Heterocephalus glaber (naked mole-rat): 101715670
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Entry
101715670 CDS
T02812
Symbol
Pkd1l2
Name
(RefSeq) polycystin 1 like 2
KO
K04988
polycystin 1L2
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hgl04040
]
101715670 (Pkd1l2)
04091 Lectins [BR:
hgl04091
]
101715670 (Pkd1l2)
Ion channels [BR:
hgl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101715670 (Pkd1l2)
Lectins [BR:
hgl04091
]
C-Type lectins
Others
101715670 (Pkd1l2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
PLAT
Ion_trans
Lectin_C
SUEL_Lectin
GPS
Motif
Other DBs
NCBI-GeneID:
101715670
NCBI-ProteinID:
XP_012927089
LinkDB
All DBs
Position
Un
AA seq
1989 aa
AA seq
DB search
MSKRNTLERVQGGKEPFYIIGCAAGLVLLGLSLRLRAVIAWPEDDSFCSKSQVAFREACY
ELVPLRRTFRNAQSWCEGQGGHLVFIRDESMQHFLQQHLSQDREWWIGLTGTSALNGTTK
GPGTWLDTCNVSFSNWQPRQAGPAGHACGYIRRGCSAEWEATDRCAQAFAFICQFEVGQS
LACEGLNATMHCGSGEVIQVQDAIYGHQTPHYCRQDAPWASDPEEDCSWVSVRDEVAGQC
QGLQXGTYFGDLCPNWGSYLWVQCQCREELWLLVSNESFIFDNVTISLTWLLSPYSGNLS
CILSMGDGHTLDPYYPSSLSSTVRHQFVCPGEFTVFAECTSSEWHVTAQKQVMLLDKMER
LSVTGCPHLSSSEAGPLCRVVFGDLLWIQVELDAGTGVTYTVLLGNITLAESTTGLQWGA
LPYNLTLDGDTQDLLGPGRQCLEIHARSNSSSSAPSQNLSIQLVEQLSGLQASWGSTQVE
LGQDLLTNNSVAHGTLEGLTFEVTGLNASFSHEEESFREPSGTHQVALPVEGTFLVTVLV
RSAFSNLSLEMGSVMVTGKESLLPGPRVQGTAQDLLRCPSQRQLLPLQRDKGHAELYDDP
GLFVDPFTTITLGWPEDDNWSWHYFRLTFWCQASQALYLTSEALLTASATAHPEDQRHQV
AIRDLLVAVGSVLDASLSYRPGETSARQAATVARLLGVAECVQTTLLLGALPGGLAATLA
TPSISLYTNRILPWSWRGTSLHVAAANSAAFTLPTGPLCSPEHPQEPVNIRTMSFPKSPF
PTGGGFDVSRTVGGLSLSSPRARLIPMKNLSEKAEILLPRPAEGHTSPTVLNLTGAKVLW
VNVTTRASALGIRLHWGPGIPLTLSLGYGYHPNATNHEAQTCLTPAAAPDEPATWILGPE
ELPFRAGVYYLSVAPESGLEPAPVEDLTVRVTTFLPHCVFWDEVQETWDDSRCQVGLRTM
HSRMPCLCCHLTFFGSTFLVMPNVVGVRQAAELFATFEDNPVVVSAVGCLCVLYVLAQIW
ARRKDVQDQAKVKLTVLEDNDPFAQYHYLVRVYTGQWRGMATSSKVTITLYGRDGESKPH
HLEGPLSPGFERGGVDIFLLSTLFPLGELWPLRLWHDNSGDWPSWFVSQVLVHDPATGQK
WYFLCNSWLSIDGGDCVLDKVFPVAAGQDRKQLSHLFFMKMSTGFQEGHLWYSIFSSSAW
SRFTRVQRVSCCFSLLLCTMLTSIMFWGVPKDPAEQKMDLGDIEFTWQEVMIRLESSLLM
FPINLLIVQIFQHAWPRGAKAQDAGTPSPAPSPQPLDDGLVTPEADTWRLVSSLCRALKL
PPPASGWDSLSSMDINTLLALVEDVICPQNPVDRGCQEEAREREDPFSLALESAPVEGSW
VSTCQYGTVETAADASKHWILRLPTQPDPRLLWGLPVSFLIGPCAFFRARRHSSSDVYQP
PLPATIEKMKATWLKKQKAFALITETLVYLGFLWMLLLVAYGQRXPSAYHFNRHLERSFT
RGFSDVLGFQEFFEWANSTLVNNLYSLHRGFLTDGSSKLVGSAHIRQVSVRESSLAPSLS
PCSFGASLHGYMPDARALYSLEEEDRPAYNGEGWNTSALNSSTRFPQAWQYQDQSQRQGS
PTXGKLALHPRGGYVVPLGRERQGAVRVLHYLFDHTWLDTLSRAVFVEFTVYNASVNLFX
VVTLTLETSGLGTFFTHAALHSLRLSPFTDAWRPFVLAAELLYFAFLLYYMVVQGQRVRQ
QKCGYFCSKWNLLELAIIPASWSAQAVFVKRAVLAERDLQRYRKHREAXIDLVPCPPPSA
ALGDIIAFLILPSTGKLWHLLRLNPKMNLITSALHHAWGDISGFIIVILVMLLPYSIASN
LMFGWKLHSYKTLFDAVETMIXLQLGIFNYEEVLDSSPVLGSFLIGSCVIFMTFVVLNLF
ISVILVAFSEEQKRAQLSEEAEIVDLLLMKILSFLGIQCKREVPQSGPEQPLLPFTARCP
GPAQASPGI
NT seq
5970 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaggaacacactggagagggtgcaagggggaaaggagcccttctacatcatt
ggatgcgcggcaggcttggtactcctggggctttccctgaggcttagggctgtcattgct
tggccagaagatgacagcttttgttctaagagccaggtagccttcagagaggcttgctat
gaacttgtaccactcagacgcaccttccgcaatgcccagagctggtgtgaaggccaagga
ggccatttggtcttcattcgagatgaaagtatgcagcactttctgcagcagcacctctcc
caggacagagagtggtggattgggctcacagggacctcagcgctcaatgggaccacaaaa
ggccccgggacctggttggacacctgcaatgtgagcttcagcaactggcagccacgacag
gcgggtcccgctggccacgcatgcggctacatcaggagaggctgctccgccgagtgggaa
gccacagaccgctgcgcccaggccttcgccttcatctgccagttcgaggttggccagagc
ctggcgtgtgaaggcctcaatgccaccatgcactgtggctccggggaggtcatccaggtc
caggacgctatctatggacatcagacccctcattactgccgccaggatgcgccgtgggcc
tcggacccagaggaggactgcagttgggtcagcgtcagggatgaggtggcaggccagtgc
caggggctgcagngcgggacctactttggagacctatgtcccaattggggcagctacctg
tgggtgcagtgccagtgccgggaagagctgtggctgctggtgtccaacgagagcttcatc
tttgacaatgtcaccatctctctgacatggctcctttctccctactctggaaacctgtcc
tgcatccttagtatgggagatggccacacccttgatccctactacccctccagcttgtcc
agcaccgtgaggcaccagttcgtgtgccccggagaattcactgtgtttgctgagtgcaca
agcagtgagtggcatgtgacagctcagaagcaagtgatgctactagacaagatggagagg
ctcagcgtcactgggtgcccccacctgtccagctcagaagctggccctctctgcagggtt
gtctttggggaccttctgtggattcaggtggagcttgatgcaggaacaggggtgacttac
actgtgctcttgggtaacataaccctggctgagtccaccaccggactccagtggggcgct
ctgccctacaacctgaccctggatggagacactcaggacctgctgggccctgggcggcaa
tgcctggagatccatgcccgaagcaacagctccagctctgcgccctcccagaacctctct
atccagctggtggagcaactgtcggggctgcaggcctcctggggttctacccaagtggag
cttggacaggacctgttgaccaacaactccgtggctcatggcaccctggaggggctgacc
tttgaggtgacaggactcaatgccagcttctcccatgaggaagagagcttcagggagcca
tctgggactcaccaggtggcacttcccgttgaaggcacctttctggtcactgtgttggtg
aggagtgccttctccaacttgagcttggagatgggaagtgtcatggtcacaggcaaggag
tctctgctgccaggaccacgcgtccagggcactgcacaagatctcctgcgatgcccttca
caaaggcagctgcttcctctgcagagagacaaagggcatgcagagctgtacgatgacccc
ggtctgtttgtggatcctttcactaccatcacgctgggctggccagaggatgacaactgg
tcttggcattacttccgcctgacattctggtgtcaggccagccaagctctatacctcacc
agcgaggccctgttgacagcaagtgccacagcccaccctgaggaccagaggcaccaggtg
gccatcagggacctgcttgtggctgtgggaagtgtactggatgcgtccctgagctataga
cctggggagaccagcgccagacaggcagccacagtggcccggctgctcggggtggcagag
tgcgtgcagaccaccctcttgctgggcgcattgcctgggggacttgcggccactctggcc
accccctccatctctttgtacacaaacaggatactgccttggagctggcgagggacctcc
ctgcatgttgctgctgctaactctgcggccttcactctgcccactggccccctctgctcc
ccggagcacccacaggagccggtgaacatcaggacgatgagcttcccaaaaagccccttt
ccgacaggaggcggctttgatgtcagcagaactgtgggcggtctgagtctgagcagcccc
agggcaaggctcattcccatgaagaacctgtcagagaaggccgagatcctattgccccgg
cctgcagaaggacacacctcaccaaccgtgttgaacttgaccggggccaaggttctttgg
gtgaatgtgaccacaagggcatcagctctggggatccggctgcactggggacctggcatc
ccactcacgctcagcctgggctatggctaccaccccaacgccaccaaccacgaggcccaa
acctgcctgacaccagcggctgctccagatgagccagccacgtggatcctgggcccggaa
gagctgcccttcagggcaggcgtctactacctgagtgtggcccccgagtctggcctggag
cccgcccctgtcgaggacctcaccgttagggtcaccaccttcctgccccactgtgtgttc
tgggatgaggtccaggagacttgggacgactctaggtgccaggtggggttgaggaccatg
cactcaaggatgccctgcctctgctgccacctcaccttctttggaagcaccttcctggtg
atgcccaatgtggtcggcgtccgccaggcggcagagctctttgccaccttcgaggacaac
cccgtggtggtgagcgctgtgggctgcctctgcgtgctctatgtgctggcgcagatctgg
gccaggaggaaggatgtgcaggaccaggccaaggtgaagctcacagtgctggaggacaac
gatccctttgcccagtaccactacctggtaagggtctacaccgggcagtggcgagggatg
gccacctcctccaaggtgaccatcaccctgtacggccgggatggagagagcaagccgcac
cacctggagggccctttgtcccctgggtttgagcgtggaggagtggacatcttcctgctg
tccaccctgttccccctgggggaactgtggcccctccggctgtggcacgacaactcggga
gactggccgtcctggttcgtgagtcaggtgctggtccatgaccctgcgacgggccagaag
tggtatttcctctgcaactcatggctgtccatcgatgggggagactgtgtcctcgacaag
gtgtttcccgtggctgcagggcaggacaggaaacagctcagccatctgttctttatgaag
atgtccacaggcttccaggaaggccacctctggtactccatcttcagcagctcagcttgg
agccgcttcacgcgggtccagagggtgtcctgctgcttctccctgctcctctgcaccatg
ctgaccagcatcatgttctggggggtccccaaggaccccgctgagcagaagatggacttg
ggtgacattgagttcacgtggcaggaagtgatgatcaggctggagagctccctgctcatg
ttccccatcaacctcctgatcgtccagatcttccagcatgcctggcctcggggtgcgaag
gcacaggatgctgggacccccagcccagccccgtcaccacagcccctagacgatggcctt
gtgacacctgaagcagacacatggcgactcgtcagctcgctgtgcagagccctgaagctg
ccgcccccggcctcgggctgggactctctgagctcgatggacatcaacacgctgctggcc
ttggtggaggacgtcatttgccctcagaacccagtggaccggggctgccaggaggaagcc
agggagagagaggatcctttcagcctggccctggagtctgcgccagtggaaggcagctgg
gtcagcacctgccagtatggcacagtggaaacagctgctgatgccagcaagcactggatc
ctcaggctgccaacacagcctgacccacgcctgctgtggggactgccggtgtccttcctc
ataggtccctgtgccttcttccgggcacgaagacacagcagcagcgacgtctaccagccc
cctctccccgccaccatcgagaagatgaaagccacctggctgaagaagcagaaggcgttt
gccctcatcacggagaccctggtgtacctgggcttcctatggatgctgctgctggtggcc
tacgggcagcggngaccaagtgcctaccacttcaacaggcacctcgagcgaagcttcacc
agaggcttttcagacgtgctgggcttccaagagttcttcgagtgggccaacagcaccctt
gtgaacaacctgtacagtctgcaccgaggcttcctcacggatgggagctccaagctggtt
ggcagcgcccacattcgccaagtgagtgtccgggaaagctccttagctccttccctctcc
ccctgcagcttcggggcttcgctgcacggatacatgccggatgcccgtgcgctgtattcc
ctggaggaggaagaccggccggcctacaatggggaaggctggaacacctccgccctcaac
agcagcactcgctttccccaggcctggcagtaccaagaccagagccagcgccaaggctcc
ccaacatgaggcaagctggctctgcaccccagaggaggctacgtggtccctctggggaga
gagcgccagggcgcggtgagagtcctccactatctctttgaccacacctggctggacacc
ctgagcagggccgtgtttgtggagttcactgtctacaatgccagtgtcaacctgttctga
gtcgtcaccctcacgctggagaccagtggcctgggaaccttcttcacccacgcggccctg
cacagcctccgcctgtcccccttcaccgacgcctggcggccctttgtgttggcagctgag
ctcctgtacttcgccttcctcctctactacatggtagtgcagggccagcgcgtgcggcag
cagaaatgcggctatttctgcagcaagtggaacctgctggaactggccatcatcccggcc
agctggagcgcccaggccgtgtttgtgaagagggccgtcctggcggagcgcgacctccag
cgctaccggaaacacagggaagcttaaatcgaccttgtcccctgtcccccgccctccgcc
gcccttggagacatcattgccttcctgatcctcccatccacagggaagctttggcatctg
cttaggttaaaccccaaaatgaacctgatcacatcagccctacaccacgcctggggtgac
atttcgggcttcatcatcgtcatccttgtcatgctcctgccttattccatcgcatcaaac
ttgatgtttggttggaaactccattcctacaaaaccctctttgatgcagtggaaacgatg
atcngccttcagctaggaatcttcaactatgaggaggtcctggactccagcccagtgctt
ggctccttcctcattgggtcgtgcgtcatttttatgacgtttgtggttctgaatctgttt
atctctgtcatcctggtggccttcagcgaggagcagaaacgtgctcagctgtcagaggaa
gcagaaattgtggatttgctcctgatgaaaatactcagtttcctgggcatccagtgcaaa
agagaggtgcctcagagtggccctgagcagcccttgttgcccttcacagctcggtgccct
gggccagcacaagcttcacctgggatttaa
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integrated database retrieval system
