KEGG   Heterocephalus glaber (naked mole-rat): 101714830
Entry
101714830         CDS       T02812                                 
Symbol
Pcdh20
Name
(RefSeq) protocadherin 20
  KO
K16498  protocadherin delta 1
Organism
hgl  Heterocephalus glaber (naked mole-rat)
Pathway
hgl03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:hgl00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    101714830 (Pcdh20)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:hgl01009]
    101714830 (Pcdh20)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:hgl04515]
    101714830 (Pcdh20)
Protein phosphatases and associated proteins [BR:hgl01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     101714830 (Pcdh20)
Cell adhesion molecules [BR:hgl04515]
 Cadherins
  Protocadherins
   101714830 (Pcdh20)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_CELSR2_9th
Other DBs
NCBI-GeneID: 101714830
NCBI-ProteinID: XP_004844339
UniProt: G5BHE3
LinkDB
Position
Un
AA seq 952 aa
MLGQGNLRSSRALAVSWRPATWHPCLDMGSLHRPRSSTSHRNLQHVFLFVLFVGPFHCLA
SYSRATELLYSLNEGLPAGVLIGSLAEDLRLVPGASGRQNQKAQSPERAGAEWNPPLSFS
LASGRLSGQYVTLDNRSGELHTSSRAIDREALCLEGGGGAAWSSSISISSSPSSDSCLLL
LDVLVLPQEYFRFVKVKIAIRDINDNAPQFPISQISVWVPENAPVNTRMAIEHPAVDPDI
GTNGVQTYRLLDYQGMFTLDVEENENGERTPYLIVMGALDRETQDQYVSIIIAEDGGSPP
LSGSATLTISISDINDNCPLFIDSQINVTVYGNATVGTPIAAVQAVDRDLGTNALITYTY
SQKVPQASKDLFHLDETTGVIKLFNKIGGNVLQTHKLTILANGPGCIPAVITALVSIIKV
IFRPPEIVPRYIANEIDDVVYLKELEPVNTPIAFFTIRDPEGKYKVNCYLDGEGPFRLSP
YKPYNNEYLLETTKPMDYELQQSYELAVVAWNSEGFHVKRVIKVQLLDDNDNAPVFLQPL
VELTIEENNAPNAFLTKLYATDADSGERGQVSYFLGPDAPSYFSLDSVTGILTVSTQLDR
EEKEKYRYTVRAVDCGKPPRESVATVALTVLDKNDNSPRFINKDFSFFVPENFPGYGEIG
VISVTDADAGQNGWVALSVVNQSDIFVIDTGKGMLRAKVSLDREQQSSYTLWVEAVDGGE
PALSSSTKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMNAV
IAYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMV
NLFVNDTVSNESYIESLLRKEPEINVEEKEPQISIEPTHRKVESVSCMPTLVALSVISLG
SITLVTGLGIYICLRKGKKHHREDENLEVQIPLKGKIDLHIRERKPIDISNI
NT seq 2859 nt   +upstreamnt  +downstreamnt
atgctcggccaagggaatttgcgcagctcgagggccctagcagtgagctggcgcccggcg
acctggcacccgtgcctggatatggggagtctacatcgtcccaggagcagcaccagccac
aggaacctgcagcatgtgtttctgtttgtcctcttcgtgggacccttccactgtctcgcg
agttacagccgggccacggagcttctgtacagcctgaacgagggactgcccgcgggggtg
ctgatcggcagcctggccgaggacctgaggctggtgcctggagcctcaggaagacagaac
cagaaggcacagtcaccagagcgtgctggtgctgagtggaacccccctctctctttcagc
ctggcttctgggagactgagtggccagtacgtgaccctagacaaccgttctggagagctg
cacacttcttcacgggcgatcgacagagaggccctatgtcttgaaggaggtggaggggct
gcctggagcagcagcatttctatttcctcctctccttcctcggactcttgccttttgctt
ctggatgttctggtcctacctcaggaatattttaggtttgtgaaggtgaaaattgccatc
agggacatcaatgacaatgctccacagttccctatttcccagatctcagtctgggtccca
gaaaatgcacctgtgaacacgaggatggccatagagcatcctgctgtggacccagatata
ggcactaatggggtgcaaacctatcgcttactggactaccagggcatgttcaccttggat
gtggaggagaatgagaatggagagcgcaccccctacctaattgtcatgggtgcattggac
agggaaacccaagaccagtacgtcagcatcatcatagcggaggatggtgggtctccacca
ctgtcgggcagtgccaccctcaccattagcataagtgacattaatgacaattgccctctt
ttcatagactcacaaatcaatgtgactgtgtatgggaatgctacagtgggcactccaatt
gcagctgtccaagctgtggatagagacttgggaaccaatgctctgatcacctacacttac
agccagaaagttccacaagcatccaaggatttattccacctagatgaaactactggagtc
attaaactcttcaataaaattggaggaaatgttctacaaacacacaagcttactatcctt
gctaatggaccaggctgcatccctgctgtgattactgctctggtgtccattatcaaagtc
attttcagaccacctgaaatagtcccacgttatatagcaaatgagatagatgatgttgtt
tatctgaaagaactggaacctgttaacactccaattgcgttctttaccatacgagatcca
gaaggaaaatacaaggttaactgctacctggacggtgaagggccatttaggttatcaccc
tacaaaccatacaataatgagtatctgctggagaccacaaaacctatggactatgagcta
cagcagtcctatgaactagctgtggtagcctggaactcagagggatttcatgtcaaaaga
gtcattaaagtgcaacttctagatgacaatgataatgctcctgttttccttcagcccttg
gtagaactaaccattgaagaaaacaatgctcccaatgcttttttgactaagctgtacgct
acagatgctgacagtggagagagaggccaggtctcatatttcctgggacctgatgctcca
tcatatttttccttagacagtgtcacaggaattctgacagtttccactcagctggaccga
gaagagaaagaaaagtacaggtatacagtgagagctgttgactgtggaaagccgcccaga
gaatcagtagccactgtggctctcactgtgttggataaaaatgacaatagtcctaggttt
atcaacaaggacttcagcttttttgtcccagaaaacttcccaggatatggcgaaattggt
gtaattagtgtgacagatgctgatgctgggcaaaatggatgggtggcactctcagtggtg
aaccagagtgacatttttgtcatagatacaggaaagggcatgttgagagctaaagtctcc
ttagacagagagcagcaaagctcctatactttgtgggttgaagcagttgatgggggtgag
cctgccctctcctcttccacaaaaatcacaattcttcttcttgatatcaatgacaaccct
cctcttgtcttatttcctcagtctaatatgtcttatctattggtactgccttctactctc
cctggctccccagtcacagaggtttatgctgttgataaagacacaggcatgaatgctgtt
atagcttacagcatcataggaagaagaggtcccaggcctgaatcctttaggattgaccct
aaaaccggtaatattactttggaagaggcattgctgcagacagattatggactgcatcgc
ttgctggtgaaagtgagtgatcatggttatcctgagcccctccactctacagtcatggtg
aatctgtttgtcaatgacacagtcagtaacgagagctatattgagagtcttctaagaaaa
gaaccagaaattaatgtagaggagaaagaaccacagatctccatagaaccaactcatagg
aaagttgaatctgtgtcctgtatgcccacattagtagctctgtctgtaataagcttgggt
tccatcacactagtaacagggctgggcatatacatctgcttacgaaaagggaaaaaacat
cacagggaagatgaaaatctggaagtgcaaatcccactaaaaggaaaaattgacttgcat
ataagagagaggaaaccaatagatatttctaatatttga

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