Heterocephalus glaber (naked mole-rat): 101715554
Help
Entry
101715554 CDS
T02812
Symbol
Ptbp1
Name
(RefSeq) polypyrimidine tract binding protein 1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hgl03019
]
101715554 (Ptbp1)
03041 Spliceosome [BR:
hgl03041
]
101715554 (Ptbp1)
Messenger RNA biogenesis [BR:
hgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
101715554 (Ptbp1)
Spliceosome [BR:
hgl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101715554 (Ptbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
101715554
NCBI-ProteinID:
XP_004866062
UniProt:
A0A0P6JI45
LinkDB
All DBs
Position
Un
AA seq
557 aa
AA seq
DB search
MDGIVPDIAVGTKRGSDELFSTCVTNGPFIMSSNSASTANGNDSKKFKGDSRSAGVPSRV
IHIRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPV
LRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQ
SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNSQFQALLQYADPVSAQHAKLS
LDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGAP
GIISASPYAGAGFPPTFAIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRIGIPGLGGA
GNSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGSQAQLAMSHL
NGHKLHGKPIRITLSKHQNVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSA
TLHLSNIPPSVSEEDLKSLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNH
DLGENHHLRVSFSKSTI
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatcgtcccagacatagcagttggtacaaagcggggatctgacgagctcttt
tctacgtgtgtaaccaacgggccctttatcatgagcagcaactcggcttccacagcaaac
ggaaacgacagcaagaagttcaaaggtgacagcaggagtgctggcgtcccctccagagtg
atccacatccgaaagctgcccagcgacgtgactgaaggcgaggtcatctccctggggctg
ccctttgggaaggtcaccaatctcctgatgctcaaggggaagaaccaggctttcatcgag
atgaacacggaggaggcagccaacaccatggtgaactactatacctctgtgacgcctgtc
ctgcgaggtcagcccatctacatccagttctccaaccacaaagagctcaagactgatagc
tccccgaaccaggcgcgggcccaggcagcactacaggctgtgaactctgtccagtcgggg
aacctggccctggctgcttcggcggctgctgtggacgcagggatggcaatggctgggcag
agccccgtgctcaggatcatcgtggagaacctcttctaccccgtgaccctggatgtgctg
caccagatcttctccaagtttggcactgtcctgaagatcatcaccttcacgaagaacagt
cagttccaggcgctgctccagtacgccgaccccgtgagcgcccagcacgccaagctgtcg
ctggacgggcagaacatctacaacgcctgctgtaccctgcgcatcgacttctccaagctc
accagcctcaatgtcaagtacaacaacgacaaaagccgtgactatacgcgcccagacctg
ccctctggggacagccagccctcgctggaccagaccatggccgcagccttcggtgcacct
ggtataatctcagcctctccgtatgcaggagctggtttccctcccacctttgccattcct
caagccgcaggcttgtctgtccccaacgtgcacggagcgctggcgcccctggccattccc
tcagcagctgcagcagcagctgcagcgggccgcatcggcatcccaggcctcgggggggcc
gggaactctgtcctgctggtcagcaacctcaacccggagagagtcacaccccaaagcctc
tttattcttttcggcgtttacggtgacgtgcagcgggtgaagatcttgttcaacaagaag
gagaacgcactggtgcagatggcagatgggagccaggcccagctggccatgagtcacctg
aacgggcacaagctgcatgggaagccgatccgcatcacgctgtccaagcaccagaatgtg
cagttgcccagggagggccaggaggaccagggcctcaccaaggactatggcaactcgccc
ctgcatcgcttcaagaagcctggctccaagaacttccagaacatcttcccaccctccgcc
acactgcacctctccaacatcccgccctcagtatctgaggaagacctcaagagcctcttc
tccagcaacgggggtgtggtgaagggcttcaagttcttccagaaagaccgcaagatggcg
ctgatccagatgggctcagtggaggaggctgtgcaggccctcatcgacctgcacaaccac
gacctgggcgagaaccaccacctgcgggtgtccttctccaagtccaccatctag
DBGET
integrated database retrieval system
