaagggatcattcaaacaatgaccgtgaagcgccaccggacttaatcaagagg
aggaaagaggaaaatggaacgatgggggtttcaaaacacaaaagtgaaagtccttgtgag
tctccttatccaaatgagaaagacaaggaaaaaaataagtcaaaatcttcaggcaaagaa
aaaggcagtgattcatttaaatccgagaagatggataaaatctcctccggtggcaaaaag
gagtccaggcatgataaagaaaagatagaaaagaaagagaaacggtactgttcaggaaag
gaagagaagaaacaatatccttttcatctttattaa
DBGET
integrated database retrieval system
